Oncorhynchus keta (chum salmon): 118400983
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Entry
118400983 CDS
T09424
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118400983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oke03021
]
118400983
03036 Chromosome and associated proteins [BR:
oke03036
]
118400983
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118400983
Coactivators
SAGA/TFTC/STAGA complex
118400983
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
118400983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
118400983
NCBI-ProteinID:
XP_035653943
LinkDB
All DBs
Position
22:complement(7334772..7363460)
Genome browser
AA seq
1003 aa
AA seq
DB search
MAGASDPLEDMLFNEVDEKAVSDLVGSLESQLVSQKTPATFSDIKREGSTGTVSQFSGKV
RDQVGSLEPPQQGHPKAVLNAEPCANQAISNKSITASTSSITTGGIINAGTNLQAHGAAS
RIISPAPPGSVTLPAQTTSYNRGTVLAPAETSAVTAPNSNLTTTTAIRTPSPGLQSFNGS
SGAVKLVNSPAAAPQIGLGGNTVISTASAGNSNIIVSMASQPPSLPNYPVSQSAVAFVTP
TVALQRHPNPMASASQNGVIDPKVSAVVTQGAGSPGATTSQVMNRNNTLINTTMVAPNQP
VSAGQSIILGGSPSPVVVNSPISQAQSVASPTLAAGVKPTVNGVGQPTVTIVRPPGAPVM
ATSVQQQRPGLVASPTRTVAPQMVVRPPQQTTIQLPPGFTIPPGMVLVRTDTGQLVMVPQ
QVLAQAQAKTQQGQAAVSNICPRPATPTAGTTIRVSTPSQAPCTTQAVRLASPVQARMLQ
SPSPTSSAIQKAITVAPAGASVSVKMTTPQKAQTVITGGQALAKPGAVRPSITFNTAAAA
SASTTPTMVTAPVSQEMQENVKKCKNFLSTLIKLASHNSPSPDTSKNVKALVQDLLDAKI
EPEEFTTRLQAELKSSPQPYLIPFLKKSLPALRLSLLNNQQTLLASTNASALAAASTTTT
SAIRARLPTTVSPATGIVRTPTTSLGVRRPGVQGVQTRMPMVIPQTIRPQGTVARGLTII
AGRSPVGIGAQASANQKKLNEPGGGTFRDDDDINDVASMAGVNLNEENARIMATNSELVG
TKIRSCRDEAFLPPGLLHRRIMETAKRFGVTEVPAEAVNYISHATQARLRSVLEKVSTIA
QHRTDGGKDEEWYEPSTDVRAQLRFFEQLDRMEKQRKDEQEREVLIKAAKSRARQEDPEQ
ARLKAKAKEMQQAEQAQIRQREANLTALAAIGPRKKRKMDSPGSSTSGTEVALGSGAGSS
TAASSRQQLRQRITRVNLRDFIFCLEQERVTSRSLLLYKALLK
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcctccgacccactggaggacatgctcttcaatgaggtagacgaaaaagca
gtaagtgacttagttggctctttggaatcgcaacttgtcagccaaaagacgcccgccaca
ttttccgatatcaaacgagaaggatctacgggcactgtcagccagttctcagggaaagtg
cgtgatcaagtggggtctctggagccgccacaacaaggacacccaaaagcggtgttaaac
gcggaaccctgcgcgaatcaggcgatttcgaataagagtatcaccgcttctacctcttcc
atcactactgggggcattataaacgctggtaccaatttacaagcacatggagccgcatct
cgcatcatttctcccgcaccaccaggatcggtaactttgcctgctcagacgactagctac
aacagagggactgttttggctccagctgaaacatcggcggtgacggctccgaactcaaac
ctcacaacaacaacggctatcaggactccttcacctggattacagagttttaacggtagc
tccggagctgtgaagttggtcaactcgccagctgctgctccccaaatcgggttaggcggc
aacactgttataagtactgccagtgcgggcaactcaaatatcattgtgtctatggcttca
cagcctccttctctaccaaactatcctgtatctcaatctgctgtggcatttgttactccc
actgttgcattgcaaaggcatcccaaccccatggccagtgcctcacagaatggagtaata
gaccctaaggtttctgcagtggtcacacagggtgcaggttctccgggggccaccacctct
caggtcatgaaccgcaataacactcttattaacactacaatggtggcacccaaccagcca
gtctctgctggccaatcaatcattctcggagggtctccctctcctgttgttgtgaactca
cccataagccaggcacagagtgtggcgagtcccactctcgcagcaggggtgaaaccaacg
gttaacggagttggtcagcccactgtgaccatcgtgaggccccccggtgctcctgtgatg
gccacctccgtgcagcagcagagacctgggctggtagcgagtcccacgaggactgtggca
ccacagatggtcgtcagaccaccacagcagaccaccattcagttaccccctggatttacc
atacctcccggtatggtgctggtgcgtacagacacaggccagctggtaatggttcctcag
caggttctagcccaggctcaggctaagacccaacaaggccaggctgctgtctctaacatc
tgcccccggcctgccacacctaccgctgggaccaccatcagagtcagtactcccagccag
gccccttgtacaacccaggctgttcgtctggcctcccctgtccaggccagaatgttgcag
tccccctctcccaccagctctgctatacagaaggcgataaccgtggctcctgcaggtgcg
tctgtgtcggtgaagatgaccacccctcagaaagcccagacagtgatcacagggggtcaa
gccctggccaagcctggagctgtacggccctctataacctttaacactgcagcagcagcc
agtgcctccacaacccctacaatggtaactgcaccagtctcccaggaaatgcaagaaaat
gtgaagaagtgcaagaacttcctgtccaccctgatcaagctggcgtcccacaactcccca
tctccagacacatccaagaacgtcaaggccctggtgcaggatcttctggatgctaaaatc
gagcctgaggagttcaccacacgtctgcaggctgagctgaagtcctctccccaaccgtac
ctcatccccttcctcaagaaaagccttcctgccctgcggctgtccctgctcaacaaccag
cagactctgctggcctccaccaacgcttctgccctggccgctgcctccactactaccacc
agcgctatcagggcccggctccccaccaccgtcagccccgccacaggcattgtcaggaca
cccaccacttctctgggtgtgagaagaccaggggttcagggggtccagactcgcatgccg
atggtcatccctcagaccatccggccacaaggcacagttgcaagaggactcactattatt
gcaggcagatcccctgtgggcattggtgcccaggcctctgccaatcagaagaagctgaat
gagcctggaggcgggacgttcagggatgatgatgacatcaacgacgtggcgtccatggcg
ggggtgaacctgaacgaggagaacgcccgcatcatggccaccaactctgagctggtgggc
accaagatccgctcctgtagggacgaggccttcctcccaccaggcctgctgcacagacgc
atcatggagaccgccaagaggtttggggtgacagaggtcccagctgaggcagtgaactac
atctcccatgccacccaggccaggctgagatccgtgctagagaaagtgtcaactatcgcc
cagcaccgcactgacgggggcaaggatgaggagtggtatgagccgtcgacagacgtcagg
gcccagctccgcttctttgagcagctggacaggatggagaaacagaggaaggacgagcag
gagagggaggtcctaatcaaggctgccaagagtcgcgccaggcaggaggacccagagcaa
gctcggttgaaggcgaaagctaaagagatgcagcaggcggagcaggcccagatccggcag
cgtgaagccaacctcactgccctggctgccatcggtccccgcaagaaacgcaagatggac
tcgccagggagctccacatcgggcacagaggttgctttgggttcaggggccggctcttcc
acagccgcctcctcccgccaacagctccgtcagcggatcacgcgagtcaatctcagggac
tttatcttctgcctggagcaggagagagtcacatcccggtccttactgctctataaggct
ctcctgaagtag
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