Oncorhynchus keta (chum salmon): 118401382
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Entry
118401382 CDS
T09424
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118401382
04121 Ubiquitin system [BR:
oke04121
]
118401382
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118401382
Membrane trafficking [BR:
oke04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
118401382
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118401382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
Zn_ribbon_19
zf-RING_11
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-Nse
zf-RING_16
HypA
C1_2
zinc_ribbon_16
DZR_2
DZR
U-box_ZFPL1
Motif
Other DBs
NCBI-GeneID:
118401382
NCBI-ProteinID:
XP_035654735
LinkDB
All DBs
Position
22:complement(34394316..34402775)
Genome browser
AA seq
325 aa
AA seq
DB search
MAEAPPWPSRFFCHRCSEEISPRLPDYTCPRCESGFIEELLEDRRSENGSTSTISSGDQN
QHPFENVDPSNIFTFPSGYGQFAMGVFDDSFDFGAGLGGAGLGGAGLGGAGLGTEDNRDA
ENRREREMASRQRYGARQPRGRHGVRRQAGRPEGVPTLEGIIQQLVNGIIAPAAVPNIGV
GPWGVLHSNPMDYAWGANGLDAIITQLLNQFENTGPPPADGDKIMSLPTVLITQEHVGSG
LECPVCKEDYSAGENVRQLPCNHLFHNDCIVPWLEQHDTCPVCRKSLSGLNTAMNPPGLS
GMNFASSSAPPSSSSTSNENSANNS
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcacctccatggcccagccggtttttctgtcacagatgttcggaagagatc
agccctcgtctccccgattacacatgtcctcggtgtgaatctggctttatcgaggaactg
ctggaggaccgacgcagtgaaaatgggtccacatccaccatctccagcggtgaccagaac
caacatccatttgagaatgtggacccttcaaatatatttacgttcccctcgggttacggc
cagtttgctatgggtgtctttgacgactcctttgacttcggagcggggctgggaggagct
gggttgggaggagcagggctaggaggagctggattgggaacagaggacaaccgcgacgcc
gagaatcggcgagaacgggagatggcatcacggcagcgatacggcgccagacaacctcgc
ggtcgccatggcgtcagaaggcaggcagggagaccggagggagtgcccactttagaggga
atcattcagcagctagtgaatggaataatcgcgcctgcggcagtgccaaatattggtgtg
ggaccctggggcgtgcttcactcaaaccccatggattacgcctggggtgccaacggacta
gatgcaatcattacacagttattaaatcagtttgagaacactggccctccaccagctgat
ggggacaaaatcatgagccttcccacagtcctaatcacacaggagcatgtaggctctggt
ctagaatgtccagtgtgtaaagaagactacagtgctggagaaaacgttaggcaacttcca
tgtaatcatttgtttcacaatgattgcatagtaccctggcttgaacagcacgacacatgt
ccagtgtgcaggaaaagcttaagtggactgaacacagccatgaatcctccaggtctatca
gggatgaactttgcctcttcctctgcacccccgtcctccagctcaaccagcaatgagaac
tcggccaacaactcctaa
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