Oncorhynchus keta (chum salmon): 118401134
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Entry
118401134 CDS
T09424
Name
(RefSeq) leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118401134
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118401134
Cell adhesion molecules [BR:
oke04515
]
Immunoglobulin superfamily
NGL family
118401134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
Ig_2
LRR_9
LRRNT
Mid2
DUF7617
Sp38
Ig_6
DUF4293
DUF6821
Syndecan
Motif
Other DBs
NCBI-GeneID:
118401134
NCBI-ProteinID:
XP_035654297
LinkDB
All DBs
Position
22:complement(17209861..17345395)
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AA seq
646 aa
AA seq
DB search
MLNKMTSSRQQQTMRGPRWNRALSDPLFVLLLALQLLAVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLREVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLGNLRYLNLGMCNLKEIPNLIPLVKLDELEMSGNQLTVIRPGSF
KGLIHLQKLWMMHAQIKTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPASHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGMAAELKCRASSLTSVSWITPNGSIMTHGAYKIRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENVLSYFTTVTVETIEPVHDEGRSTVWQKLGPTP
SAGSWETVSSTSTTTTTTARTPLSTRATEKTFTIPVTDLNDSSMTGLDEVMKTTKIIIGC
FVAITLMAAVMLIIFYKMRKQHHQQNHHAPQRTIEIINVDEDCVTGGPAMEGHLNLPPLE
HEHLNHYNTYKSAYNHVSTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgacctcttctcggcagcagcagacgatgagaggtcctaggtggaac
cgggccctgtccgaccctttatttgtgctgcttctagccctccagctcctggcggtggca
ggcctggtgcgcgctcagacctgcccctctgtctgctcctgcagcaaccagttcagcaag
gtgatctgcacgcggcgggggctccgtgaggtccccgatggcatatccaccaacacacgc
tacctgaacctgcaggagaacctcatccaggtgatcaaggtggacagcttcaagcacctg
cggcacctggagatcctgcagctgagcaagaaccacatccgaaacattgagatcggggcc
ttcaacggcctggctagtctcaacactctggagctgtttgacaaccgcctcaccacaatc
cccaatggggcctttgagtacctctccaagctcaaggagctgtggctgaggaacaacccc
atcgagagcattccctcgtatgcgttcaacagggtgccctcgctacggcggctggattta
ggggaactcaaacgcctctcgtatatctcagagggggctttcgagggcctcggcaacctg
cgctacctgaacctgggcatgtgcaatctgaaggagatccccaacctcatcccactggtc
aagctggacgagctagagatgtcagggaaccagctgacggtcatcagacctggctccttc
aaagggttgatccatctgcagaagctgtggatgatgcatgcccaaatcaaaaccattgaa
aggaactcctttgacgacctgcagtcgctggtggagctcaacctggcccacaacaacctc
accctgctgccccatgatctcttcacccccctgcaccacctggagagagtccacctccat
cacaacccctggaactgcaactgtgacatcctgtggctcagctggtggctcaaagagatg
gtgccggccaacaccagctgctgtgcccgctgcagttccccagccagccacaagggacgc
tacataggtgagctggaccagaactatttccactgttatgcacctgttattgtggagcca
ccagcggacctgaacgtgacagagggtatggcggcagagctgaagtgcagggccagctct
ctgacctcagtcagttggattacgcccaatggctccatcatgacccacggtgcatacaag
atccgcatttctgtgctcaacgacggcacgctcaacttcaccaatgtcaccatgcaagac
acgggaacctacacctgcatggtaagcaactcagcaggcaataccacagcatctgccact
ctcaacgtttcttccacagagaacgtcctcagctactttaccacagtaacagtggagacc
atcgagccagtgcacgacgaggggcgctccaccgtgtggcagaagttgggccccaccccc
tccgccggatcctgggagactgtgtcgtccacctccaccaccaccaccacaacggcccgg
acgcccctctccacccgggccacagagaagacctttaccatccctgtcacggacctgaac
gacagctccatgaccggcctggatgaggtgatgaagaccaccaaaatcatcatcggctgc
ttcgtggccatcaccctcatggctgccgttatgcttatcatcttctacaagatgaggaag
cagcaccaccagcagaaccaccatgcgccacagcgcaccattgagatcatcaatgtagac
gaggactgtgtgacaggcgggccggccatggagggccacctgaatctgcccccgctggag
catgagcacctgaaccactacaacacctataagtctgcgtacaaccacgtctccactatc
aactccatacacagctcggcgcacgaacctttgttaatccgggccagttcgaaagacaat
gtacaagagactcagatctaa
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