Oncorhynchus keta (chum salmon): 118401460
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Entry
118401460 CDS
T09424
Symbol
comp
Name
(RefSeq) cartilage oligomeric matrix protein
KO
K04659
thrombospondin 2/3/4/5
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04145
Phagosome
oke04510
Focal adhesion
oke04512
ECM-receptor interaction
oke04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118401460 (comp)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118401460 (comp)
09144 Cellular community - eukaryotes
04510 Focal adhesion
118401460 (comp)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118401460 (comp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118401460 (comp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oke04147
]
118401460 (comp)
00536 Glycosaminoglycan binding proteins [BR:
oke00536
]
118401460 (comp)
Membrane trafficking [BR:
oke04131
]
Endocytosis
Phagocytosis
Opsonins
118401460 (comp)
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118401460 (comp)
Exosomal proteins of colorectal cancer cells
118401460 (comp)
Exosomal proteins of bladder cancer cells
118401460 (comp)
Glycosaminoglycan binding proteins [BR:
oke00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118401460 (comp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
COMP
EGF_3
EGF
Motif
Other DBs
NCBI-GeneID:
118401460
NCBI-ProteinID:
XP_052331128
LinkDB
All DBs
Position
22:38956026..38970204
Genome browser
AA seq
747 aa
AA seq
DB search
MLWILVLVISLSVSSELVAGQRDGEILNQIKGTNQALAEIKELLKQQIQEIVFLKNTVME
CEACGMQGPSRPSCDPNPCHPGVKCIETAGGIKCGPCPEGMVGNSTRCMDVDECVVKPCH
MGVRCINTSPGFRCGPCPTGYTGPQVQGVSLSYATKNKQVCKDINECEGPKNGGCVENSN
CVNTPGSFRCGLCKAGYVGDQRKGCKPERACGNGQPNPCHASGECIVQRDGKIECQCGVG
WAGNGYFCGSDIDIDGFPDEKQECAERNCAKDNCQTVPNSGQEDADKDGIGDACDEDADG
DGILNTQDNCVLVPNVNQRNVDEDDFGDACDNCRMIKNNDQKDTDIDRLGDECDEDIDGD
GIPNNLDNCKRVPNTDQKDRDGDKVGDACDSCPYVPNPDQLDMDNDLIGDPCDTNKDSDG
DGHQDSQDNCPAVINSAQLDTDKDGLGDECDNDDDNDGIPDLLPPGPDNCRLIPNPLQED
SDGDGVGNVCENDFDNDTIIDSIDVCPENAEVTLTDFRAYQTVVLDPEGDAQIDPNWVVL
DQGREIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTVTDDDYAGFIFGYQDSSSFYVVMW
KQVEQIYWQANPFRAVAEPGIQLKAVKSNTGPGENLRNSLWHTGDTSDQVKLLWKDARNV
GWKDKTSYRWFLQHRPQDGYIRVRFYEGPQLVADTGIIIDTTMRGGRLGVFCFSQENIIW
ANLRYRCNDTIPGDFDTYQAQQVQLQF
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggatcctggtgttggtgatttctctcagtgtgagcagtgagctagtagctggt
cagagagatggagaaatcctcaatcagatcaagggaacaaatcaagctctggctgagatc
aaagaactgctgaaacaacagatccaagagattgtgttcctgaagaacacagtgatggag
tgtgaagcctgtggcatgcaaggtccctctcgcccctcctgtgaccctaacccctgccac
ccgggggtaaagtgcattgaaacggctggcggcatcaagtgtggcccctgccccgagggc
atggtgggcaacagtacccgatgcatggatgtggacgagtgtgtggtgaagccttgccac
atgggtgtgcgctgcataaacacgtccccaggtttccgctgtggcccctgtccaactggc
tacactggccctcaggtgcagggagtaagcctctcctacgccactaaaaacaaacaggtc
tgcaaggacatcaatgagtgcgaaggacccaagaatggaggttgtgtggaaaattccaat
tgtgtaaacacacctggctcgtttaggtgtggcctctgtaaggcaggctatgttggggat
cagcgcaagggctgtaagcctgagagagcatgtggtaatggccagcccaacccctgccat
gccagcggagagtgtattgtccaacgagatgggaaaatagagtgtcagtgtggggtggga
tgggctggcaatggctacttctgcggatctgatattgacattgatggcttccctgatgag
aaacaggaatgtgccgagaggaactgtgccaaggataactgtcaaacggtacccaactct
ggccaagaggacgcagacaaggatggtataggagacgcctgcgatgaggatgcagatggg
gatggaatcttaaatacacaggacaactgtgtgctggtaccaaacgtcaaccaaagaaac
gtggacgaagacgactttggagacgcctgtgacaactgccgtatgatcaaaaacaacgac
cagaaagacactgatattgatagactgggtgacgaatgtgacgaagacattgatggcgac
gggatccccaataacctggacaactgcaaaagggttcccaatactgaccagaaggatcga
gatggggacaaagtcggagatgcctgtgacagttgcccttacgttcccaaccctgaccag
ttggatatggacaacgacttgatcggagacccttgtgacaccaataaggacagtgatggt
gacggtcaccaggactctcaggacaactgccctgcggtcatcaacagcgcccagctggac
acggacaaggatggcctgggggacgagtgtgacaacgacgatgacaatgatggtattcct
gaccttctgcccccgggaccggacaactgtcgcctcattcccaaccctctgcaggaggac
tctgacggtgatggggttgggaatgtgtgcgagaacgactttgacaacgacaccatcatc
gacagcatcgatgtgtgcccggagaacgctgaggttactctcacagacttcagggcctac
cagacagtggtgctggacccggagggagacgcacagatagatcctaactgggtggtgctc
gatcagggtagagagatcgtccaaactatgaacagtgaccctggactggctgttggttac
acggctttcaacggcgttgacttcgaagggacgttccatgtgaatacggtaacagacgac
gactatgcaggcttcatctttggctaccaggactcttcctccttctacgtagtgatgtgg
aaacaagttgagcagatctactggcaggccaatccgttccgagctgtggcagaaccaggg
atacaactgaaggctgtaaagtccaacacgggaccaggggaaaatctacgtaactccctg
tggcacaccggagacaccagtgaccaggtgaagctgctgtggaaagatgcccgcaacgtg
ggctggaaggacaagacctcctaccgctggttcttgcaacacaggccccaagatggatac
atcagggtgcgtttctatgagggtcctcagctagtggcagacacaggcatcatcatagac
accaccatgagaggaggcagactgggcgtcttttgcttctctcaggagaacatcatctgg
gctaacctacgctaccgctgcaatgatacaatccctggggacttcgatacataccaagcc
caacaggtccagctgcagttctaa
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