Oncorhynchus keta (chum salmon): 118400985
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Entry
118400985 CDS
T09424
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit-like
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04010
MAPK signaling pathway
oke04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118400985
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
118400985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118400985
Transcription factors [BR:
oke03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
118400985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank
Ank_2
Ank_4
Ank_3
Ank_5
Death
Fimbrial_CS1
Motif
Other DBs
NCBI-GeneID:
118400985
NCBI-ProteinID:
XP_035653949
LinkDB
All DBs
Position
2:44314618..44325239
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AA seq
914 aa
AA seq
DB search
MSGALRMDEAQYSMKMIENELMMNLSYEFMPPVDVKIEPYVPETAHGPYIQIIEEPKQRG
FRFRYECEGPSHGGLPGASSERNRRTYPTVKVSNYVGIARVEVQLVTHSDPPQVHAHSLV
GRQCCTESGICSMDVGPNDLTAQFSNLGILHVTKRGVGEVLCKRLRDEKRRQGGQHYHFT
DAEEHAIGREAKELGKIMDLNIVRLKFTAYLQDSNGGFSRALKPVVSNPIYDSKSPNASN
LKISRMDKTSGSVLGGDEIFLLCDKVQKDDIEIRFYEEDDGSWEAFGDFSPTDVHKQYAI
VFRTPPYHSAEIERQVTVFLQLKRKKGGDCSDPKQFTYVPRVQDKEEVQRKKQKPFSYND
QWRGPLGGAGGAGRGAGGFGGGAGGGSGFQFNQQMNGTGWMGGGFSGFGGGGAQMSGTTA
QAEGTQQQQAGGMAGQTPGQTSSPLQQQLFQIAATLQSRATQMSKQTAGALLQYCTTGDV
RVLLAMQRHLCGVQDKNGDTPLHLAIIHQQSAVTQQLVHTLLTIQQHKVLNKLNHLGQTP
LHLAVITRQVKVVDVLLRAGADPTLLDRDGRTALHLAALAGDDVTLRVLLGHLGERYLHL
VNMADYHGLHPLHLAVCKGGERCLRLLVEGGAKINAPEQKSGCSALHLAVRENYFKVACT
LITELKADVNMCTFGGNTPLHLAASRSSPPLCSMLIAAGADKNLENDEPLFFSSSSSDEE
QEDGPVRDFREPAIQPLPNTTPLSEGEQVNPRKRSATGHTPFDLAKCHKVRNLLDTRQSP
KPSQQSSKKPKPSSVEERGQLDSETLSKLCELFSLNDVPWRQLAEKLNMLSLAHLYQESP
LPCHNLLENYQLGGGPVEGLVEALQSLGLTEGVRLLRQAELREEDKQNTDQTVDSGFASQ
PMEEEMEEPALANQ
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagcactgagaatggatgaagctcagtacagcatgaaaatgattgaaaatgag
ctgatgatgaatttgtcctatgagttcatgccccctgtggatgtcaagatcgagccctat
gtaccggagaccgctcatggaccctacattcagatcattgaggagcccaaacagagaggc
ttcagattccgctatgagtgtgagggtccgtcccacggtgggctcccaggggcctcaagc
gagaggaacaggaggacctatccaactgtcaaggtgtctaactatgtggggattgccagg
gtggaggtgcagctagtgacccactcagaccccccccaggtccatgctcacagtctggtg
gggaggcagtgctgcacggagagtggcatatgcagtatggatgtgggcccaaacgacctc
acagcacagttcagtaacctgggcatccttcatgtcactaagagaggggtgggggaagtg
ttgtgcaagagactgagagatgagaagaggaggcaaggggggcagcactatcattttact
gatgcagaggaacacgccatagggagagaagccaaggagcttgggaagatcatggacctg
aacatagtgaggttaaagttcacggcctacctccaggacagtaacggcgggttctctagg
gccctgaagccggtggtctccaaccccatctatgacagcaagtcacccaatgcctcgaac
ctgaagatctcccgtatggataagaccagtgggtctgtgctgggaggagatgagatcttc
ctactgtgtgacaaagtacagaaagatgacattgagatccgcttttatgaagaggatgat
ggaagctgggaggcctttggtgatttctctccaactgatgtccacaagcagtacgccatt
gtgtttaggacgccgccgtaccacagcgccgagatcgagcgtcaagtcactgtattcctc
cagttgaaaaggaagaaaggcggtgactgcagcgaccccaagcagtttacctacgttccc
cgagttcaagataaagaggaggtgcagcgtaaaaagcagaagcccttctcctataatgac
caatggagaggacctctgggaggagctgggggtgcagggagaggggccggaggattcgga
ggcggagcaggtggcggtagcggcttccagtttaaccagcagatgaatggaacggggtgg
atggggggtggattctctggttttgggggcggtggagcccagatgtcaggcaccactgcc
caggctgaggggacccagcagcaacaggcaggagggatggccggacagacgccaggacag
acatcctcaccactacaacagcagctcttccagattgctgccactctccagagcagggcc
actcagatgagcaagcagacagctggggctctactacagtactgcaccactggggacgtc
cgggtccttctggcaatgcagagacacctatgtggggtccaggataaaaacggagacacg
cctttgcacctggccatcattcaccagcagtcagctgtgacccagcagctggttcataca
ctcctcaccatccagcaacacaaagtcctcaacaagctcaaccacctcggccagactcct
ctccatctggcggtgatcaccaggcaggttaaggtggtggatgttctcctccgggccgga
gcagatcccaccctgctggaccgggacggccggaccgccctgcacctggcagcgctggct
ggggacgacgtcacactccgggtcctgctgggccacctcggagaacgctacctccacctg
gtcaacatggctgactatcatggtctccatcctctccacctggctgtttgtaagggagga
gagcgctgtctgcgtctgctggtggagggcggggctaagatcaacgccccggagcagaag
agtggatgctccgccctccacctggctgttagagagaactacttcaaagtggcctgcact
ctcatcacagagctgaaagcagatgtaaacatgtgtacgtttggagggaacactcctctc
catctggccgccagtcgcagctccccccctctctgctccatgctcattgctgcaggagcc
gacaagaatctggagaacgacgagccgctcttcttcagctcctcctcgtcagatgaggag
caagaggatggaccagtaagagatttcagagagccggcgatccaaccgctaccgaacaca
acgccactttcagagggagaacaagtcaaccctcgtaagaggtcagcaacaggacataca
ccctttgacctggctaaatgtcataaggtgagaaaccttctagacaccagacagagtccc
aagcccagtcaacaatcaagtaaaaagcctaaaccgagcagcgtggaagaaagagggcag
ctagacagtgagacgctaagtaagctgtgtgagctcttcagtctgaacgatgtgccctgg
agacagctcgcagagaaactcaacatgctctcactggcacacctatatcaggagagtccc
ttgccctgtcacaacttgctggagaattaccagttgggtggtggtccagtggaaggcctg
gtggaagctctacagtctctgggtctgactgaaggagtgagactgctgagacaggctgag
ctgagagaggaggacaaacaaaacacagatcagacggtggacagtggctttgctagtcag
ccaatggaggaggagatggaggagccagccttggccaaccagtga
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