Oncorhynchus keta (chum salmon): 118401447
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Entry
118401447 CDS
T09424
Symbol
abca7
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke02010
ABC transporters
oke04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
118401447 (abca7)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118401447 (abca7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oke02000
]
118401447 (abca7)
Transporters [BR:
oke02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
118401447 (abca7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
118401447
NCBI-ProteinID:
XP_035654847
LinkDB
All DBs
Position
22:complement(38772435..38830191)
Genome browser
AA seq
2350 aa
AA seq
DB search
MGIGTQLLLLLWKNITYRRRNKVQLIIELVWPLFLFLILISVRHSHPPYKQSQCHFPNKA
LPSAGTLPWVQGIICNINNPCFHNPTQGETPGRVGNFDNSILSRLLVDSQTILSYSGNQT
AFSGFQDLLDTIRRLGERPGAWPNLPVGEYLRANQTFSNFLLTNGSLSPSALDQLFRARL
NFQVVSLAGTGVMLKDIVCNATVLSQFLTVDQEDSMAELQSQLCAIPADTLQQAEQLFLS
QLDFSKFFTRDRLRANAGDLRVISQAVTSVSKELAVLMDDLSSLASFRELNSELRLLSPE
NRSTLPRESFRAFSRIMCGHPEVGGERIPSLNWYEDNDIKSFLGKNGTEDNDMEKDNVTT
PYCKSLIQSLESNPLSRIVWRGIKPLFIGKLLYTPDTPAVRDVMKEVNKTFQDLQVLEEL
NGAWMEVAPGIKTYMESSVEIQLLQDLLRRPEVAVLVNLQLENTSWTAKRIARFLSTPKE
PRKEGAPLTWLDVYSDLNNTITTLAQVTQCFSLNKLEGAATEGQMIDRALELLEEREFWA
GIVFLLPNTSLPGLPPHVTYKIRMDIDDVARTNKIKDRFWDPGPAADPFSDMRYIWGGFV
YVQDLVERAVARVLSGVEQSTGLYIQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVAM
IIKGVVYEKEARLKETMRIMGLGTGQLWVSWFISSLVPFLVSAGLLIALLKWGDILPYSN
PAVVFFFLTAFATATIMQCFLISTFFSRANLAAACGGLIYFALYLPYVLCVAWRDHLTTT
HRVLASLFSPVAFGFGCEYFSQYEEQGVGIQWFNLNSSPMEGDTYNFTTSIIMLHIDACI
YALATWYIEAVFPGEYGVPRPWNFVFSLNYWGGIPLEAGMPIPPAPRGQGGDRIEADPSH
LVLGVAIRNLVKIYKQGAKLAVNHLNLKFYEGQITSFLGHNGAGKTTTMSILTGLFPPTA
GTVYIKGMDIRTDMDIIRKTLGVCPQHNVLFDILTVEEHVWFYGRLKGLSGDEVRKELDT
LLEDVGLLHKRHEQTRNLSGGMQRKLSVAIAFVGGSKVVVLDEPTAGVDPYSRRGIWDLL
LKYRKDRTIILSTHYMDEADLLGDRIAIISQGKLCCCGSPLFLKAKLGTGYYLTVVKKEG
LDTRTPSSASATKLPPATKDSDSSMSDDTGLGSDVSGSDLAALLTLAQRHIPGARLVEDV
GREAVINLPQKSAEDSSLAIFLTELDRRQADLGITSYGLSDTTLEEIFLRVAEETGVDVD
PEDSPAQADTPHGQGQGQGLSGEPSEDPGRKRLRKQEPQETDLLSGDGHGGVPLTGWGLT
WQQLRALFIKRWLYALRSRRGFFAQIVLPAVFVLIALLFSLIVPPFGKYPSLQLQPWMYG
EQYTFFSNDAPGDPAIQNLLDALLDRPGFGTKCMENSTDPQCLQEEEGIFMRPQILYSTW
QLFNRGNWTADKPSPDCECSSEEVRRMLPDCPEGAGGIPPPQVQRLTGDILQNMTGRNIS
DYLVKTYPQIMKKSLTSATKKWINEFRYGGFSLGGRGTQAVPQAYQMEDSVMSIRSRYKV
AQNSSLDQLLGRLPEFLGGLNSQNNVKVWYNNKGWHAMASFVNVMNNGLLRASLPPGPER
MKYGITAYNHPLNLTKEQLTEIAMMTTSVDVLVSICVIFSMSFVPASFVLFLIEERVSKA
KHLQFVSGVRPILYWLANFTWDMLNYTVPATMVVLIFICFQQQSYVSETNLPALVLLLLL
YGWSITPLMYPASFLFSVPSTAYVVLTSINLFIGINGSIATFVLELFVDQHLNDINKILK
KVFLIFPHFCLGRGLIDMAKNQAMLDAFQRLGAKQTLDPLEWDFVGKNLFAMAVEGVVFF
LFTILLQYKFFVNCRPCSELELPPLGPEDEDIARERERVKSGKAQADILTMMDLSKVYKA
GKKPAVDRLCLGIPRGECFGLLGVNGAGKTSTFRMLTGDTAITYGEAFLSHHSVLTEMER
VHQLMGYCPQFDAICDLLTGREHLEFYARLRGVPEESVAKVAQWGVKKLGLTQYAEREAG
GYSGGNKRKLSTAISLIGAPPVIFLDEPTTGMDPKAKRFLWNCILSVIKEGRAVVLTSHS
MEECEALCTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIVLRLSGSKPPEDPCTVDTYIKG
SFPGIELKERHQNVLQYQLPSHSCSLARVFDVLSNNHEELGIADYSVSQTTLDQVFVNFA
KEQSDDDLLREVTVNGGTPAPQPRRAAQPTQPGQTAKPAQTTKPPQSVNSSDGRPRETKP
NGVTDSGMAMTSRPQEKPQSSRGESRRELSSRRSSKESSANGSKGTRETSGSKDPTSLFL
VGSSTQDSSV
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atggggatcgggactcagctcttgctcctgctctggaagaacatcacttaccgcaggagg
aacaaggtccagttgattatcgagctggtctggcctctgttcctcttcctcatcctcatc
tcagtgcgtcactctcaccctccctacaaacagagccaatgtcatttccccaacaaggca
cttccctcagcaggcactctgccatgggttcaggggatcatctgcaacatcaacaacccc
tgtttccacaaccccactcagggggagaccccagggcgggtgggcaactttgacaactcc
atactctctcgactcttagtggactctcagacaatcctgtcctacagtggcaaccagaca
gccttctctggctttcaggaccttctagatactatacggagacttggagagaggccaggc
gcctggccaaatcttcctgtgggagaatacctgcgagccaatcagactttctccaacttt
ctcctgaccaatggcagcctgtctccctctgccctcgaccagctgttcagggctcgcctg
aactttcaggtggtgtctctggcaggcactggggtgatgctgaaggacattgtgtgcaat
gccactgtgctgagccagttcctcactgtagatcaagaggattctatggcagagctgcag
agccagctctgtgccatcccagccgacaccctgcagcaagcagagcagctcttcctctcc
cagctggacttcagcaagttcttcacgagagacagactgagggccaacgccggtgacctc
cgggtcatcagtcaagcggtcacctccgtgtccaaggagttggcagtactcatggatgac
ctgtcctctcttgctagctttagggagttgaactcggagctgcgtctgctctcgccagag
aaccgttcgaccctgccacgggagagcttcagggccttctccaggattatgtgtggccac
cctgaggtgggtggcgagaggatcccttcactcaactggtacgaggacaatgacatcaag
tcattcctgggcaagaacggcaccgaggacaacgacatggaaaaggacaacgtcaccacc
ccgtactgtaaaagcttgatccagagcctggagtccaacccactgtctcgcatcgtgtgg
agaggtatcaagcccctgttcattggcaaactgctgtacacaccggacacccctgccgta
cgcgacgtcatgaaagaggtgaacaagaccttccaggacctgcaggtcctagaggagctg
aatggtgcctggatggaggtagcacctggtatcaagacctacatggagagtagtgtggag
atacagctgctgcaggatctgctgaggcgaccggaggtggccgtgttggttaatctgcag
ctggagaacacttcctggacagccaagcgcattgcccgcttcctgtccacacccaaagaa
cccaggaaagaaggagcgccccttacctggctggacgtgtactccgacctgaacaacacc
atcaccactctggctcaagttacccagtgtttctccctgaacaagctggagggtgctgcc
acagagggacagatgattgacagggccttggagctgctggaggagagagagttctgggct
gggatagtgttcctccttcccaacacgtctttacccggtctgccccctcatgtcacctac
aaaatccgcatggacatcgacgatgttgcacgcaccaacaagatcaaggacaggttctgg
gacccaggcccagcagcggaccccttcagtgacatgcgctacatctgggggggctttgtg
tacgtacaggacctggtggagagagctgtggcccgtgtgctgagtggtgtggagcagtcc
actggcctctacatccagcagatgccctacccctgctacgtggatgacgtttttctacgc
gtgctgaaccgctcgctgcccctgttcatgacgctggcgtggatctactcggtggccatg
atcatcaagggcgtggtgtacgaaaaggaggcacggctcaaggagaccatgaggatcatg
gggcttggtacaggccagctgtgggtcagctggttcatcagcagcctggtgcccttcctg
gtcagcgccggcctcctcattgctctgctcaagtggggggacatcctgccctacagcaac
ccggctgtggtgttcttcttcctgacggccttcgctacggccaccatcatgcagtgtttc
ctcatcagcaccttcttctcccgggccaacctggcagccgcctgcggaggcctcatctac
ttcgccctctacctgccctatgtgctgtgtgtggcctggagagaccacctcaccaccaca
caccgtgtcctagcaagcctgttttctcctgtggcctttggctttggctgtgagtatttc
tcccagtatgaggaacaaggagtgggcatccagtggttcaaccttaactccagccccatg
gagggagacacctacaatttcaccacttccataatcatgttgcatatcgatgcatgtatc
tatgctctggccacctggtacattgaagctgttttcccaggtgaatatggggtccccagg
ccatggaactttgtgttcagtttgaactattggggaggaattcctctagaggccggcatg
cccatccctccggctcccagaggacagggaggagatcgcatcgaagccgacccctctcac
ctcgtactcggtgtggccatccgcaacctggtcaaaatctacaaacaaggtgccaagctg
gcggtcaaccacctcaatctcaagttctatgaagggcagatcacctctttccttgggcac
aacggtgctggcaaaacaaccaccatgtctatcctgacgggtctgtttccccccacggct
gggactgtgtacattaagggcatggacatccgcactgacatggacatcatcaggaagacc
ttgggagtgtgtcctcagcacaatgtcctttttgacattctgaccgtagaggagcatgtg
tggttctatggtcgtctgaagggcctatcaggcgatgaggtgaggaaggagttggacact
ctcctggaggatgtgggcctgctgcacaaacgccacgaacagaccaggaacctgtctggt
ggtatgcagaggaagctgtcggtggccatagcatttgtggggggttcgaaggtggtggtc
ctggatgagcccacagctggggtggacccctactcccgtcgaggcatttgggacctgctg
ctcaagtaccgcaaagatcgcaccatcatcctctccacccactacatggatgaggctgac
cttctcggagaccgcatagccatcatctcccaagggaagctgtgctgctgcggctccccc
ctcttcctcaaggccaagctggggacgggctactacctcaccgtcgtcaagaaggaggga
ctggatactcgaacccccagtagtgccagcgctaccaaactgccccctgccacaaaggac
agtgactcctccatgagtgacgacacaggtctgggcagtgatgttagtggctcagacctg
gctgccctgttgaccctggcgcagcgtcacatccccggggcgcggctggtggaggacgtg
ggccgtgaggcagtcatcaacctgccccagaagtcggcagaggacagcagtctggccatc
ttcctcacagagcttgacaggaggcaggctgatctgggcatcaccagctacggcctgtct
gacaccaccctggaggagatctttctgagagtggctgaggagacaggggtggacgtggac
ccagaggacagcccagcacaagctgacacaccccatgggcagggtcaaggacagggcttg
tctggagagccatctgaggatccaggaagaaaacggcttcgcaagcaagagccccaggag
acagacctgctgagtggggatggccatggcggtgtccctctgaccggttggggtttgacg
tggcagcagctccgtgctctcttcatcaagaggtggctgtatgccctccgcagtcgcagg
ggcttcttcgctcagatcgtgctgcctgctgtgtttgtgttgatcgctctccttttcagc
ctcatcgtccctccgttcggaaagtacccctcgctccagcttcagccctggatgtacggg
gaacagtacaccttcttcagcaacgatgcccctggggatcctgccattcagaatctgctg
gatgctcttctggaccggcctggatttggaaccaagtgcatggaaaacagcacggatcct
cagtgtttgcaggaagaggaaggcattttcatgaggccccagattctctactccacctgg
cagctcttcaacaggggcaactggactgcagacaagccatctcctgactgtgagtgcagc
tctgaggaggtccgcaggatgctaccagactgccctgaaggagccggaggcatcccccct
ccacaggtccagagattgacaggggatatcctgcagaatatgaccggtcgcaatatctcg
gactacctggtcaagacttaccctcagataatgaagaaaagcctaacttcagccactaag
aagtggatcaatgaattcagatatgggggcttctctctggggggcagaggtactcaggct
gtcccacaggcctaccaaatggaggactcagtcatgtctatacggtcacgttacaaagtg
gcacagaatagctcattggatcagctcctgggtcgactaccagagtttctaggtggactg
aatagtcagaacaatgttaaggtgtggtataacaacaagggttggcacgccatggcatcg
tttgtcaatgtcatgaacaatggcctgctccgtgccagcctgcccccagggccagagcga
atgaagtatggcataaccgcctacaaccaccctctcaacctcaccaaggaacagctcact
gaaattgccatgatgaccacctcagtagatgttctggtgtccatctgtgtgatcttctcc
atgtcctttgtgccggccagctttgtgctgtttctcatcgaggagagggtcagcaaagcc
aagcaccttcagtttgtcagcggagtccggcccattctctactggctggctaacttcacc
tgggacatgctgaactatacagtcccggccactatggtggtgctcatcttcatttgcttc
cagcaacagtcctatgtgtctgaaaccaacctccctgctctggtcctgttgctcttgctt
tatggttggtctatcactcctctcatgtatccagcctccttcctgttcagtgtccccagc
actgcttatgttgtcctcacctcaatcaacctcttcatcggcatcaacggcagcatagcc
acctttgtcttggagctgttcgtagatcagcacttgaacgatatcaacaagatcctaaag
aaagtcttcctgatcttcccccacttctgtctgggtcgaggcctcatcgacatggctaag
aaccaggctatgttggatgctttccagagactgggcgcaaagcagaccctggaccccctg
gaatgggactttgtggggaagaacttgtttgccatggctgtggagggtgtcgtgttcttt
ctcttcacaatactgctacagtacaagttctttgtcaactgcaggccctgctctgagctt
gagttgcctcctcttggcccggaggatgaggacatcgccagggagagggagagagtgaag
agtgggaaagcccaagccgatatactcaccatgatggacctgagtaaggtgtacaaagct
ggcaagaagccagcagtagatcgtctgtgtctgggtattcctcgtggtgagtgctttggc
ctgctgggggtaaatggggctgggaagacctccacgtttcgcatgctgactggagacact
gcgatcacctacggagaagcatttctcagtcatcacagtgtgctgacggagatggagcgg
gtccaccagctgatgggctactgcccccagtttgatgccatctgcgacctgctgactggc
agggagcacctggagttctacgctaggctccgaggggtgccagaggagtctgtggctaag
gtggctcaatggggagtgaagaagctgggactgacccagtatgcagagcgagaggccgga
ggctacagtggaggcaacaaacgcaaactctccactgctatctccctgatcggagctccc
cctgttatattcctggatgagcccaccactggcatggaccccaaggccaagagattcctg
tggaactgcatcctgagcgtcatcaaggagggaagggccgttgttctcacctcccacagt
atggaggaatgtgaagctctctgcacacgaatggccatcatggtgaacggaaggttccag
tgtctgggctccgttcaacatcttaagaacaggttcggggacggctacacgatcgtcctg
cgcctgtcggggtccaagcctcccgaggatccgtgcacagtggacacctacatcaagggc
tccttcccgggcatcgagctaaaggagaggcaccagaacgtgctgcagtaccagctgccc
tcccactcctgctccttggcgcgggtcttcgatgtgctttccaacaaccacgaggagctg
ggcatcgccgactactcagtgtcacagaccaccctggaccaggtgtttgtcaactttgcc
aaagagcagagcgatgatgacctgctgagggaagtgacagtcaacggtgggacaccagca
cctcaacccagaagagcggcccagcccacccaaccagggcaaacagccaaaccagctcaa
acaaccaagcctccccagtctgtcaactcctcagacggcagacccagagagaccaagcca
aacggggtcacagacagtggcatggcgatgaccagcaggccacaggagaaaccccagtcg
agcaggggagagagcaggagagagttgagtagtcggaggtcaagcaaggaatcgtctgcc
aacggatccaagggcacaagggagacttcaggcagtaaggatccgaccagtctgttccta
gtgggtagcagcacacaagacagcagtgtgtaa
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integrated database retrieval system
