Oncorhynchus keta (chum salmon): 118401283
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Entry
118401283 CDS
T09424
Name
(RefSeq) nuclear pore complex protein Nup93-like
KO
K14309
nuclear pore complex protein Nup93
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118401283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118401283
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118401283
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
RESC9_N
Motif
Other DBs
NCBI-GeneID:
118401283
NCBI-ProteinID:
XP_035654559
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Position
22:28390191..28436823
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AA seq
820 aa
AA seq
DB search
MEAEGFGELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTSQDAADVKA
SILLGSRGLDIFHISQRLESLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRRR
TFLLAEEYHRESMLVQWEQVKQRVLHTLLGAGEDALDFSQDVEPSFVSDAGTPGRSALDS
VEVAYGRQIYVFNEKIVNGHVQPNLGDLCASVVDSLDDKNVSDMWLMVKQMTDVLLVPAK
DTLKSRTSVDMQMAFVTQALQFLENSYKNYTMVTVFGNLLQAQLGGVPGTYQLVCSFLNI
KLPGPLPGMQDGEVEGHPVWALIYYCLRCGDLGAAMQVVNRAQHQLGDFKTWFQEYMNSP
DRRLAPATENKLRLHYRRVLRNSADPYKRAVYCLIGKCDIADNHGEVADKTEDYLWLKLN
QVCFDDDGSSAPQDRLTLAQLQKQLLEDYGESHFSAIQQPFLYFQVLFLTAQFEAAVAFL
FRVERLRSHAVHVALVLYELGLLLKSSGQSAQLLSQEAGDPPMVRRLNFIRLLMLYTRKF
ESTDPREALQYFYFLRNEKNSQGENMFMCCVSELVIESREFDMLLGRLEKDGSRKPGVID
KFAGDTRAIITKVALEAENKGLFEEAVKLYELTKNPDRVLELMNKLLSPVIAQVGSTQSN
KERLKNTAVAIAERYRTQGVAGEKSVDSTFYLLLDLMTFFDEYHVGHIDQAYDVMERLKL
VPLSQDSVEERVAAFRNFSDEVRHNLSEVLLATMNILFMQYKRLKGATAGAPGRPQRSME
DRDSQLRSQARALITFAGIIPYRMAGDTNARLVQMEVLMN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggagggctttggagagctcctgcagcaggcggagcagcttgcagcggaaaca
gaggctgtgtctgagcttccccatgttgagaggaaccttcaggagatccagcaggctgga
gagaggctacgttcccgcaccttaacccgaacgtcgcaagacgctgctgacgtaaaagcc
tctatcctcctaggttccagaggcctggacatattccacatctcccagcgtctggagagc
ttgagtgctgccaccacctttgaacctctggagccagtgaaagacactgacatccagggc
tttctgaagaatgagagggacaatgcgctgctctctgcaatcgaggagtcacgtcgcagg
acgttcctcctggcagaggagtaccaccgtgagtccatgctggttcagtgggagcaggtg
aagcagagagtactgcacaccttgctgggagcaggggaagatgctctggacttcagccaa
gatgtagagcccagctttgtgagtgacgcagggactcctgggcggagtgctcttgacagc
gtggaggtagcctatggacgacagatctacgtcttcaatgagaagatagtgaacggacac
gtccagcccaacctgggagacctctgtgcctcagtggtagacagcctggatgacaagaac
gtgtcagatatgtggctgatggtgaagcagatgacagacgtgctgctggtcccagccaaa
gacacgctgaagagccgcacgtccgtggacatgcagatggcttttgtcacgcaggccctg
cagttcctggagaacagctacaagaactacaccatggtaacggtgtttgggaacctgctc
caggcccagctgggcggagtccctggcacctatcagctggtgtgcagcttcctcaacatc
aagctaccagggcctctgccaggcatgcaggatggtgaggtggagggtcacccagtctgg
gctctgatctactactgccttcgctgtggggacctgggcgctgccatgcaggtggtgaac
cgggctcagcaccagctgggagacttcaagacctggttccaggaatatatgaacagccct
gacagacgcttggcccctgccacagagaacaagctgcgtctccactaccgcagagtgctg
aggaacagcgctgacccctacaagagggccgtctactgcctcattgggaaatgtgacatt
gcagacaaccatggagaggtggccgacaaaaccgaggactacctgtggctcaagctcaac
caggtgtgcttcgatgacgacggtagcagtgctcctcaggacagactgacactggcccag
ctacagaaacagcttctagaggactatggagagtcccacttctcagccatccagcagccg
ttcctgtacttccaggtgctgttcctcacggcccagtttgaggctgctgtggccttcctg
ttccgggtggagcgtctacgcagtcatgctgttcacgtggctctggttctctacgaacta
gggctgctgctcaagtcatctggacagagcgcacaactgttgagtcaggaggctggggac
cctcctatggtccgacggctcaacttcatccgtctcctcatgctctacacacgcaagttt
gagtccacagacccccgggaagctctacagtacttctacttcctacggaatgaaaaaaac
agccaaggagaaaacatgtttatgtgctgtgttagcgagctggtgattgagagtcgagag
tttgacatgcttctgggaagactggaaaaagatggcagcaggaagcctggagtgattgat
aaatttgccggagacacgcgagccattatcacaaaagtggcgctggaggcagagaacaag
ggcctgtttgaggaagcagtcaaactgtatgagctgaccaagaatccagacagggtccta
gagctgatgaacaagctgctgagtcctgttattgcccaagtgggctccacccagtccaat
aaggagagactgaagaacaccgctgttgccatcgctgagcggtaccggacccagggtgtt
gctggagagaagtctgtggacagcaccttctacctgctgctggacctcatgaccttcttt
gatgagtaccatgttggtcacatagaccaagcctacgatgttatggagagactgaagctg
gtccctctgagtcaggacagtgtggaggagagggtcgctgcattccgtaatttcagtgat
gaggtcaggcataatttgtcggaggttctcctggccaccatgaacatcctgttcatgcag
tacaaacgtctgaagggcgccacagcaggagcccctggtcgaccacagagatccatggag
gacagagactcgcaactgcgcagccaggctcgagcactgatcacgtttgctgggattatc
ccataccgcatggcaggcgacaccaatgcccggctggtgcagatggaggtcctaatgaac
tga
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