Oncorhynchus keta (chum salmon): 118401297
Help
Entry
118401297 CDS
T09424
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1-like isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04115
p53 signaling pathway
oke04120
Ubiquitin mediated proteolysis
oke04137
Mitophagy - animal
oke04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118401297
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
118401297
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118401297
09143 Cell growth and death
04115 p53 signaling pathway
118401297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118401297
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118401297
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
118401297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
TerY_C
Motif
Other DBs
NCBI-GeneID:
118401297
NCBI-ProteinID:
XP_035654574
LinkDB
All DBs
Position
22:complement(28774658..28795608)
Genome browser
AA seq
334 aa
AA seq
DB search
MSGRANVQPVNSWKGVLKLFTCIATRTANNPKEVPTFQEKKKALFGNLMDEEMSRQTATA
LPTGTSKCAPSQRIPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPK
LTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAEHEELCEFRPYSC
PCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFH
FMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIA
TAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcagagctaatgtgcagcctgtgaactcatggaagggggtgctcaagctcttc
acatgcatagccactagaacagccaacaaccccaaagaggtccccacatttcaagagaag
aagaaagccttatttgggaatcttatggacgaagaaatgagtcgccagaccgccacagcg
ctgccaacaggaacctccaagtgcgccccctcccagcgcatccccaccctgtccggcact
acagcctctaacagcgacctggccagcctgtttgagtgccctgtctgcttcgactatgtg
ctgccccccatcctgcagtgccagagcggccacctggtctgcagcaactgccgtcccaag
ctcacctgctgccccacctgtcggggcccgctgggctctatccggaacctggccatggag
aaggtcgccaactctgtgctgttcccctgcaagtatgcgtcgtcgggctgcgaggtaacg
ctgccccacacagacaaggcggagcacgaggagctgtgtgagttccggccgtactcctgc
ccttgcccaggggcttcctgtaagtggcagggctcgttggacgcggtaatgccccacctc
atgcaccagcacaaatccatcaccacgctgcagggcgaggacatcgtgttcctggctaca
gacattaacctgcctggagcagtggactgggttatgatgcagtcctgcttcggtttccac
ttcatgctggtcctggagaagcaggagaagtacgacggtcaccagcagttctttgccatt
gtgcagctaatcggcacgcggaagcaggcagagaactttgcctaccgcctggagctcaac
gggcaccggcgacggctcacctgggaggccacgccccgttccatccacgagggcattgcc
acggccattatgaacagcgactgcctggtgtttgacacctccatcgcgcagctgttcgct
gagaacgggaacctgggcatcaatgtcaccatatccatgtgctga
DBGET
integrated database retrieval system
