Oncorhynchus keta (chum salmon): 118400669
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Entry
118400669 CDS
T09424
Name
(RefSeq) WD repeat-containing protein 18-like
KO
K14829
pre-rRNA-processing protein IPI3
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oke03009
]
118400669
Ribosome biogenesis [BR:
oke03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
118400669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
NBCH_WD40
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
WDR55
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_Vps41
Beta-prop_DCAF12
WDR54
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
118400669
NCBI-ProteinID:
XP_052331203
LinkDB
All DBs
Position
22:39746205..39856864
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AA seq
263 aa
AA seq
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MGKPKEISQDLRDSFYCGYIYFCTCFLQHLHKDQLQQKIVCPGIVACLIASPNGLYLLAG
IAEAIYFWEVSTGNLLAILNRHYQDLTCLRFTDDSSHFISGGKDNLALVWSLASVVQLDP
SLTPEPRHVLCRHSLPITDIHCGLMGPQSRVATASLDQTVKLWELSSGEMLLSVLFDVGI
MSVTLDPCEYCLFCGGSDGGIVQVSLCSQSLSRDKTFQSDNEGNQVFKGHRQLVTCLSVS
MDGTLLLSGSHDDTIRLWDIQSK
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaccaaaagaaatcagccaagacctcagagactcgttttactgtggatatata
tacttttgtacctgtttcctccagcatcttcacaaggatcaactgcagcagaaaatcgtg
tgtcctgggattgtggcatgccttattgcttcccccaatggcctgtacttgctggcaggc
attgctgaggccatctacttctgggaggtctccactgggaatttgctagccatcttgaat
cgccattaccaagacctgacctgccttcgcttcactgacgacagcagccattttatctca
ggaggcaaagacaacctggcactggtctggagtctggccagtgtagttcagctggaccca
tcactcacccccgagcctcgccatgtcctgtgccgtcactctctccccatcactgacatc
cactgtggcctgatgggaccccaatctcgagtagctactgcatccttggatcagactgtc
aagctatgggagctatcctcaggtgagatgctcctgtctgttctctttgacgtgggcatc
atgtcagtgacccttgacccctgcgagtactgcctcttctgtggcggtagcgacggcggt
atagtccaagtgtccctctgcagccagagcctaagtcgggataagacattccagtcggac
aacgagggtaaccaggttttcaaaggacacaggcagctagtgacctgtctgtctgtgtct
atggacggcactctcctcctctcggggtcccacgacgacaccatacgactgtgggacatc
caaagcaagtag
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