KEGG   Oncorhynchus keta (chum salmon): 118401191
Entry
118401191         CDS       T09424                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL2-like isoform X1
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    118401191
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:oke01009]
    118401191
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oke03021]
    118401191
Protein phosphatases and associated proteins [BR:oke01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     118401191
Transcription machinery [BR:oke03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     118401191
    Little elongation complex (LEC)
     118401191
SSDB
Motif
Pfam: ELL Occludin_ELL
Other DBs
NCBI-GeneID: 118401191
NCBI-ProteinID: XP_035654385
LinkDB
Position
22:complement(23596919..23651398)
AA seq 620 aa
MAALRQEHRYGLSCAKINKKAQNKTLFHVKLTDTAIRTLEAYQNLKTETRCPDLTHDVAH
RFTGSLPNQPAVCFKGSQGYIKIPAPSPEAPDALRVFSFYLSSDSKDKPQASVDCIHQHV
SGEGREHLEGQGSIQDKITVCATDDSYQMTRERMSQVEKDIMSRSAIEIKPGSTHGKCVK
IQRKQGLSSGMDSSSNKHSPNNKKSGAPNPVALRPLRDRIIHVLALKPYRKPELLLWLER
ERATPKDKTDLGAVLDEVAKLNHKDHSFTLKDEFYRHVQKDWPGYLEEEKPLIHRLLARK
LQPLSSSSQLKSFQSNHSFHKTPADSPSQLSPVKTPSVKRPVPSDLSDYQTPKKQRLLDH
SLSLQSPSNGQLGTFGARSSSGPGNTSVQTKTEFERTNNHVQGSPNGLYTRQKLGCSSSI
PKLERTEPGLAVPSPKAPQTEPSICTDQQLANGQHKKKKSKKHKDKDRERLKQDWIENSP
DLKQNQENITDNEGAKTPVTRTSPEELPDFLIKYNTITASEQRQQYKQDFCAEYDEYRAL
HDQIGTITEMFVQLGSKINTLSPGTQEYKLMEEQILQKYRKYKKKFPGYREEKKRCEYLH
QKLSHIKGLILDYDRTQAPS
NT seq 1863 nt   +upstreamnt  +downstreamnt
atggcagcgctgagacaggagcatcggtatgggctctcctgtgcaaaaatcaacaagaaa
gctcaaaataaaacgctatttcacgtcaagctaaccgataccgccattcgaacgcttgaa
gcctatcagaatctgaagactgaaacacgatgcccggaccttacccatgatgttgcacat
cgatttactggatccttaccaaatcagccagcagtttgcttcaaggggagccaggggtat
atcaagatccctgccccatccccagaggccccagatgcactccgggtcttctccttctac
ctgtccagtgatagcaaagacaaacctcaggccagcgttgactgcatccaccagcatgtc
tcaggggagggcagggagcacctggagggccagggcagtattcaggacaagatcactgtg
tgtgccactgatgactcataccagatgacccgagagcgcatgtctcaggttgagaaggac
atcatgagcaggtcggccatcgagatcaaaccaggctctacacatggtaaatgtgtgaag
atccagaggaagcagggcctgtcgtcaggcatggacagcagcagcaacaagcactcccct
aacaacaagaagagcggggcccccaacccagtagccctcaggcccctgagagaccgcatc
atccacgtcctggccttaaagccctacaggaagcctgagctgctgttgtggctggagagg
gagagggccactcccaaggacaagactgacctgggagcagtactggatgaggttgctaaa
ctgaaccacaaagaccacagctttactctgaaggatgagttctacaggcacgtccaaaag
gattggcccggttacctggaggaagagaagccgctcatccataggctcctggccaggaaa
ctgcagccactgagcagcagtagccagttgaagagtttccagtcaaaccattcattccac
aaaacccctgcggattctccgtcacaactcagcccggtcaagactccctctgtgaaacgc
cccgtgccctccgacctatctgattatcagacccccaagaagcaaagactattagaccat
agtttatctctgcagtctccttccaatggacagcttggtacctttggagcccgtagctca
tctggtccaggcaacaccagtgtacagaccaaaacagagtttgagagaaccaacaatcac
gtccagggaagccctaatggtctctacacaaggcaaaaattgggttgctcctccagtatt
cccaagctggagaggacagagccaggcctagcagtaccaagccccaaggctccacagact
gagccctccatctgcactgatcagcagctagccaatggccagcacaaaaagaagaagtcc
aagaagcacaaagacaaggacagggagcgcttaaaacaggactggatagagaacagtccc
gacctgaaacagaaccaggaaaacatcactgacaatgagggggctaaaacacctgtcact
cgtacatcaccggaggagctgcctgactttttaataaagtacaacaccatcacagcctca
gaacagcgacaacagtacaagcaggatttctgtgcagagtacgatgagtatagggccctg
cacgaccagatcggtaccatcactgagatgtttgttcagctgggttccaagataaacact
ctgtcccccggtacacaggaatacaagctcatggaggagcaaatactgcagaaatacaga
aagtataagaaaaagttccctggttaccgggaagagaagaagcgatgcgagtatctgcat
cagaaactttctcacatcaaaggtctgatcctggactatgaccgtacccaggccccttca
tag

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