Oncorhynchus keta (chum salmon): 118400914
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Entry
118400914 CDS
T09424
Name
(RefSeq) nuclear receptor subfamily 2 group C member 1 isoform X1
KO
K08543
testicular receptor 2
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118400914
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oke03310
]
118400914
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
118400914
Nuclear receptors [BR:
oke03310
]
2. Hepatocyte nuclear factor 4 like
2C. Testicular receptor
118400914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
118400914
NCBI-ProteinID:
XP_035653809
EnsemblRapid:
ENSOKEG00005008371
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Position
22:complement(1748600..1770565)
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AA seq
619 aa
AA seq
DB search
MDRQTQRIQLVSADGGMMGHRIQIVTDQSTGQKIQIVTALEQGSGGKQQFILANADYSTA
GKVILAKQEASSPGKVILAAPDGSGVNQLLFASPDLAGQQIQFVTEGSDQALSKPVVEYC
VVCGDKASGRHYGAVSCEGCKGFFKRSIRKNLVYTCRGSGECVINKHHRNRCQYCRLQRC
MVLGMKQDSVQCERKPVEVSREKSINCAASTEKIYIRKNLCSPLAATPTFVTDKETARYY
KETARSTSLLESSMLLNIQQPFPKLENTILLPTSPESNDPCQGDLSTLANVVTSLAHLNK
AREMSDITDGNDLMGVDDTLSNGDSSMTDLQGDEQTASDITRAFDTLAKALNPGDGSAGD
SLEATLQLMSGDQSGPVVELEGPLLSDSHVPFKLMMPLPMPEYLNVNYICESASRLLFLS
MHWARSIPAFQALGGLDNDINLMKACWNELFALGLAQCANVMNVATILAAIINHLQTSLQ
EEKLSPERVKLVMEHIWRMQEFCNSMAKLSPDSYEYAYLKAIVLFSPDHPGIDNTLQIER
FQEKAYMELQDYVTRTYPEDSYRLSKLLLRLPALRLMSAAVTEELFFAGLIGNVQIDSII
PYILKMESTDYNSQVATGV
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggacagacagactcagaggattcagctggtgtcagctgatggtggcatgatgggacac
cgtatccagattgtgacagaccagtccacgggccagaagatccagatcgtcactgcattg
gagcagggttctggtgggaagcagcagttcatcctggctaacgcagactactccacggca
ggcaaggtaatcctagccaaacaagaggcctcgtccccgggcaaggtgatcctggcggcc
ccagacggttcaggggtaaatcagctgctgtttgcctcccctgacctggctggccagcag
atccagtttgtgacagaagggtcagaccaggccctttccaagcccgtggtggagtactgt
gtggtgtgtggagacaaggcctcaggtcgtcactatggggcagtgagctgtgagggctgt
aagggtttcttcaagcgcagcatcaggaagaacctggtttatacatgccgggggtccgga
gagtgcgtcatcaacaagcaccacaggaaccgctgtcagtactgcagacttcagcgctgc
atggtcctgggcatgaaacaggactccgttcagtgtgagaggaagccggtggaggtatcc
agagagaagtctatcaattgtgctgcatctacggagaagatctacatcaggaagaacctg
tgtagtcctctggctgccacgcccaccttcgtcacagacaaggaaaccgccaggtactac
aaggagacagccagatcaactagtttgctggagtcgagcatgctcctcaacatccagcag
ccattccccaagctggagaataccatcctgctcccgacatcccctgaatcgaatgaccca
tgtcagggtgacctgagcaccctggccaacgtggtgacatcgctggctcacctgaacaag
gcccgggagatgagcgacattacagacggcaatgacctaatgggtgtggacgacaccctt
agcaacggagacagctcaatgacggatctccaaggagacgaacagacggccagtgacatt
acgcgagcgtttgacaccctggccaaggccttgaatcctggtgatggctcagcgggagac
tctctggaggccacgttgcagttgatgtcaggggaccagtcaggccctgtggtggagctg
gaggggccccttctctcagacagccacgtccccttcaagttgatgatgcctttgcccatg
cctgagtacctaaacgtgaactacatctgtgagtcggcctcaagactcctcttcctgtcc
atgcactgggcgcgctccatacctgcatttcaagccttgggtggtctcgataatgacatt
aacctgatgaaggcgtgttggaacgagctgtttgctctgggcctggctcagtgcgccaac
gttatgaatgtcgccaccatcctggctgccatcatcaaccacctgcaaaccagcctacaa
gaagagaagctgtccccagagcgagtgaagctggtgatggaacacatctggaggatgcag
gagttctgtaacagcatggccaaactgtcccctgactcgtatgaatacgcctacctcaaa
gccatcgtcctctttagccctgaccacccaggcattgacaacaccttacagatcgagcgg
ttccaggagaaggcttacatggagctacaggactatgttaccaggacctacccagaagac
tcctatcggttatccaagctgctgctgcgtctcccggccctgcggctgatgagtgcagcg
gtgacagaggagctgttcttcgctggcctcatcggcaacgtgcagatagacagcatcatc
ccgtacatcctcaagatggagtccaccgactacaacagccaggtggccactggagtctga
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