Oncorhynchus keta (chum salmon): 118400883
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Entry
118400883 CDS
T09424
Name
(RefSeq) caldesmon-like isoform X1
KO
K12327
caldesmon
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
118400883
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oke04812
]
118400883
Cytoskeleton proteins [BR:
oke04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
118400883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
118400883
NCBI-ProteinID:
XP_035653761
LinkDB
All DBs
Position
22:2551171..2609523
Genome browser
AA seq
712 aa
AA seq
DB search
MDDDFDQRMELRRQRREQMRLDAEKGFSTTDDDEEAARERRRNAREERMKKAEMEESSSS
TVTTEVNNTHSVTETESSSTGAEVSSSAGDGDDVVLLDRLAKREERRQKRLKEALDRQKE
FDPTITDGNENSQEETFPSGRHHGTEEEKEEKPAQEEVTTNSWSREEEKEEEATPKEEEP
EPVTEPERAEEVEKEKKEEDIEETQIVQEKCIEFVVPAAPLQECGFEISIMPKMAVEDKS
VDEISKKEEEEKQKKELEEKEAAAKLKKEAEEKVEKERKEAEEKAAKLKKEEEEKAAKLK
KEEEKAAKLKKEEEKNAQLRKEAEEKEKAVNLKKEAEEKEKAVNLKKEAEEKEKAVKIKK
GEEEEKAAKLKKEAEEKAKKSKQAEEKNKVEEEKSKKREAAKVELEKPKLRSVRKDEKES
SLSKQQNGGVARSAEDQERLEAERKLEELKRRRDEADSEEFEKMKQKQHESEAELEELKK
KREGRKKVIEEEEKQKKAELAEKKAKEQEERKRLKEEIEQRRKDAAEKKKQMIEESGDGD
KKPFTLGVTPKGKIGERAEFLNQRAQKGCKTSHAPIVSKIGNRLDLYTAAVQTNRDVRSP
KSPVSDLPETPSIRNIKSMWEKGNVGVATESPKPMNKDAADIKVGVAGLTKGWGKSPADT
GKAAAAAAEKADDLKPVDVGNKRSLWETKGSSPAKVTVGGKNKSVTNAGVGR
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgactttgaccagcgcatggaattgaggaggcagaggcgtgagcaaatgcgt
ctagacgcagagaagggcttcagcacaactgatgatgatgaggaggcggctcgcgagcgt
aggagaaacgctcgtgaggaacgaatgaaaaaggcggagatggaggagtctagcagcagc
accgtgacaacagaggtcaacaacactcacagtgtgacagagacagagtcctcctccacc
ggtgcagaggtgagctcctcagcaggtgatggggatgacgtggtactcctggaccgcctg
gccaagcgggaggaacgcagacagaagaggttgaaagaggcactagatagacagaaggag
ttcgaccctaccatcaccgatggtaatgagaacagccaggaggagaccttccctagcggg
cgccaccatggcacagaggaggagaaggaggagaaaccagcccaggaggaagtaaccacc
aactcctggagtagagaggaggagaaagaagaggaggcgacgccaaaggaggaagagcct
gaacccgtcacagagcctgagagagctgaggaggtggagaaagagaagaaagaggaagac
attgaagaaacacaaatagtacaagagaaatgtattgaatttgttgtacccgctgcacca
ctacaagagtgcgggtttgaaatatcaattatgcccaagatggcagtagaggataaatct
gttgatgagatctctaagaaagaagaggaagaaaaacagaaaaaagagttggaagaaaaa
gaggctgccgcaaaactcaagaaagaggctgaggaaaaggttgaaaaagaaaggaaagaa
gctgaagagaaagctgcaaaacttaaaaaagaagaggaagagaaagctgcaaaacttaaa
aaagaagaggaaaaagctgcaaaattgaagaaagaagaagaaaaaaatgcacaactcagg
aaagaggctgaagaaaaagaaaaggctgtaaacctgaagaaagaggctgaagaaaaagaa
aaggctgtaaacctgaagaaagaggctgaagaaaaagaaaaggctgtaaaaatcaagaaa
ggagaagaagaagaaaaagctgcaaaactcaagaaagaagctgaagagaaagctaaaaaa
tcaaagcaagcagaggaaaaaaataaagttgaggaggaaaagtccaaaaagcgggaggct
gcgaaggtggagttggagaaaccgaagttaagatcagtgaggaaagacgaaaaggagtcc
tccctctccaagcagcagaacggcggtgtggcgcgctccgccgaggaccaggagcgcctg
gaggcggagcgtaagctggaggagctgaagcggcgtcgtgacgaggcggacagcgaggag
tttgagaagatgaagcagaaacagcacgagtctgaggccgagctggaggagctgaagaag
aagagggaggggaggaagaaggtcattgaggaggaagagaagcagaagaaggcagagctg
gctgaaaagaaggccaaggagcaggaggagaggaagaggttgaaggaagagatagagcaa
agaagaaaagacgctgcagagaagaagaaacagatgatcgaggaatcgggcgacggagac
aagaaacccttcacattgggtgtcacgcccaagggcaagattggggagagagcagaattc
ctgaaccagagagcccagaaaggctgtaagacatcacatgctcccattgtctccaagata
ggcaacagactggacctatacactgctgcagttcagaccaaccgggatgtgaggtctcct
aagtctccggtctcagacctgccagagacaccaagcatccgcaacatcaagagcatgtgg
gagaaagggaacgttggggtggccactgaaagccccaagcctatgaataaggatgctgct
gatattaaagtgggtgtggctggactgaccaaaggctggggcaagagcccagcagacact
ggcaaggcagctgcagccgcagctgagaaggctgacgacctgaaacctgttgatgtgggc
aacaagcgcagcctatgggaaacaaaaggctcctcccctgctaaggtgacagttggaggc
aagaacaaatctgtcacaaatgcaggtgtgggccgctaa
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