Oncorhynchus keta (chum salmon): 118401897
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Entry
118401897 CDS
T09424
Symbol
nfatc4
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 4
KO
K17334
nuclear factor of activated T-cells, cytoplasmic 4
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04020
Calcium signaling pathway
oke04148
Efferocytosis
oke04218
Cellular senescence
oke04310
Wnt signaling pathway
oke04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
118401897 (nfatc4)
04020 Calcium signaling pathway
118401897 (nfatc4)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118401897 (nfatc4)
09143 Cell growth and death
04218 Cellular senescence
118401897 (nfatc4)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
118401897 (nfatc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118401897 (nfatc4)
Transcription factors [BR:
oke03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
118401897 (nfatc4)
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GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
118401897
NCBI-ProteinID:
XP_035655461
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Position
23:16980231..16988094
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AA seq
892 aa
AA seq
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MGAAPGSGWEEGEFEFKLVFEEDPTRQLRGPSPLCNADQEHTIVGERTESALSLLESSNT
ESHLDTTHVGQPIGIPTPTYSSASQRAGMHSPPPRRALVREFSGTYESLPARSVQVSESH
VLECPSIQITTISPEDVTAPVGSNFWDTGGGWDRERLYLPLMDPFCYREGSTGAGSLSPS
PASSPSSRGWLSPASSCDSLLVEEEELNEVTSHFCLSPSSRPTSPGGKKRRNSPLASPCT
SRRSSYSEDHSCTLEGEDSTSQSQAHNSSFELSIPQKTRKTSLEQVSPRDVEQEQSPAHS
SHCPLPEPLQQRREVATMGMDYLSVPPALGWGRTRASAHSPMFRSNALPPLDWPLPTQFD
QYELRIEVQPRPHHRAHYETEGSRGAVKASPGGHPVVTLTGYTERQPLSLQVFVGTADDR
SIRPHPFYQIHRVTGKMVGTASQESVQAGTKILDIPLNPETNMTALIDCAGILKLRNSDI
ELRKGETDVGRKNTRVRLVFRTHLPLGLPVAPPGRMLALQVTSVPIECSQRSAQELPVVE
SVSVISCSVEGGEELLLGGSNFLPMSRVLFMERGTDGKLQWEEEAHVDRDNSSECLLCVQ
IPAYGDLSVNHPVSVCLYVSNGKRKRSSTHCFKYLPVMFKEDDPLLSHPSVLPLEEVTLC
SMGGGSRVDRGLHLRNDPTPKERGLALHLPPYPSAYSPPYQGHGYQEEYCHKPEAVGDSR
GSLSERRPSFENLELGFTELLPPLYPRVSQPPSPSPWLDSPYLSSSPSPSHSSSLSPFPA
GSPISSSSLPHMTTSPYPHYPYPQEVCHSPPSNSSPYQDFYPPPYSHNEVWDHQGRGPRE
REAQAGSKMQTTPLEFASSSSIHHITLEEVNEFIGEDIRSFQSGSQTDSQPG
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgggggctgcgccgggttctggttgggaggagggggagttcgagttcaagttggttttt
gaggaggacccgacgcgccaactccggggcccatccccgctgtgcaacgcggaccaggag
cacactatcgtgggggagaggacagagagcgccctgtcgctcctagagtcgagcaatact
gagagccacctggataccactcacgtaggccagccaatcggcatccctaccccaacgtat
tcttcagccagtcaaagggctgggatgcattccccgccccccaggcgtgccttggtgagg
gagttcagtgggacctatgagagccttccagcgagatctgtacaggtgtcagagtcccat
gtgttggagtgccctagcatccagatcaccactatctccccagaggatgttactgcccca
gtaggaagtaacttctgggacacagggggtggatgggacagggagcgcctctaccttccc
ctaatggacccattctgctaccgcgaaggcagcaccggcgctgggtccctgagcccaagc
cctgcctccagcccctcctctcgcggctggctcagtcctgcgtccagctgtgattcgctg
ctggtggaggaggaggagctcaatgaggtcacctcccatttctgcctgtcaccctcctcc
cggcccacctcaccggggggtaagaagcgcaggaactcccctctggcctccccctgcacg
tcccgcaggagcagctactctgaggaccactcctgtaccctggagggagaagactccacc
tctcagtcacaagctcacaacagcagctttgagctgagcattccacagaaaactaggaag
acgtcactggagcaggtctcccccagggatgtggagcaggagcagagtccagcccatagc
tcccactgcccactgccagagccactgcagcaaaggagagaggttgcaaccatgggcatg
gactacctgtctgtgccccctgctctgggctgggggaggaccagagccagcgcccacagc
cctatgttcagatccaatgctctaccgccacttgattggccactgccaactcagtttgac
caatatgagttgcgtatcgaggtgcagccccgcccacaccaccgagcccactacgagaca
gaaggaagcagaggagccgtcaaggcatcaccagggggacatccggttgttacgctgact
gggtacacagagagacagcccctctctttgcaggtgtttgtgggaacagctgatgacagg
tccatccggcctcatcctttctatcagatacacagggtaacaggtaagatggtgggtact
gccagtcaggagagtgtacaggctggcaccaaaatactggacatccccctcaacccagag
accaacatgactgccctcattgactgcgctggcattctgaagctgaggaactcggacatc
gagctgaggaaaggagagacagatgtagggaggaaaaacacacgtgtgcgcctagtgttc
cgtacccacctcccccttggccttcccgtggccccgcctggacggatgctggccctgcag
gttacctccgtgcctattgagtgctcccagcgctctgctcaggagctgccagtggtggag
tcagtcagtgtcatatcgtgctctgtggaaggaggggaggagctactgttgggtggatct
aacttcctgcccatgtccagagtgctttttatggaaagagggacagatggaaagctacag
tgggaagaggaggcacatgttgaccgtgacaacagtagtgagtgcttgctgtgtgtgcaa
attccagcctatggtgacctgtctgtgaaccacccagtatctgtgtgcctttatgtctcc
aacgggaagaggaaaaggagcagcactcactgtttcaagtacctgccggtcatgtttaaa
gaggacgaccctctgctctcgcatccctctgtcttgcccctggaggaggtgacactctgc
tccatgggggggggcagcagggtggacaggggtctgcacctgaggaatgatcccacgccc
aaggagagagggctagctttgcacctgcccccctacccttcagcctactctcccccctac
caaggccatggctaccaggaggagtactgccacaagcctgaagctgtgggtgacagcaga
ggttctctgtcagaaagacgccccagctttgagaacttggagctgggcttcaccgagcta
ctgcctcccctgtaccccagagtctcccaacctccctctccctccccatggctggactcc
ccatacctgtcctcctctccttctccctcccactcctcctctctgagtcccttccccgca
ggcagccccatctcctcctcctctcttccccacatgactacctcaccctacccccactac
ccctaccctcaggaggtctgccactcgcctccttccaactccagcccgtatcaggacttc
tacccaccaccatactcccacaacgaggtatgggaccaccagggcaggggacctcgggaa
agggaggctcaggctgggtctaaaatgcagacgacccccctggaatttgccagctcatca
tctattcaccacattacattagaggaagtgaatgagttcataggagaagacatcagatcg
ttccagtcgggctcacagacggacagccaaccaggatga
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