Oncorhynchus keta (chum salmon): 118400704
Help
Entry
118400704 CDS
T09424
Name
(RefSeq) cysteine protease ATG4B-like isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04136
Autophagy - other
oke04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118400704
04136 Autophagy - other
118400704
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oke01002
]
118400704
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118400704
03029 Mitochondrial biogenesis [BR:
oke03029
]
118400704
Peptidases and inhibitors [BR:
oke01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
118400704
Membrane trafficking [BR:
oke04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
118400704
Mitochondrial biogenesis [BR:
oke03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
118400704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
118400704
NCBI-ProteinID:
XP_052331489
LinkDB
All DBs
Position
22:52207054..52234037
Genome browser
AA seq
431 aa
AA seq
DB search
MDAATLTYDTLGFGEFEDFPETSEPVWILGKEFNALTEKEDILADVTSRLWFTYRKNFPP
IGGTGPTSDTGWGCMLRCGQMILGEALVCRHLGRDWRWVRGQPQRGQYISILNAFLDKKD
SYYSLHQIAQMGVGEGKAIGQWYGPNTVAQVLKKLTVFDSWSCLAVHVAMDNTVVMEEIK
RLCMPWLDYGGAACAEPLGWMPKHNGCPEGACALAEEETALWKPLVLLIPLRLGLSDINK
AYIETLKQCFQLPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPCEDSQVPDD
TYHCQHPPCRMHICEIDPSVAVGFFCRTEDDFDDWCMRIRKLSHTRGSLPMFELVDCQPS
HFACSVDVLNLTPGEAGIQSEVRCGQAHCTTDKAPFKGNFPDVRGDRVHDFSDRSERFFD
SEDEEFEILSL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagctactctcacgtacgacacacttggctttggagagtttgaagattttcca
gagacctcagagccagtgtggatcttggggaaagaattcaacgcactcacagaaaaggaa
gacattcttgcagatgtcacttcacgactatggttcacctacagaaaaaacttcccgccc
attggagggacagggcctacgtccgacacaggctggggctgcatgctgcgatgtggacag
atgatcctaggcgaggccctggtctgcaggcatctaggccgagactggagatgggtgaga
ggccagcctcagagaggacagtacatcagtatcctcaacgccttccttgacaagaaagac
agctactattctttacatcaaattgcccagatgggagtcggggaggggaaggctataggc
cagtggtacggacccaacacagtggcacaggtactgaagaaactaactgtgtttgactcg
tggagttgtctggcggtacatgttgctatggacaacaccgtggtgatggaggagatcaag
cggttgtgtatgccctggctggactatggtggagcagcgtgtgcagagcccctggggtgg
atgccaaagcataacggctgcccggagggggcctgtgccctggctgaggaggagacggct
ctctggaagcccctggtccttctcatccctctcaggctgggcctgagcgacatcaacaag
gcctacatcgagaccctgaagcaatgctttcagctgccccagtccctgggtgtcatcgga
gggaaacccaacagtgcccattacttcataggctatgttggagaggagttgatctacctg
gacccccacaccacccagcctgcagtagagccctgtgaggacagccaggtccccgacgac
acttaccactgtcagcatccgccgtgccgcatgcacatctgtgaaatagacccctccgtc
gcagtgggtttcttctgccgaacggaggacgacttcgatgactggtgcatgcgtatccga
aagttgtcccacactagaggaagcctgcccatgtttgagctggtagactgccaaccatct
cacttcgcctgctctgtagacgtgctcaacctcactccgggtgaggctgggattcagtca
gaggtgcgttgtggacaagcgcattgcactaccgacaaagcgccttttaaaggcaatttc
cctgatgttcgcggagatcgcgttcacgatttctcagaccggtcggagcgcttctttgat
tctgaggatgaagagtttgagatcctgtccctgtga
DBGET
integrated database retrieval system
