Oncorhynchus keta (chum salmon): 118401495
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Entry
118401495 CDS
T09424
Symbol
trmt13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oke03016
]
118401495 (trmt13)
Enzymes [BR:
oke01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
118401495 (trmt13)
Transfer RNA biogenesis [BR:
oke03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
118401495 (trmt13)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
Motif
Other DBs
NCBI-GeneID:
118401495
NCBI-ProteinID:
XP_035654946
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All DBs
Position
22:40851794..40861201
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AA seq
468 aa
AA seq
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MEVPTADGVSAPLPGRCAFYVEKKKRYCKMIVGSGKAYCGEHANAEKDCEKKRIPCPLDP
KHTVFEDLLAKHLKKCNSREKPKPLFYVQDINAGPAIVEDTLKDEVPLSDRSKAELNLLI
KKLKTAVKGFKCKHEENIQSHPALHDALNDPKNGDSAFKHLKQQASLLGNMEDLHLLEPN
RCFVEFGAGKGKLSHWIHVALKAYDDIHFLLVERSSARFKVDGKHQNSDTKFERLQVDIQ
HLDLRKVPLLQEKGLPVVGVGKHLCGAATDLALQCLLGSSETAPHGIKDQPPSKRSKLQQ
QPGESTGPELQPIPRVAGETAAGQELRVGGVAIALCCHHRCDWRHYVGKEFFKEKGLGAS
EFAAFLRMSSWATCGSRQARQTSPPQGQTDQTFEEEEHEATEEAELDSLEGVLNAEDREH
IGRLCKLLIDQGRVHFLQQKGFDSRLLYYTSSDVSLENVLLTALPASR
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggaggtccccaccgcggacggcgtgtctgcacctctgcctggaagatgtgctttttac
gtggaaaagaaaaaacgatactgcaaaatgatagttggaagtggaaaagcatattgtggg
gaacatgctaatgcggaaaaggactgtgagaaaaaaagaataccatgtcctctggatcca
aaacatactgtattcgaagatcttttagcaaaacatctgaagaagtgcaactccagagag
aaacccaaacctctgttctatgtgcaagatattaatgctggaccagccattgttgaggac
accctcaaagatgaggtacctttatcagatcgcagcaaagcagagttgaacctgctcata
aaaaaactgaagactgccgtcaaagggttcaaatgcaaacatgaagaaaatatacaatct
caccctgctctccatgacgctttgaatgatccaaagaatggggactctgcattcaaacac
ctgaagcaacaggcgtcccttttaggaaacatggaggatttgcacctgcttgaacctaac
aggtgttttgttgagtttggtgcagggaaaggcaagctttcccactggatccatgtcgct
ctgaaagcctatgacgacatccatttcctgcttgtggaaagatcaagcgctcgttttaaa
gtagatggcaaacaccagaattctgataccaaatttgaaagactacaagtggatattcag
caccttgatttgcgtaaagttcctctcctccaagaaaagggacttccagtggttggagtg
ggcaaacacttgtgtggcgcagcaacagaccttgctcttcaatgcctactgggcagctca
gagactgcgccccatgggatcaaagatcagccacccagcaagcgctcaaagctccagcag
cagcctggagagtctacaggaccggagcttcagcccattcccagggtggcaggggagaca
gctgccggccaggagctgagggtgggtggggtggccatcgccttgtgctgccaccaccgc
tgtgactggaggcattatgtaggcaaggagttcttcaaggagaaaggacttggtgcctct
gagttcgctgccttcctgcgcatgtcaagttgggcgacctgtggctcgagacaagcgaga
cagacctctccaccacaaggtcaaactgaccaaacatttgaggaagaggagcacgaggcg
acagaagaggctgaactagacagcttggaaggagtgttgaatgctgaggaccgtgaacac
ataggacgcctgtgcaagctgctgattgaccagggcagggttcacttcctgcagcagaag
ggatttgactcccgcctactctactacaccagctcagatgtttctctagaaaacgtgttg
ctgactgcacttcccgcctcgcggtga
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