Oncorhynchus keta (chum salmon): 118401023
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Entry
118401023 CDS
T09424
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like protein 1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118401023
Transcription factors [BR:
oke03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
118401023
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
bHLH_INO2
PAS_2
bHLH_NCOA
bHLH_NPAS4
AARP2CN
PLU-1
Motif
Other DBs
NCBI-GeneID:
118401023
NCBI-ProteinID:
XP_035654052
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Position
22:10229698..10250753
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AA seq
612 aa
AA seq
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MNICDCLMADQRMDITSTMNEFMSPSSSDLISSSVNTPGMDYTRKRKCSTSDYQIDGFAL
EECGDHQGRIKNAREAHSQIEKRRRDKMNSFIDELAALVPTCNAMSHKLDKLTVLRMAVQ
HMKTLRGAANPYTEANYKPSFLTEDELKHLILRAADGFLFVVGCDRGKILFVSESVYKIL
NYCQNDLIGQSLFDYLHPKDIAKVKDQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLW
SGARRSFFCRMKCNRPYVKTEDKDFPCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDDDN
EPDNEGCNLSCLVAIGRLHPHIVPQPSHEDIRVKPTDYVSRHAIDGKFVFVDQRATAILA
YLPQELLGTSFYEYFHQDDIGHLAECHRQVLQMREKINTNCYKFKIKDGSFITLRSRWFS
FMNPWTKEVEYIVSTNTVVSCSMLDGADSSYPQSAVSPTASMDGVLTSEGGGRRALQTVP
GIPGGTRAGAGKIGRMIAEEVMETQRTRGSTPSTCGSSPLNISTPPPDCSPGGKRIQNGT
PDLPSAGTLPGGPDTVGYPYSNQSIMSDNSHLSIDEPGSSNDEAAMAVIMSLLEADAGLG
GPVDFSDLPWPL
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaacatttgtgattgtctaatggcagaccaaagaatggacattacctctacaatgaat
gagttcatgtcccccagctctagcgacctgatcagcagctccgtcaacaccccaggcatg
gactacacccgcaagagaaagtgcagcacctccgactaccaaattgatggatttgcttta
gaggagtgtggtgatcaccagggccggataaaaaatgccagggaggcacacagtcagatt
gagaagcggcgcagggacaagatgaacagcttcatagacgagctggctgcactagtccct
acctgcaacgctatgtcccacaagctggacaaactcacggtcctacgcatggctgtccag
catatgaagacattaagaggagcagcaaacccttacacagaggcgaactacaagccgtct
ttcctgaccgaggatgaactgaagcacttaatattgagggctgctgacggctttctgttt
gttgttggatgtgatcgtgggaagatcctttttgtctcggagtcagtttacaagatcctc
aactattgccagaatgacctaattggtcagagtctgtttgattacctgcatcctaaagac
attgccaaagtcaaggatcaactgtcgtcatcggatacagcacctcgggagcggctcatt
gatgccaaaaccggtctaccagttaagacagatatcacccctgggccatctcgactgtgg
tccggggccagacgctcgttcttctgccgaatgaaatgtaaccggccctatgtcaaaaca
gaggacaaggacttcccctgctccaaaaagaaagccgaccgcaagagcttctgcacgatc
cacagtactggctacctgaagagctggccgcccaccaagatgggcctggacgatgacaac
gagcccgacaatgagggctgtaacctcagctgcctggtggccatcggccggctgcatccc
cacatcgtcccccagccctcccacgaagacatccgcgtcaaacccaccgactacgtctcc
cgccacgccatcgatgggaagtttgtctttgttgaccagagggccacagccattcttgca
tacttaccccaggagcttcttggcacctctttctacgagtatttccatcaggatgatatt
ggccacctggcagaatgtcacagacaagtgctgcagatgagagaaaagatcaacacaaac
tgttataaattcaagattaaagatggctccttcatcactctgcgaagtcgctggttcagt
ttcatgaatccttggaccaaagaggtggagtacatcgtctccacaaacacagtggtctcg
tgcagtatgctggatggtgcagactccagctatcctcagtctgccgtctctcccactgcc
tctatggatggtgtgctgacgtcagaaggtggagggagacgggcccttcagacagtgcca
ggcatccccgggggaacacgtgcaggtgccggtaagatcggtcgcatgatcgcagaggag
gtgatggagactcagaggaccagaggctcaaccccctccacctgtggctccagccccctg
aacatcagcacccctcctccagactgctctccagggggcaagagaattcaaaatggaaca
ccagaccttccgtcggcagggacgctaccaggaggacccgacaccgttggatacccatac
tccaaccagtctattatgagtgacaactcgcacctcagcattgacgaaccaggctccagt
aatgacgaggcagccatggctgtgatcatgagtctcctggaggctgatgcaggcctcggt
ggccctgtagacttcagtgacttaccctggcccttgtga
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