Oncorhynchus keta (chum salmon): 118401854
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Entry
118401854 CDS
T09424
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118401854
Cell adhesion molecules [BR:
oke04515
]
Cadherins
Protocadherins
118401854
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
TMEM154
Motif
Other DBs
NCBI-GeneID:
118401854
NCBI-ProteinID:
XP_035655374
EnsemblRapid:
ENSOKEG00005015115
LinkDB
All DBs
Position
23:complement(15553048..15557233)
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AA seq
1003 aa
AA seq
DB search
MCMRGWNWWVLVGIPLAVLPTLTQGKTVKYETFEEDAPATVIGNLAKDISSSPSSGSKTN
FRMMKQFNSSFIRLRESDGQLTIGERIDRERICKHTLHCLVAFDVVSFSKEQFKLIHVEV
EVKDINDNSPEFPRKESSLEISENTAVGTRIPLDFAVDEDVGVNYIQSYQISVNSHFTID
VLSRADGVKYAELVLMKELDRETQASYALQLVAMDGGNPSRTGSTRINIKVKDYNDNSPL
FDRSSFTVDLPEDAPVGFLLLDLNAEDPDEGLNGEVVYGFGHQVPSEIRQLFRVDRKTGR
LTLESPIDFESKKTYEFNVQAADLGLNPSPAICKIVVRVQDVNDNAPEISITPMTSITAG
IAYITEAASRESFVALVSTSDMDSGANGQVHCTLYGHDHFRLQQAYEDSFMIVSTSPLDR
EKIPEYNLTVVAEDLGSPPFRTITQYTIRLMDENDNAPVFSKSAYEVAVVENNTPGAYIT
TVVARDMDLGHNGKVIYKLADTYIMGSPVSTFVSLDPASGSIYALRSFNYEVMKQLELCI
TASDGGSPPLTGTASIHVRIVDQNDNSPVINQPALNNGSSEILLPRDAPSGYVITRVEAR
DADEGVNAELSYRLASGEGSVFSVNKATGEVYLNRELSHDVDETLRMTVTVSDNGRPALT
ATATLHFLIIVGAPPNDRTVYWAGSGEHAQWDLSVVIIIVLAGSCTLLLLAIILIATTCS
RRKRDKTGDDTDSYGEKETLERGKNISDNPLLPLHGTVGGFEAHTFSSQPGFTGGHTGSS
DLCSTSEDGREAPCVYEPDSKPKGYSTLPGYGNNYNNGKEAVRPITIWKGNSYTTISARD
PAFSGKDSGKGDSDFNDSDSDISGTDLKKEVVLVHPMGCHSGLWACTSECKVLGHSDRCW
SPSAVRAHIGPSLVPTPTSQTVSSFNSFSKTASLPRDSLRRDNYYQAHIPKTTGLQSVYE
KVLHKEYDYVLVTPPRPLRVQEISDITIPVYSPTTTRCPSNEV
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgtgtatgagagggtggaactggtgggtgctggtgggcatcccactggctgtcctgccc
actctcacgcagggaaagacagtgaagtacgagacatttgaggaagatgccccggcaact
gtcattggaaacttggccaaggacatttcatccagcccctcctccggctccaagacaaat
ttcaggatgatgaaacaattcaactcgtcttttatccgtttgagggagagcgacggacag
ctgactatcggagagagaattgacagagagagaatctgtaaacacacccttcactgcctc
gtcgcctttgatgtggtaagcttttccaaagagcagttcaaactcatccacgtcgaggta
gaggtcaaggacatcaacgacaattcccccgagtttccacggaaagagtcgagtctggag
atctctgaaaacacagcggtgggcacgcggatcccgttagacttcgcggtggatgaagat
gtgggggtgaattacattcagagctaccagatctccgttaacagtcacttcaccatagac
gtgctcagcagagccgacggggttaaatatgcggagctcgtgctcatgaaagagctggac
cgtgagacacaggcttcctatgcgctccagctggttgctatggacggcggcaacccgtcc
cgcacgggatccacgcgcatcaacatcaaggtgaaagactacaatgacaacagtcccttg
ttcgacaggagcagttttacagtggacctccctgaggatgcaccagtagggtttctctta
ctggacctgaacgcagaagacccagatgaggggctgaatggggaggtggtgtatggtttt
ggtcaccaggtgccatccgagataagacaacttttcagagtagaccgcaaaacgggaagg
ctcaccctcgagagccccattgactttgagagcaagaaaacgtacgaattcaatgtccag
gcggctgacctgggtctgaacccaagcccggccatctgtaagatagtggtgcgggtccag
gacgttaacgacaacgctccagagatctccatcactcctatgacgtccatcacggcggga
atcgcctatatcacggaggctgcatcgcgcgagagttttgtagcgctggtcagcacctct
gacatggactctggagctaacggacaggtgcactgtacgctctatggccacgaccacttc
aggctgcagcaggcgtacgaggacagcttcatgatagtgagtacgagcccgttggaccgg
gagaagatccctgagtataatctaacagtggtggcagaggacttgggctccccaccgttc
agaaccatcacccagtacaccatccggttgatggacgagaatgacaatgcccctgtgttc
agtaaatcggcgtatgaagtggctgtggtggagaataacaccccgggggcctacatcacc
acggtggtcgccagggacatggacttgggacacaacgggaaggtgatctacaagctcgct
gacacgtacatcatgggctccccggtgtctacgtttgtctcactggaccccgcgagcggc
tccatttacgcactcaggagcttcaactacgaagtcatgaaacagctcgaactctgcatc
acagccagcgacggtgggtccccacccctcaccggaaccgcaagcattcatgtcaggata
gtggaccagaatgacaactcacctgtcatcaaccagcccgcactaaataatgggtcctct
gagattctgctgccccgggacgcaccctcaggctacgtcatcacccgggtggaggcgcga
gatgctgatgagggcgtgaacgcagagctgtcctatagactggcatctggagagggttcc
gtgttctccgttaacaaggccaccggagaggtctacctcaaccgcgagctcagccacgac
gtggacgagaccctgcgcatgaccgtcactgtgagtgacaatgggagacctgcgctcact
gccaccgccacgcttcatttcctcatcattgtgggcgccccgccgaatgacaggacggtg
tactgggcaggcagcggggagcacgcacagtgggacctgtcagtggtgattatcatcgtc
ctcgcggggagctgcacactcctgctgttagccatcatcctcatcgccaccacctgcagc
cggcggaaacgggacaagactggagatgacaccgactcgtacggggagaaggagactctg
gaaaggggcaagaacatcagcgacaatccactgctgcctctccatggaaccgtgggaggg
tttgaagctcacaccttctctagccagcccgggtttactgggggacacactggcagcagc
gacctgtgctccacctctgaggatgggagagaggcaccatgcgtctacgaaccggacagt
aaacccaagggctactccactctgcccggctacggtaacaactacaataatggtaaagag
gcagtcagaccaatcacaatctggaagggcaactcctacaccaccatctccgcgagagac
cccgcgttcagcgggaaggacagtgggaaaggcgacagtgactttaacgacagtgacagt
gacatcagtggcaccgacctgaagaaggaggtggtactggtacaccccatgggctgtcac
agtggtctatgggcatgtaccagtgagtgtaaggttctgggccactctgaccgctgctgg
agcccctcggctgtccgtgctcacattggtccctcactcgttcccacccccaccagccag
actgtctcctccttcaacagcttttccaagactgcctcgctgccccgggactcgctccgg
agggataactattaccaggcgcacatccccaaaacaacaggcctgcagagcgtgtatgag
aaggtactacataaggaatatgactatgtcctggtcactcctcccagacccttgagagtt
caggagattagtgacatcactatcccagtctatagtcccaccacgacacggtgtcccagc
aatgaagtctaa
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