Oncorhynchus keta (chum salmon): 118401229
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Entry
118401229 CDS
T09424
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2-like isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118401229
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118401229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
118401229
NCBI-ProteinID:
XP_035654465
LinkDB
All DBs
Position
22:25560134..25595964
Genome browser
AA seq
1819 aa
AA seq
DB search
MMKNKNKKQEDEGSTQSNASSNSASEESNHSGLESGSQSESEQGRERRRLHHSGESNSSS
ESGSQSGSESESQPASAEVKDRQPVKKKDNLSDVKKMWEEHPDVYGVRRSNRSRQEPARL
NIGAGGSSDSEGESPKRKAPRQKKKENTWKSDESDDDDDDDDEEDASSADSEQEEKKVRS
RRLPARRPKNKSSTVKKQQPPKGRKTRKQESSVEEDDDDDDDDDDDDDDTPKRQTRRTVS
AKVSYKEDQNDFETDSDDLIEMEGAEVEPEDDSETIEKIMDTRTGKKGACGASTTQYAVE
ENGDPGADFDPEKDEGEIHYLIKWKGWSYIHNTWESIDSLTQQKVKGLKKLDNFKKKNDE
LSAWLSKASPEDSEYYNCQQELTTDLNKQFHILERVIATKTGKTQGLSDFPSHSHKNGAS
SNEPEYLCKWMGLPYSECSWEDGALLGKKFQHCIDSFTNRNSSKTVPSKDCKVLKQRPRF
VALKNQPSYIGDENLQLRDYQLDGLNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYMF
HQHQLYGPSLVVVPLSTLTSWQREFDTWAPDMNVVVYLGDVMSRKSIRDYEWVCHQTKRI
KFNALITTYEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLIEFRSNHRLLITGT
PLQNSLKELWSLLHFLMPDKFENWEDFESEHGKGTDNGYQSLHKVLEPFLLRRVKKDVEK
SLPAKVEQILRVDMSAVQKQYYKWILTRNFRALQKGTRGSSSGFLNIVMELKKCTNHGFL
IKQPEEECDTPQEHLQALVRGSGKLVLLDKLLTRLRDRGNRVLIFSQMVRMLDILAEYLA
LKRYPFQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSD
WNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDIIERAKKKMVLDHLVIQRMDTTGR
TVLDNNSGNSNSNPFNKDELTAILKFGAEDLFKEAEGEETEPTEMDIDEILRLAETRESD
QGSSATDELLSQFKVANFSNMEESAPEMVERMVPDWDDIIPEDQRRRLEEEQKQKEMEDI
YMLPRSRSSNKRAQANDSDSDVGSKLKHRSSGSESETDDSGDDKKPKRRGRPRARKNNVE
GFTDAEIRRFIKAYKKFGAPLERLEGIARDSELVDKSQADLKRLGELIHSSCVTAVQEHE
EHLRENPSEAKGPGKRRGINIKISGVQVNAKSIIQHEEEFEPLHKAVPANPTERNQFQLT
CRVKVPHFDVDWDLQDDTQLLLGVYEHGYGNWDLMKTDPDLKLADKILPDDPEKKPQGKQ
LQARSDYLLKMLKKEVDCKDVTKEEAKVKKRKPRLKKENKAPKDEQGNDISSPRMSDNPS
EEGEVRDDGTEKTPTKKRQKKKDNKENKEKHGTPKKEKDADKDKKRPKPKKEKAKGAKGK
KPQGPVHITAGSDPVPIGEEDDELDQENFSICKERMRPVKKALKQLDKPDEGLSVQEQLQ
HTRTCLLKIGDRITECLKAYSDPEHVKTWRRNLWIFVSKFTEFGARKLHKLYKMAQKKRS
REEEKEHRKKGDDPSGRKKTFRAEASGSSRDSTGTQPSSKSHPGMPHPSPTSPHGPHREG
YNQSNKRHFGNDDRGDWQRDRKYNYPGNSNQPWQSERHHPYDAHRYKDHHYGDRRPREDS
YRSSSSSYRSGGSSSSPRKRPYDQYDSDREHRDRRAYYDRHPDSKRRRGDDFRPPQDFRG
SGGHPQDFRLRMPEHRGPPGPTGPEHFTRPYPDNKPPPLLDPRSPQAQKSPQDSRSPTAE
RTAEQKAASADLNWNNRKT
NT seq
5460 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaataagaataaaaagcaagaagatgaaggttcgactcaaagcaatgcatca
agcaattcggcctcagaagaatcgaaccactctgggttggagtctgggagtcagtcggag
agtgaacagggcagggagaggagaagattgcaccactcaggagagtccaacagctcttct
gaatctgggagccagtccgggtctgagagtgaatcccagccggcctcggcagaggtcaag
gacagacaaccagttaaaaagaaagacaatctgtcagatgtgaagaagatgtgggaagag
catccagatgtctatggggtcaggcgatcaaatcgcagtagacaagaacctgctcgtctc
aatattggagctgggggtagcagtgactccgaaggtgaaagtcctaaaagaaaagcacca
cgacagaagaagaaagaaaatacctggaaaagtgatgaatcggatgatgatgatgatgat
gatgatgaggaggatgccagcagtgcagacagtgagcaggaagagaaaaaagttagatcc
agacgacttcctgctagaagaccaaagaacaaatcatctacagtcaaaaaacagcagcct
ccaaagggaaggaaaaccaggaaacaagagtcatctgtggaggaagatgatgacgacgac
gacgatgatgatgatgatgatgatgataccccaaagagacaaacccggcgaacggtgtct
gctaaagtcagttacaaggaggaccaaaatgactttgagaccgactctgacgacctgata
gagatggagggagctgaggtggagccggaagatgacagcgagaccattgagaagatcatg
gataccaggacaggcaaaaaaggagcctgcggggcttccactacgcagtatgctgtggag
gaaaatggggacccaggagctgactttgacccagagaaggatgagggagagatccattac
ctgatcaagtggaaaggctggtcctacatccacaacacctgggagagcattgactccctc
actcaacagaaggtcaagggactcaagaaactagataacttcaagaagaagaacgatgag
ctcagtgcttggttgagcaaagcatcacctgaggattcagaatattacaactgccagcaa
gagctaaccactgatttaaataagcagttccatattctggagagagtcattgcgactaaa
actgggaagacacagggtctctcggattttccttctcacagccacaagaatggtgcttct
tccaatgagccagagtacctgtgtaagtggatgggcctgccttattcagagtgcagctgg
gaggatggagctctgctggggaagaagttccagcactgtatagacagcttcaccaacagg
aactccagtaaaacagtcccctccaaagactgcaaagtgttgaaacagaggcccagattt
gttgcactaaagaaccagccatcgtacattggggatgagaacctgcagctgagagattac
cagttagatggactgaactggctggctcactcctggtgcaggtgcaatagtgtgatcctg
gctgatgagatgggtctggggaaaaccatccagaccatctcgttcttgtcctacatgttc
caccagcaccagctgtatgggccctccctggtggtggtacccctatccaccctcacctcc
tggcagagagagtttgacacctgggcccccgatatgaacgtggtggtctacttgggagac
gtgatgagcaggaaatcgatccgtgactatgagtgggtatgccatcagacgaagagaata
aagttcaatgcacttataaccacgtatgaaattctactgaaagacaagggggtgttgggg
aacataaactgggctttcttgggtgtggacgaagctcacaggctaaagaatgacgactcc
cttttgtacaaaaccctgattgagttccggtccaaccacagacttcttatcacagggaca
ccactgcagaactctctcaaagagctgtggtcccttctgcacttcctcatgcctgacaag
tttgaaaattgggaagattttgaaagtgagcatggtaaagggactgacaatggctaccag
agccttcacaaagtccttgagcccttcctcctgaggcgtgtaaagaaggatgtggagaaa
tccctgcctgccaaggtagaacagattctccgtgtggacatgtctgctgtgcagaagcag
tactacaagtggattctgaccaggaacttcagagccctgcagaaaggcacccgaggcagc
tcctctggcttcctcaacatcgtcatggagctgaagaagtgcactaaccatggtttcctc
atcaaacagcctgaggaagagtgtgacactccacaggagcacctgcaggcgttggtgagg
ggcagtgggaagctggttcttctggacaagctactgaccagacttcgggacaggggcaac
agagtcctcatcttctcccagatggtgcgcatgttggacatactggctgagtacctggcc
ctgaagcgctacccattccagcgcctggatggctccataaagggagaaatacgaaaacaa
gcacttgaccactttaatgctgaaggttctgaggacttctgtttcctgctgtccacaaga
gctggaggtttgggtatcaaccttgcctctgcagacactgtggtcatctttgactctgac
tggaaccctcagaacgacctgcaggctcaggccagggctcacaggattggccagaagaag
caggtgaatatctatcgcttggttacaaagggatctgtggaggaggacattattgagaga
gccaagaagaagatggttttggaccatcttgtaattcagagaatggacaccactggtcga
actgtattggataacaactccggaaattcaaactccaacccattcaataaagatgagctg
actgccattctgaagtttggagctgaagatctgttcaaagaggcagaaggagaggagact
gaacctacggagatggatattgatgagatcttgcggttggctgaaaccagagaaagtgac
cagggatcaagtgccacagatgagcttctctctcagttcaaggtggccaacttctccaac
atggaggagagtgctccagagatggtggagcggatggtgcctgactgggacgacatcatc
ccggaggaccagcggcggaggctggaggaggagcagaagcagaaggagatggaggacatc
tacatgctgcctagaagcaggagctccaataagagggcccaagccaacgacagtgacagt
gacgttggctccaagctgaagcaccgctcctcgggctccgagagcgagacggacgatagc
ggcgatgacaagaagccaaagaggagaggcaggcccagagcccgcaagaacaacgtggag
ggttttactgatgcagagatccgcaggttcatcaaggcttataagaaatttggagctccg
cttgaaaggctggagggcattgcccgggactcagagctggtggacaaatcccaggcagac
ctgaagagactgggcgagctgatccatagcagctgtgtgacggctgtccaagagcatgaa
gagcacctcagagagaatcccagtgaagccaaaggccctgggaagcgcagaggtattaac
atcaagatctcaggagtgcaggtcaatgccaagtccatcattcagcacgaggaggagttt
gagccactgcacaaagctgtgccagctaatcctactgagagaaaccaattccaactgacc
tgcagagtgaaggtgcctcactttgacgtggactgggatctgcaagatgacactcaactg
ttgctgggggtctatgagcatggctatggaaactgggatctgatgaagaccgaccccgat
ctcaaactcgcagacaagattctcccagatgacccagagaagaaacctcaagggaagcag
ttgcaggccagatcagactatcttctgaagatgctgaagaaagaagtggactgtaaagat
gttactaaggaggaggccaaagtgaagaagaggaagcctcggttgaagaaagagaacaag
gcccctaaagatgaacagggcaatgacatctcctccccccgcatgtcagacaacccctca
gaggaaggggaggtgagggatgacgggactgaaaaaactcccacaaagaagaggcagaag
aaaaaggataacaaagagaacaaagaaaaacacggaactcctaaaaaagagaaggacgcg
gacaaagacaaaaaacgtccgaagccaaaaaaagaaaaggcaaaaggagctaaagggaag
aagccccaggggccggtccacattactgctgggagtgaccctgttcccatcggagaggag
gacgatgagctggaccaagagaacttcagcatatgtaaggagcgcatgaggccggtgaag
aaggccttaaaacagctggataagcctgacgagggcctgtctgttcaggagcagctccaa
cacacacgcacctgcctgctgaagataggagaccgcatcactgagtgtcttaaagcctac
agcgacccagagcatgtcaaaacatggcgtcggaacctctggatttttgtgtctaagttc
acagaatttggagcgaggaagcttcacaagctgtacaagatggctcagaagaagcggtct
cgggaggaggagaaggagcatagaaaaaagggggatgacccgtcaggcaggaaaaagact
ttccgagcagaggcgtctggttccagtcgagactccaccggcacccaaccatcgtccaag
tctcatccaggcatgccccacccctctccaacatccccccatggtccccacagagaaggc
tacaaccagtccaacaagcgacactttggaaatgatgatcgaggagattggcagcgagat
cgtaaatacaactaccctggaaatagcaaccagccctggcaaagcgagcggcatcatcca
tatgacgcccatcggtataaggaccatcactatggtgaccgtcgtccgcgtgaagactcc
taccgcagcagctctagtagttaccgtagtggcggcagcagcagctcccctcggaagagg
ccgtatgaccagtatgacagcgaccgagaacacagggaccgtcgtgcctattacgacaga
catccagactcaaagcggagacgcggcgatgacttccgtcctccccaagacttcaggggg
agtggaggccatccccaagacttcaggctgaggatgccagagcatagggggcccccgggg
ccaacagggccagaacacttcacccggccctatccagacaacaaaccaccccccctgctg
gacccacgctccccacaggcgcagaagtccccccaggactctcgctcgccaactgcagag
cggactgcagagcagaaagcagcttcggctgatttaaactggaacaacaggaagacatga
DBGET
integrated database retrieval system
