Oncorhynchus keta (chum salmon): 118401968
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Entry
118401968 CDS
T09424
Name
(RefSeq) arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3-like isoform X1
KO
K12491
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1/3/4/5/6/9/11
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118401968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118401968
Membrane trafficking [BR:
oke04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
118401968
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ArfGap
Ras
PH
Ank_2
Ank
Ank_4
Ank_5
Roc
PH_6
Motif
Other DBs
NCBI-GeneID:
118401968
NCBI-ProteinID:
XP_035655589
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All DBs
Position
23:complement(20052470..20447412)
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AA seq
1261 aa
AA seq
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MKTDRFLQLQQFSSNSAAPAAAHPSQIDWENAAVGVEVKAPTAALEQQKTQVETQRQDIS
PQTEVPLPGHHGGVPAGGVLAGGGSPPRAVLRRRPSQDGAAPHNRRAVSMYGAAARQHRG
SLSRQDRQDRPRSVCMLAGPNLNPTLSEPGSHSQHTSRRGATRSLDGPPQQRWTRRAELR
AVDGLKPGVLPQWTVAGAEEKVVPRVRQQTWKPRPVSMTVLELRKKASGSQEGLDSQGGS
QGGGLFGRWRLFGRPAQDKEKEEAPDPGSKPSSKPDAPKNTLSSLRRTLSLRIRRNRPRE
RVDISEVTPEERSRTTSMEQETSLPLRPFSYLTGRTLPPPCERDDDGGRQFIHYHSQGKV
KVMEVPLYPAKLSSSTKLAQEEPSLWQLIARRFRRKEQQQPSNGNCELQPRHQSKETAKY
SLGRIKKPQSVAIETLADCNKVQDSFVNSQEWTLSRSVPELKVGIVGNLSSGKSALVHRY
LTGTYVQEESPEGGRFKKEMVVDGQSYLLLIRDEGGPPELQFAAWVDAVVFVFSLEDEIS
FQTVYNYFLRLSSYRNTAEVPMVLVGTQDAISAANPRVIDDSRARKLSNDLKRSTYYETC
STYGLNVERVFQDVAQKVVALRKKQQLSIGPCKSLPNSPSHSSVPNASIPSVHINQSANG
GGVFSDYSSSVPSTPSISQREMRIETIAASNTPTPIRKQSKRRSNIFTSRKANSEQAKNT
DSKTDSIGSGRAIPIKQGILLKRSGKSLNKEWKKKYVTLCDNGLLTYHPSLHDYMQNVHG
KEIDLLRTTVKVPGKRPPRAVTTIAPTTSPKTNGLTKDRSTLQLGVGTAGAPHSNSSTSL
QSEHSVGGGNLVGFGGSKDGMHQRSFSVSSADQWNEAVINTSASTGTANGMAEPLTCSYG
VGSATSPKQEPPPSPHSNRKRHRRKKSTGITKPDGPSTGNEELEESFEFTIVSLTGQMWY
FEASTFEERELWVTAIESQIFASLQSCESMKNKSRLGSQSDAASIQSIRNVRGNSFCVDC
DTANPDWASLNLGALICIECSGIHRNLGTHLSRVRSLDLDDWPVELSMVLMAIGNTMANS
VWEGALEGYTKVGADSTREERERWIRAKYEQKLFLVDVPQSDVPLGQQLLRAVVEDDLRL
VVLLLAHGTKEEVNETYGDGDGRTALHLSCAMANVVITQLLIWYGVDVKSRDARGQTPLS
CARRAGSQECSDILLQHGCPNDPVNSLTTPNMSRRNPDVNPNPNVNNNNALGELNRSVSI
M
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgaagacggaccggtttctccaactccaacagttctctagtaactcagcagctccagca
gcagcccatccttctcagattgactgggagaatgcagcggtaggagtagaggtaaaggca
cctacagcagctctagagcaacagaagacccaggtagagacccagagacaggacatttct
ccccagactgaagtgcctctccctgggcatcatggtggtgtccctgccggtggtgttctg
gccggtggtggctctccaccccgggctgtgctccgcaggaggccatcccaggacggtgct
gctccacacaacaggagggcggtgagcatgtatggagccgcagccaggcagcatcgaggc
tcgctaagccgccaggacagacaggacaggcccaggagtgtgtgcatgctcgcaggcccc
aacctaaaccctaccctatcagagcccgggtcccactcccaacacacctccaggaggggg
gctacaaggtctctggacggtcccccacagcagcgttggaccaggagggcagagctgcgg
gcggtggacggccttaagccaggggtgctccctcagtggacggtggcgggggctgaggag
aaggtggtccccagggtccggcagcagacctggaaaccgagaccggtcagcatgactgtg
ttggagctgaggaagaaggcctcggggtctcaggaggggctggacagccaaggaggaagc
caggggggaggtctatttggccgctggaggctgttcggccgaccagctcaggacaaggag
aaggaggaagccccagacccaggctccaagcccagcagcaagccagatgcccccaagaat
accctgagctccttacgccggaccctcagtctgcggatcaggaggaaccggccgcgggag
agagtggacatttctgaggtgacaccagaggaacgctcacgcactacaagtatggagcag
gagacatctctccccttgcggcccttctcctatctgactgggaggaccctgccacctcct
tgcgagagggacgatgatggagggaggcagttcattcattaccacagccagggcaaggtt
aaggtgatggaggtgcccctctacccagccaaactgtcctcctctactaaactggcccag
gaggagcccagcctatggcagctcatagccagacgctttaggaggaaggagcagcagcaa
ccgtccaacggtaattgtgaactccagccccgacaccagagcaaagagactgccaaatat
tccctgggcaggattaaaaagcctcagtcagttgcaatagagactctggcagactgcaac
aaagttcaagactcgttcgtcaatagccaggagtggacattgagtcgatcagtgccagag
ctcaaagtgggtattgtgggtaatctgtcgagtgggaagtctgccttggtccaccggtac
ctgacaggcacatatgtgcaggaggaatctcctgaaggtggtcggttcaagaaggagatg
gtggttgatggacagagctacctgctgctgatcagagatgagggaggccccccggagctg
cagtttgcagcatgggtagacgctgtggtgtttgtcttcagtctggaagatgagatcagt
ttccagacagtctacaactatttcctgcgtctgtccagctacaggaacacagcagaggtc
cccatggtcctggttgggacgcaagatgccatcagtgctgccaaccccagagtgatcgat
gactcgcgggcgaggaagctgtccaacgatctgaagcgctccacctactacgagacctgc
tccacctatggcctcaatgtggaacgagtcttccaggatgttgcccagaaggtggtggct
ctgaggaaaaagcagcagctgtctattggtccgtgcaagtccctgcccaactctcccagc
cactcatcagtccccaacgcatccatcccctctgtgcatattaaccagtcggcaaacggt
gggggtgtgttcagcgactattcctcctctgtgccctccactcccagcattagccagagg
gagatgcgtatcgagaccattgctgcctccaacacgcccacacccatccgcaagcagtcc
aagcgccgctccaacatcttcacttcacggaaagccaacagtgaacaggcaaagaacact
gacagtaaaacagatagcataggcagtggaagggccatacccatcaaacagggcatcctt
ctgaagagaagtgggaagtccctgaataaggagtggaagaagaaatacgtcacactgtgt
gacaacggccttctcacctaccaccccagtttacatgactacatgcagaatgtgcacggt
aaagagattgacctgttgaggaccacggtcaaggtgccagggaagcgaccacccagagcg
gtcaccaccatcgcccccaccaccagccccaagaccaacgggctgaccaaggaccgtagc
accctgcagctaggagtgggcactgcaggtgcgccccactctaacagtagtacgtccctc
cagtcagagcattcggtcggcgggggaaatctggtgggcttcgggggcagtaaagacggc
atgcaccaacgctccttctctgtgtccagcgctgaccaatggaacgaggctgtcatcaac
accagtgcaagcaccgggaccgccaacgggatggccgagcccctgacctgcagctatggg
gtgggcagtgccaccagtcccaagcaggagcctcccccctcgcctcactccaaccgcaag
agacacagacggaaaaagagcacaggcatcaccaagccagacggaccatctacaggcaat
gaagagttggaggagtcgtttgagttcaccattgtgtctctgacaggccagatgtggtac
ttcgaagcgtctacgtttgaggagagagagctgtgggtcacagccattgagagccagatt
tttgccagcctgcagtcctgtgagagcatgaagaacaagtcccggttaggcagccaaagt
gacgcggcatccattcagtccataaggaacgtgagagggaacagcttctgtgtggactgt
gatacagccaaccctgactgggccagtctgaacctgggggctctgatctgtatagagtgc
tcagggatccacaggaacctggggacccacctgtcgagggtgaggtctctggacctggat
gactggcccgtggagctcagcatggtgctgatggctataggcaacaccatggccaacagt
gtctgggagggggccctggaggggtacaccaaggtgggcgctgacagcaccagggaggag
agggagcgttggatccgggcaaagtatgaacagaagctgttccttgtggatgtcccccag
tcggacgtgcccctggggcagcagctgcttcgggctgtggtggaggacgacctgaggctg
gtggtgctgctgctggcccacggcaccaaggaggaggtcaacgagacgtacggggacggg
gacggacgcactgccctgcacctgtcctgcgccatggccaatgtggtcatcacccagctt
ctcatctggtatggtgtggatgtgaagagtcgggacgctcgcggccagacgccgctgtcc
tgcgcccggcgggcaggaagccaggaatgttctgacatcctgctccagcacggctgcccc
aatgaccccgtcaacagcctgaccacacccaacatgagccgcagaaaccccgatgttaac
cctaaccctaacgtcaacaataacaacgccctcggtgaactcaaccgcagtgtcagtatc
atgtaa
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