Oncorhynchus keta (chum salmon): 118401806
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Entry
118401806 CDS
T09424
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118401806
Ion channels [BR:
oke04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
118401806
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
LPD1
Motif
Other DBs
NCBI-GeneID:
118401806
NCBI-ProteinID:
XP_052332332
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Position
23:12331454..12406694
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AA seq
1166 aa
AA seq
DB search
MDKNEVPPGSSAATMKKKAAGGSGCSHISAPKAATSNCTRSKSSNCVESAPAAAASQSAP
NVKQPGVASNVVIDGAEDGEDESKFQYPRLRRTGGSGRGGGGGGGSIRMENFTPGGGAAA
TATRKNSTNNESILLQTEGAPAATKPTVASKATDTTTCPGDAAGRCETNRASGAEASGAA
VAVEVLNATAGACNNSTAPISRMKCNKNGECRRDSGTGSLRSIISNKTAGAGRAEDGSLR
RGACNSARASMDGSATGSMTQGQGEGSANPSVTPVSTGVPEKKDSRVSFSNAPSRKASSS
LHGSTQTQTTQQPRNSVTFQKPEDGSQIQAEDADADGSTFMQRQFSAMLQPGVNKFSLRM
YGSQKAVEREQERVKSAGNWIIHPYSDFRFYWDFTMLLFMVGNLIVIPVGITFFNDGTTT
PWIIFNVISDTFFLMDLVLNFRTGIIIEDNSDIILDPKTIKKTYLKTWFIVDFVSSIPVD
YIFLIVEKGIDSEMYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLAS
AVMRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPQDCWVSLNKMVNDTWSELYSFAVFKAM
SHMLCIGYGRQAPESLSDIWLTMLSMIVGATCYAVFIGHATALIQSLDSSRRQYQEKYKQ
VEQYMSFHKLPSDFRQKIHDYYEHRYQGKMFDEDSILEELNEPLREEIVNFNCRKLVASM
PLFANAEPNFVTAMLIMLRFEVFQPRDYIIREGTIGKKMYFIQHGVCNVITKGTLGMKLS
DGSYFGEICLLTRGRRTASVRAETYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDR
IGKKNSILMHKVQHDLNSGVFNNHENEMIQEIVKYDREMVKLVDLQRPRTMSMTSSVPGG
MFSPAGPSGVGALASLQQAVAMSFCPQGMGPMAGSGTLQSPRMLRRFQVVHSLSQSPVSA
SPLQSQPPQMAHATGVFGSAISSPPVQSPLAHPGRTFQYMGGVGPSGSQLSLVQHHVPSP
THTIQRPSSQKSTHSLHSGTLSQDARVLSASQLSLPQDGTPPAGPSPPQSTHPSTHASST
SIGPPQPTHPSQPGPSGVGVQVGGRPAGVPQRVAFASTPPPGGAPGMGAAAAAAGSGLPA
PGAPKKDSIVSIPELDSARNRLSSNL
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggacaagaatgaggttccaccaggctcatctgctgcgaccatgaaaaagaaggcggca
ggcggtagcggatgtagccacatcagcgcgcccaaagctgccacgtccaattgtacgaga
agcaaaagcagcaattgtgttgagtctgcccccgctgcagctgccagccagagcgccccg
aatgtgaagcagcccggtgtggccagtaacgttgtcatagacggtgcggaggacggtgag
gacgagtccaagtttcagtatccgcggctgcgccgaaccggggggagcggcagaggcggt
ggtggtggaggcggtagtatcaggatggagaactttacgccaggaggtggagccgcggcc
acggctaccagaaagaactccaccaacaacgagtccatcctactgcaaacagagggtgcg
cctgctgctactaagcccactgtagcatccaaagcgactgataccacaacctgtccggga
gatgctgccgggcgctgcgagaccaacagagcgtcaggggcggaagcgtctggagcagcg
gtcgcagtagaggttttaaacgccacagcaggtgcttgtaacaacagcaccgctccaatt
tcaagaatgaaatgcaacaaaaacggagaatgcaggagggactccggcaccgggagcctg
cgctcgatcatctccaacaagactgccggggcggggagggccgaggacgggtcccttagg
cgtggtgcctgtaactcagccagggccagcatggatggctccgcgacaggctccatgacg
cagggccagggggaaggtagcgcaaaccccagcgtcacccctgtttccaccggcgtcccc
gagaaaaaggactccagggtgtccttctccaacgcgccaagcaggaaagcctcctcatcg
ctgcacggatcgacccagacccagacgacccagcagcctagaaactcggtcaccttccag
aagccggaggatggatcccagatccaggccgaggatgccgacgctgacggaagcaccttc
atgcaacgacaattcagtgccatgctgcagcctggagttaacaaattctccttacgcatg
tatgggagtcaaaaggcggtggagagggagcaagagcgggttaaatcagcgggcaattgg
attatccacccctacagtgatttcaggttctactgggatttcacgatgcttctcttcatg
gtgggtaacctgattgtcatcccggtgggcatcaccttcttcaacgatgggacgaccact
ccctggatcatcttcaacgtcatctccgacaccttcttcctcatggacctggtcctcaac
ttccgcactggcatcatcatcgaggacaactctgacatcatcctggaccccaagaccatc
aagaagacgtacctgaagacctggttcatcgtggactttgtctcctccatccccgtggat
tatatcttcctgatcgtggagaaggggatcgactctgagatgtataagacggccagggcc
ctgaggatcgtacgcttcactaagatcctgagcctgctgaggctgctgaggttgtcccgg
ctcatccgctatatccaccagtgggaagagatcttccatatgacctatgacctggccagt
gcagtaatgcgtatcttcaacctgattggtatgatgctgctgttgtgtcactgggatggc
tgtctgcaattcctggttcccatgctgcaggacttcccccaggactgctgggtctccctc
aacaagatggtgaatgacacatggtctgagctgtattcatttgcagtgttcaaggcaatg
agccacatgttgtgtatcggctacggtcggcaggccccggagagcctgtctgatatctgg
ctcaccatgctcagcatgatcgtaggggccacctgctacgctgtgttcataggccatgcc
actgcactcatccagtccctggactcgtcccgacgacagtaccaggagaagtacaaacaa
gtggagcagtacatgtccttccacaagctgccatccgacttccgacagaaaatccatgac
tattatgagcaccggtaccaggggaagatgtttgatgaagacagcatcctagaggaactg
aacgaaccactcagagaggaaattgtcaatttcaactgccgtaagctggtggcgtccatg
ccgctgttcgccaacgcagagcccaactttgtgacagccatgctgatcatgctccgcttt
gaggtcttccagcctcgtgattacatcatcagagagggcaccattggcaagaagatgtac
tttatccagcacggagtctgtaacgttatcaccaaggggaccctgggaatgaagctctct
gatggctcctactttggagagatctgtttgctgacgcggggtcggcgtacggccagcgtc
agagcggagacatactgccgtctctactccctgtctgtggacaactttaatgaggtgcta
gaggagtatcccatgatgagacgggcctttgagaccgtggccattgaccgactggaccgc
ataggcaagaagaactccattctgatgcacaaagtgcagcacgacctcaactccggcgtt
ttcaacaaccatgagaatgagatgatccaggagattgttaagtacgaccgtgagatggtc
aaactagtggaccttcagagaccccgcaccatgtccatgacatcctccgtccctgggggc
atgttctcccccgcaggcccatccggagtcggggccctcgccagcctccagcaggctgtg
gccatgagcttctgcccccaggggatggggccgatggcagggtcagggacgctgcagtcc
ccccgtatgttgcggaggttccaggtggtccatagcctgtcacagagccctgtttccgca
tctcctctccagtcccagccaccacagatggctcatgcaacaggagtgtttgggtcggct
atttccagcccaccagtccagagccctctggcgcatccaggacggacattccagtacatg
gggggagtggggccgtctgggtctcagctgtccctggtgcagcaccacgttcccagcccc
acgcacaccatccagaggccctcctcacagaaaagcacccactcgctccactcaggcacc
cttagccaagatgcccgtgtcctctccgcctcccagctctccctccctcaggatggaacc
cctcctgccggccccagccctccccaatctacccacccatccacccatgcctcctccacc
tccattggcccccctcagcccactcaccccagccagcctgggccctctggggtgggggtc
caggttggggggagacccgcgggagttccacagcgggtggccttcgcctccactcctccc
ccaggaggagcacccggcatgggagcggctgcagcggcggctgggtcggggctcccggcc
cctggagctcctaagaaggattcgatcgttagcataccggagttagactcagcccggaac
cggctgtcttccaacttgtga
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