Oncorhynchus keta (chum salmon): 118400999
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Entry
118400999 CDS
T09424
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04510
Focal adhesion
oke04512
ECM-receptor interaction
oke04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118400999 (lamb4)
04518 Integrin signaling
118400999 (lamb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118400999 (lamb4)
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Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
LAMB1
EGF_LMN_ATRN
LAMB4
Laminin_I
DUF3375
Motif
Other DBs
NCBI-GeneID:
118400999
NCBI-ProteinID:
XP_035653977
LinkDB
All DBs
Position
22:complement(8287353..8308605)
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AA seq
1788 aa
AA seq
DB search
MVSLFLLVLLVPGALLQEDCDVNSCHPQLGDLMVGRAAQLSASSTCGRNGPQNYCILGYL
EDEQKCFKCDSRQPYNLYNNQNSHQIENVITTFGPERKMKWWQSENGVHQVSIRLDLETL
FQFSHLVLTFKSFRPAAMLVERSKDYGYSWKVFRYFAEDCASHFPGVSQGPADSTDDVVC
DSRYSASEPSTDGEVVLKALDPSFDIENPYAPHIQEQITLTNLRVNFTHLFTLGDTLLGR
KKRNPQEKYYYALYEMVVRGSCFCNGHASMCMPVDGTRGDVLNEPGVIHGRCVCQHNTVG
TNCERCQDFYNDVPWRPAAQSDPHVCRRCNCHGHSETCHFDIDQYQASGGVSGGVCDGCR
HDRMGPQCERCRPYLYQDPQLSMEDPRGCISCDCDLTGSLDNGLCDPVSGRCVCKENVAG
DRCDRCKFGFYGFSQEDPTGCQRCRCNSLGSVLTPYPCDQVTGQCVCQRLAMGPLCDQCL
PGYWGLGNTVHTCSPCDCDHGGAYSSTCSSLDGQCQCLPNMVGRSCGDPAPGHFLAALDY
YLYEAENAAPLEGKSSSPLLKPTDLPVCEEYYRQQGYDIKYQNGRLVLTRRSKRQARRRR
QGQRSIPLDPGSALQIVPRERTPDVPITWTGPGFVRVLDGAGLRFTVDNLPASIDYHLVI
RYEPESPDDWMASVSIVPLLAGDGGCPTSPKGEKTLTIPGAARVAILDTPVCLNAGRRYY
VDITFRKQPNSNPQSSSHTLVDSMGLIPKMESVQDFCSQSELDSFRRFRCFELAAEQETL
PDVCYGLIGSLSARIHNGAMLCRCNIQGSHGPYCSKFGGLCECKANVVGRCCDSCAPLNF
GFGPNGCAPCECDRRGAVAELCDQVRGQCPCRMEVGGRRCDRCLSGYYGFPLCRPCKCNG
LAELCDQDTGACLDCREHSTGYNCESCVEGYFGDPVSREPCKPCLCPDTQSSGRFFASTC
NKGPESGSLTCDCLAGHTGLRCDACSAGFYGDLTAPGGGCEECLCNNNIDPADSDACDSV
TGECLRCLHNTQGPRCQSCKPGYYGDALAQDCKECSCDRQGTDVTQCPLGSPCFCDPLTG
QCPCRAGAVGTLCDECATGFWNIQGESGCQPCKCDPANSFNNHCDKVTGHCQCRTEFGGR
QCDECGENHFGNPDLQCVSCDCNMEGTDRPACNPLTGECLCRIGVMGIFCDECAPGYDQV
FPACLPCHPCAVLWADNVTDVQRAAQRMRTFIPPHGEQLEPGHSRQLQRMLEMHSKLDYL
GNLTGRSLPRVKDVEKLCVIISKLKDSIDPNAIIVDSSSLLNTEIDNIHHEFKMLLDNLR
NKIGEAPTLDLKEMQEALEKIRKQHADFMADEKKVKEAERALENSMDTRQEIKDHLSSCS
ILGDMEGLEKKVKALSVAKLNKNICGGPGDEECSKSECGGALCRDFLGQRECGGPTCKGS
FPVSHNATKTAEQVENDLIDLLQKLKDSKIKINEAKQMTQGTHEQAKELQKKITDSKEKF
KKEKNDTKDLINRVKDYLTDEMVAPEDIENLVKVVLAIQLPGSPDDIRSMIQNIRGVLTN
FIDFKEDLKKLKDQAKTAQDLLEKAQAIRDRTRGIDVTDIKKTMTDTENTQDKVEQDLEK
AKESNGVADKMIKEIEKKLNNIETNLNSTRTPEMLEEIEVLKSKTEMNREQVEQAKADAD
AAIGATTDAEKGLDKVTALFDRLKTGNTNQTNNEVANERLKNITVEAEKVAKDVQEKFQQ
IDDLEKKIQDFIRNKEDKAKEVAMLLEMVEALQKEIAARVDGYINCTS
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atggtttctctgttcctgctcgtgttgctggtacccggggccctcctccaggaagactgt
gatgtcaactcttgccacccccagctgggggacctgatggtgggccgcgctgcccagctc
tccgcctcctccacctgtggacggaacgggccccagaactactgcatcctcggatacctg
gaggatgagcagaagtgtttcaaatgtgactccaggcagccctacaacctctacaacaac
caaaacagccaccagattgagaacgtcatcaccacctttggccctgagcgcaagatgaag
tggtggcagtctgagaacggggttcatcaagtcagtatccggctggatctggagactctg
ttccagttcagccatctcgtcctcactttcaagagtttccgtcctgccgccatgctggtg
gagaggtccaaagactacgggtacagttggaaggtgttccgttactttgctgaggactgt
gcctcccacttccctggggtctcacaggggcctgctgacagcaccgatgacgtcgtctgc
gacagcagatactccgcctcagagccatctactgacggagaggtggtgttgaaggctcta
gatccaagctttgacatagagaacccatatgctccccatattcaagagcagatcaccttg
accaacctgcgggtcaacttcacccatctgttcaccctgggtgacaccctactggggcgg
aagaagaggaaccctcaggagaagtactactatgccctgtacgaaatggtggtgcgcggc
agctgcttctgtaatggccatgccagcatgtgtatgcccgtggatggcacccggggtgac
gtcttaaatgagcctggcgtgattcacgggcgctgtgtatgccaacacaacactgtgggc
acaaactgtgagagatgccaggacttttacaacgatgtcccctggaggccggccgcccaa
tctgacccacatgtctgcagaaggtgtaactgtcacggtcattcggagacgtgtcacttc
gacatagaccagtaccaggccagtgggggggtcagcgggggggtgtgtgacggctgccga
cacgaccgcatgggtccccagtgtgaacgctgccgaccctatctctatcaggacccccag
ctctccatggaagaccctcggggctgtatctcatgtgactgtgacctgacggggtccctg
gataacggcctgtgtgaccccgtgtcgggccgctgcgtgtgtaaggagaacgtggcgggg
gacaggtgtgatcgctgtaaatttggcttctacgggttcagccaggaggaccccactggc
tgccagagatgcaggtgtaactccctgggtagtgtcctgaccccctacccatgtgaccag
gtgacgggccagtgtgtatgtcaacgcctcgccatgggacccctgtgtgaccaatgtctg
ccaggttactggggtctggggaacactgtacacacctgctcaccttgtgactgtgaccat
ggaggagcctacagcagcacgtgctcttcattggacggccagtgtcagtgcctgccaaac
atggtgggccggagctgtggtgatcctgccccgggacatttcctggctgctctagactac
tacctgtacgaggcagagaacgctgccccactggagggaaaaagctcctcccctctgttg
aaacccaccgacctgcctgtgtgtgaggaatactacagacagcagggctatgacatcaaa
tatcaaaatggccgcttggtcctgaccaggagaagcaaaagacaagccaggaggagaaga
cagggacagaggtccattcccctggacccaggctcagccctccagattgtgccccgggag
aggacaccagatgtaccaatcacttggaccggcccaggattcgtgcgggtcctggatggt
gctgggcttaggttcactgtggacaacctcccagcgtccatcgactaccatctagtcatc
cgctatgaaccagagtcgccagatgactggatggcctctgtgagcattgttccattattg
gctggtgacggaggttgtcccactagcccgaaaggggagaaaaccctcaccatacctggg
gctgccagggttgccattttggatacgcctgtgtgtctgaacgcgggaagaagatattat
gtggacatcacttttaggaagcagcccaactctaaccctcagtccagctcacataccctc
gtcgactcaatgggtctgatccctaagatggagtctgtgcaggacttctgttcacagagt
gagctggactcgttcagaagattccgctgttttgagttggctgctgagcaggagaccctg
cctgatgtgtgttatggcctcattggaagcttgtcggctcgcatacacaacggtgccatg
ctttgcaggtgtaacatccagggttctcatggcccctactgcagtaaattcggagggctc
tgtgagtgcaaggccaacgtggttggccgctgctgtgactcctgcgcccccctgaacttc
ggcttcggacccaacggctgtgcaccctgtgagtgtgaccgtcgcggtgcagtggcggag
ctgtgtgaccaggtcagaggtcagtgtccgtgtcgtatggaggtgggcgggcgacgctgt
gatcgttgcctgtctgggtactacggcttcccactgtgtcggccctgtaagtgcaacggc
ctggctgaactgtgtgaccaggacactggagcctgcctggactgcagggagcactccacc
ggatacaattgtgagagctgtgtggagggttactttggtgacccagtctccagggagccc
tgtaagccttgtctgtgtcctgacactcagtccagtggacggttctttgccagcacctgc
aacaagggcccagagtctggtagcctaacttgtgactgcctggctggacacacaggtctc
cgctgcgatgcctgctccgctggtttctacggcgacctgaccgcgccgggtggcggctgc
gaagagtgtctctgtaacaacaacatcgaccctgctgacagtgacgcgtgtgacagtgtg
acgggcgagtgtttgcgttgcctccacaacacccagggaccccgctgtcagagctgtaag
cctggctactatggagacgcactggcccaggactgcaaagagtgctcctgtgaccggcag
ggaacggatgtgacccagtgccctctgggcagcccgtgtttctgtgacccgctgacgggt
cagtgcccgtgtcgggcgggcgcggtgggcacgctgtgtgacgagtgtgccaccggcttc
tggaacattcagggagagtccgggtgccaaccgtgcaaatgtgaccctgctaactccttc
aataaccactgtgacaaggtgactggtcattgccagtgtcgtactgagtttggaggaaga
cagtgtgatgagtgtggggaaaatcactttgggaaccctgacctgcagtgtgtttcctgc
gattgtaacatggagggtaccgaccgccccgcctgcaacccattgacgggtgagtgtctg
tgccgcattggtgtgatgggcatcttctgtgatgagtgtgcccctgggtatgaccaagtc
ttccccgcctgcctcccgtgccacccctgtgccgtcctgtgggcggacaacgtcaccgac
gtccaacgtgccgcccagaggatgcgcaccttcatccctccccacggcgaacagctggag
cctggacacagtcgtcagttgcaacgaatgctagagatgcactccaagctggactatctg
gggaacctgacagggagatcgctacctcgggtgaaagacgtggagaagctatgtgtcata
atctcgaagctcaaagactccatagaccccaacgccatcatcgtggactcatcatctctt
ctgaacactgagatcgacaacatccaccacgagttcaagatgctgttggataacttaagg
aacaaaatcggcgaggctccaactctagatctaaaagaaatgcaggaggccctggagaag
atccggaagcagcatgcagacttcatggctgatgagaagaaggtgaaggaggccgagagg
gccctggagaactccatggacacacggcaggaaatcaaagaccatctgtccagctgcagc
atcttgggagacatggaggggctggagaagaaggtcaaggctctgagtgtggccaaactc
aacaaaaacatctgtggaggcccaggcgatgaggaatgctccaaatcagagtgtgggggt
gcgctgtgtcgagacttcctgggacagagagaatgtgggggtcctacgtgcaagggcagc
ttccctgtgagccacaatgccacaaaaacagctgagcaagtagagaatgaccttatcgac
ctgctccaaaaactaaaggactccaagatcaagatcaatgaggccaaacagatgacccaa
ggcactcatgagcaggcaaaggagctacagaagaagatcactgacagcaaggagaagttt
aagaaggagaagaatgacaccaaggacctcatcaatagggtcaaagactacctcacagat
gagatggtggcgccagaggacatagagaatttggtcaaggttgttctggccatccagctg
ccgggctctccggacgacatccgctccatgatccagaacatccggggtgtgctgaccaac
ttcattgatttcaaggaggatctgaaaaaactgaaggaccaagccaagacagcccaggac
ctgctggagaaagctcaggctatcagggacagaaccaggggtattgatgttacggatatc
aagaaaaccatgacggacactgagaatacacaggacaaggtcgagcaagacctggagaag
gctaaggaaagcaatggcgtggcggacaagatgattaaagagattgagaagaaactgaac
aacatagagactaacttgaactctactagaactccagagatgctggaggagattgaggtt
ctgaagagcaagaccgagatgaacagagagcaggtggagcaggccaaagctgatgcagat
gcagccataggtgccactactgacgcagagaaggggcttgacaaggtgactgcgctgttt
gataggctaaagacgggaaacacaaaccagaccaataatgaagtggccaacgaacgcctg
aagaacattactgtggaggcagagaaagttgcaaaagacgtccaagaaaaatttcaacaa
attgacgacttggagaaaaagatccaagacttcatcagaaacaaagaggacaaggccaag
gaggttgccatgttgctggagatggtagaagccctccaaaaggagattgctgcgcgtgtg
gatggttacattaactgtacctcctaa
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integrated database retrieval system