Oncorhynchus keta (chum salmon): 118401408
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Entry
118401408 CDS
T09424
Name
(RefSeq) UV excision repair protein RAD23 homolog B-like
KO
K10839
UV excision repair protein RAD23
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03420
Nucleotide excision repair
oke04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118401408
09124 Replication and repair
03420 Nucleotide excision repair
118401408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
oke03051
]
118401408
03400 DNA repair and recombination proteins [BR:
oke03400
]
118401408
Proteasome [BR:
oke03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
118401408
DNA repair and recombination proteins [BR:
oke03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
118401408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
UBA_3
Crinkler
Rad60-SLD_2
Ubiquitin_2
UBA_2
CUE
Motif
Other DBs
NCBI-GeneID:
118401408
NCBI-ProteinID:
XP_035654783
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All DBs
Position
22:complement(37228192..37233698)
Genome browser
AA seq
457 aa
AA seq
DB search
MLSITLKTLQQQTFKIEIDPELTVKALKEKIETEKGKDGYPATGQKLIYAGKILNDDIPL
KHYRIDENNFLVVMVTKPKPPASPQISPLAAPASTPAPAPAPPAVSGLSLSDIARPTSSP
APMEISTLSPTSTPAPASSLTQAVEFFTPPAPAPASIPPAALGTSAAPAAAASSHSEVKP
EGEHPEQPFATPPALSSSSLVDDLSLLEEAASILVTGQAYENLVSEIMSMGYEREQVIAA
LRASYNNPDRAVEYLLMGIPAEADLLPPEAFLHTALANLNPTAPAPATDRAQPPPAATTG
AVSSTQQPLSPGGLTGGLTGGTGGSTGDENPLEFLRNQPQFQQMRQVIQQNPALLPALLQ
QLGRDNPQLLQQITQHQERFVQMLNEPQGGEMVEEGVQSQGAPQTNYIQVTPQEKEAIER
LKALGFPEGLVIQAYFACEKNENLAANFLLQQTFDDE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgataacgttgaagactcttcagcagcaaacgtttaaaatagaaatagatcca
gaactaacggtaaaagccctgaaggagaagattgagactgaaaaagggaaggatggctat
ccagccacaggacaaaagttaatctacgcaggcaaaatcttgaatgatgacatacctcta
aaacactacagaattgatgagaacaactttctggtggtcatggttacaaagcccaaacct
ccagcttctccacagatttctcctctggcagccccagcctctacccctgctcctgcccct
gcacctcctgctgtttctgggctgtccctctctgacattgcccgacctacctcatcccct
gcccccatggagatctccaccctgtcccctacatctacacctgcccctgcctcaagcctc
acacaagcagtggagttcttcacaccccctgcaccagcccctgcttctattccccctgca
gccctggggacgagtgcagccccagctgcagcagcatcctcccactcagaggtcaagcct
gagggggagcaccctgaacagccctttgctacaccaccagccctctcctcctccagcctt
gttgatgacttaagtctcctggaagaagcagcgtcaatactggtgacaggacaggcatat
gagaatctagtgtctgaaatcatgtctatgggatatgaaagggagcaggttattgcagcg
ctgcgagccagttacaacaacccagacagagccgtggagtacctgctaatggggattcca
gccgaggctgaccttctgccaccggaggcgttcctacacacagctctggccaacctcaac
cccactgcccctgctccagccacagatagagcccagcccccaccagcagccacgacaggc
gcagtgtcttcaacccagcagcccctctcacctggtgggctgactggtgggcttactggt
ggtactggtggaagtactggggatgagaacccactggagtttttgaggaaccagccacag
ttccagcagatgagacaggtcatccagcagaacccagctctccttcctgccctgctccag
cagctaggcagagacaacccccagctgctgcagcaaattacccagcaccaggagcggttt
gtgcagatgctgaacgagccccaaggaggagagatggtagaggagggagttcagtcccag
ggggcgccacagactaactacatccaggtcaccccacaagagaaggaggccatcgagagg
ttaaaagccttgggatttccagagggacttgtcattcaagcatatttcgcatgtgagaag
aacgagaatttagctgctaatttcctgctccaacaaacatttgatgacgagtga
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integrated database retrieval system
