Oncorhynchus keta (chum salmon): 118401978
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Entry
118401978 CDS
T09424
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E-like isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04010
MAPK signaling pathway
oke04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118401978
04020 Calcium signaling pathway
118401978
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118401978
Ion channels [BR:
oke04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
118401978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
118401978
NCBI-ProteinID:
XP_052332755
LinkDB
All DBs
Position
23:20966613..21047171
Genome browser
AA seq
2421 aa
AA seq
DB search
MLTSSDKSLSLMPDHCAPAGLTSGPKGSTSSRGMHGTRSSLSLPEPEPWRRTPSPGTTRQ
GGLVQESRSCSLQVPHSGLETLDLPPRAASFDVPYRVEEAGSDTGSGSVSPCSMQRRRGG
IVDQRDVIRAHESHKMQSTPQARRKDWEMARFGDEVQMTMDSRDSGDPERGEDGGDTASG
TGSGTLKQTKAARARTMALYNPIPHRQNCLTVNRSLFIFAEDNLIRKTAKRIIEWPPFEW
VILATITANCIVLALEQHLPGEDKTPMAKRLECTEPYFIGIFCFEFGIKLVALGFVFHKG
SYLRNGWNIMDFIVVVSGILATAGAHMNIPVDLRTLRAVRVLRPLKLVSGIPSLQIVLKS
IMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHHTCLPTADILENETMDTTEVEFACG
VRKCPEKYDCVGSWIGPNDGITQFDNILFAVLTVFQCITMEGWTAVLYNTNDALGFMWNW
IYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQVERELNGYRAWID
RAEEVMLAEENKKSGRSALDVLKRATSKNAKRRGGPGDAEISTIGAPRMRIRTVRRGPVA
YMRRKERMLRISLRRMVKTDTFYWTVLSLVFLNTICVAIVHHNQPDWLSTFLYYAEFVFL
GLFLAEMFLKMYGLGFRLYFHSSFNCFDCGVIVGSIFEVVWGFFRPGMSFGISVLRALRL
LRIFKITKYWASLRNLVVSLMSSMKSIISLLFLLFLFIVVFALLGMQLFGGRFIFEDYTP
TNFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVQYGMWSSIYFIVLTLFGNYTLLNV
FLAIAVDNLANAQELTKDEEEEEEFFNARYARGTDGPMSERRRRPYLRRKKAIHRGRMAV
PEEEEESTAGGGADQPPNGTNAFSNRRDRRRRGGGGGRGGRSVWEQRANQLRKRRQMESQ
EVLFGGSPTEDTTDTPTTAYRAPTLSPDASPGHLPESPMSGIIPMPEPPMSIAIPLPEPP
DSEPVPLFTLAEERAVNHRPTGGERRHRVARKSRPGPGGAEEGGTARHRRHRHREARAEA
KSRESPHEEVSESGSRERKILEEREEKEEKDEKEVKGEFAEVEGGVSGKDEGGALIINLE
SEEEHLRVCIADIPEPPLCDNFPEYLPPPLLEPPPQMEEGEVGETGQCEPLSQDPPVEPA
PEQFADPSELQAAAVVSDSENNQASLNLEEGKESEQGPDSQTSVIIEMSGAQPLLEVTPM
TALHSSKEVEMYHHERKEKKEEEESQVEKEEEEEEASPPKPVPPGSMFLFKASNPIRRIC
HYVVTMRYFEMTILLVIVASSIALAAEDPVCTNSDRNRVLRYFDYVFTGVFTFEMIIKMT
DLGLLLHDGSYFRDLWNILDFIVVVGALIAFALTNNKGRDIKTIKSLRVLRVLRPLKTIK
RLPKLKAVFDCVVTSLKNVFNILIVYQLFMFIFAVIAVQLFKGKFFYCTDSSMDTEKECQ
GYYIDYARDKKEVKKREWKRHEFHYDNVCWALLTLFTVSTGEGWPQVLQHSVDVTEEDMG
PSRGNRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDFT
ISAKPLTRYMPQNRQTFQYRLWHFVASPSFEYTVMVMIALNTVVLMMKYYSAPAAYDTVL
KHLNTAFTVLFSLECILKIMAFGFVNYFRDTWNIFDFITVLGSITEIIVDLQSINTFNMS
FLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIK
LNDENHINQHNNFKTFSGALMLLFRSATGESWQEIMLSCLGGQECEPDSSMAPMTMSPDH
EGGCGTDFAYCYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRVWGE
YDRAACGRIHYTAMYEMLTHMSPPLGLGKKCPRGMAYKRLVLMNMPVDEDMSVHFTSTLM
SLIRTALEIKIARGQGMSGEDRVALDTELQKEISVIWPYLPQKTLDVLVPINKDSDMTVG
KIYASMMIMDYFKQNKAKKLRAQLEAQKASLMPFQRLDASTLSEDILSNAQPLPCMPHSA
GSALTRGGLVALSPLSPQDLLNMQPQTSDTDTRSQHSRTEMASGSMKRSSSAVADQRVNG
LRQEEKKSPDRLYRPRHKSYKAAVSRSERKRQLDTEKERGRSKERRHLLSPDTSRCTSEE
RSLQPSRSPSRERTHPLDKQGNSSDSPLPTSESSTPSRRPLSQTSTRSHPHISYSPLVCR
THPPSGDDDDDRGSPETQRRGEASRDRAGGEGQSGARGRRHQQGSPLRRYPSEPYLALQE
DEHSLDPTGFMETLTFEAAVATSLGRANTVSSTSSSSFSSARRGSRSSWQVPNGHFRKRL
AQTVSVAGCEPLSDTEEDDRC
NT seq
7266 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccagctcagacaaatctctatctctgatgcccgaccactgtgccccagcgggt
ttgacttccgggcccaaaggcagcacatccagtagggggatgcacggcacccgctcctcc
ctctctctccctgagccagagccatggcgccggacccccagcccaggcaccacccgtcaa
gggggccttgtccaggagtcccgctcctgctccttgcaggttccccactccggcctggag
accctggatctacccccgcgtgcggccagcttcgatgtcccttacagggtggaagaggca
gggtcggacacaggctcagggtctgtgagcccctgtagtatgcagaggagacgaggtggc
atcgtggatcagagagatgtgatcagggcccacgagtcacacaagatgcagagcacacca
caggcccgcaggaaagactgggaaatggctcggtttggagatgaggttcagatgacgatg
gattcccgagactccggggacccggagcgcggggaggacggcggggacacggcttcaggt
acagggtcagggacgctaaaacaaaccaaagcggcgagggcgcgcaccatggctctctac
aaccctataccccaccggcagaactgcctcactgtcaacaggtcgctcttcatattcgcc
gaggacaatttaattcggaaaaccgccaagaggatcatagaatggccaccgtttgagtgg
gtgatcctggcgaccatcacggccaactgcatcgtcctggccctggagcaacatcttcct
ggggaggacaagacccccatggccaaaagactggagtgtactgagccttacttcattggg
atcttctgttttgagtttggcatcaagcttgtggccctgggttttgtgttccataaaggc
tcctacctgaggaatggatggaatatcatggacttcatcgtggtggtcagcggaatcctg
gctacagcaggggcccacatgaacatccccgtggacctgcggactctgagggcggtgcga
gtcctgaggcctctcaaactggtctctgggatccctagcttgcagatcgtgctgaagtcc
atcatgaaggccatggtgcctctgctccagatcggcctgctcttgttcttcgccattctc
atgttcgccatcatcggcctggagttctacagcgggaagctccaccacacctgtctacct
acagctgacatcctggaaaatgagacgatggatacgactgaggtggagtttgcgtgcgga
gtgaggaagtgtccagagaagtacgattgtgtcgggtcatggatcggccccaacgatggc
atcacccagtttgacaacatcctgttcgctgtgctcactgtcttccagtgcatcaccatg
gagggatggacagctgtgctctacaataccaacgatgccttgggctttatgtggaattgg
atctactttattcctctcatcatcatcggctctttcttcgtactcaacctggtgttggga
gtcctctccggggagtttgccaaagagagggagcgggtggagaaccgtagagccttcatg
aagctgagacgccaacagcaggtagagagagaactcaacggatacagagcctggatagac
cgagcagaggaggttatgctggctgaggagaacaagaagtcggggagatctgctttagat
gtgctgaagcgggccaccagtaaaaatgctaagcgtagaggaggtcctggggatgcggag
atctccactataggagcacctcgtatgcggatccgtacagtgcggcgtggcccggtggcg
tacatgcgtcgtaaggagcgtatgctgcgtatctccctgcggcgcatggtgaagacagac
accttctactggactgtcctcagcctggtgtttctcaacaccatatgtgtggccattgtc
caccataaccagccagactggctctccaccttcctgtactatgcagagtttgttttcctg
gggctcttcttggcagagatgttcttaaagatgtacggcctgggattccgcctctatttc
cactcctcattcaactgcttcgactgcggagtgatagttggcagcatctttgaggtggtg
tggggcttcttccggcctggcatgtcctttggcatcagcgtcctgagggcactgagactc
ctgaggatctttaagatcaccaagtactgggcatcactgaggaacctagtggtgtctctc
atgagttccatgaagtccatcattagtctgctctttctcctcttcctcttcattgttgtt
ttcgccctgctgggcatgcaactctttgggggcaggttcatctttgaagattacactcct
accaactttgacacgtttccagctgccatcatgacagtgttccagatcctgactggtgag
gactggaatgaggtgatgtacaatgggatccgctcacaaggaggagtgcagtacggaatg
tggtcctccatatacttcatagtgctcaccctgtttgggaactatacactgctcaatgtc
ttcttggccatcgctgtggataaccttgccaacgcacaggaactcaccaaggacgaagag
gaggaagaggagtttttcaatgcaagatacgccagaggcacagatggcccgatgtctgag
aggaggaggcggccctacctccgcaggaagaaggccatccacaggggccgtatggccgtc
cccgaggaggaggaggagagcactgctgggggcggagccgaccaaccccccaatggcacc
aatgccttctccaaccgccgtgaccgacggaggagggggggaggaggaggaagaggagga
aggtcagtgtgggagcagagggccaaccagctacgcaagcggcgccagatggagagccag
gaggtcctattcggaggcagccccaccgaggacaccactgacacccctaccaccgcctac
cgcgctcccaccctttccccagacgccagccccggtcacctgcccgagtcacccatgtcc
gggatcatacccatgcctgaacccccgatgtccatcgccatcccactaccggaaccccca
gactcggagcctgtgcctctgtttacgttagctgaggagagagcggtgaaccatcgcccc
accggtggggaaaggaggcacagggtggcccggaaatccagacctggccctgggggggcg
gaggagggagggacggcgcggcataggaggcaccgtcaccgtgaagcccgggctgaggcc
aagagcagagagtccccacatgaggaggtcagtgaatcaggcagccgcgagaggaagata
ttggaagagagggaggagaaggaggagaaagacgagaaggaggtcaaaggagagttcgct
gaggtggagggaggagtgtcaggcaaggatgaaggaggagcccttattattaacttagag
agtgaagaagagcatctgagggtgtgtattgcagacatccctgagcctcccctatgtgat
aacttccctgagtacctacccccacccctgctggaacctccaccccagatggaggagggt
gaggtgggggagactgggcagtgtgagcccttgtcccaggaccctccagtggagccagcc
ccagagcagttcgcagacccctcagagctccaggcagcagcagtggtcagtgactcagag
aacaaccaagcctccctgaaccttgaggagggtaaggagtctgagcaaggcccagacagc
cagaccagtgtgatcatagagatgtctggagcacagccactgctggaggtcacccccatg
acagctttacacagcagcaaggaggtggagatgtaccatcatgaaaggaaggagaagaag
gaggaggaggagtcgcaggtggagaaggaggaggaggaggaggaggctagcccgcccaaa
cctgtacctcctggcagcatgttcctcttcaaggcctccaacccgatcaggaggatctgt
cactatgtggtgaccatgcgctactttgagatgaccatcttgctggtgatcgtggctagc
agcatcgctctggctgctgaagaccctgtgtgcaccaactctgacagaaacagggttctc
cgttactttgattacgtctttactggagtcttcacgtttgaaatgattataaagatgact
gacctgggactgcttcttcatgatggctcctacttccgtgacctgtggaacattctggac
ttcatcgtggtggtgggagctctaatcgccttcgctctgacgaacaacaaaggcagagac
atcaaaaccatcaagtccctcagggttctgagagtcctacgacctctgaagaccatcaag
agactcccaaaactcaaggcggtgtttgactgtgtggtcacatctttgaagaacgtcttc
aacatcctcatcgtctaccagctcttcatgtttatcttcgctgtcatcgccgttcagctc
ttcaagggaaagttcttttactgcactgacagctccatggacacagagaaggagtgccaa
ggttactacattgactacgctcgagacaagaaggaagtgaagaagagggagtggaagagg
catgagttccactatgacaacgtgtgctgggctctgctcactctcttcactgtttcaact
ggagagggctggccgcaggttctgcagcactctgtggacgtgacagaggaggacatgggt
ccaagtcggggcaacaggatggagatgtccatcttttacgttgtctactttgtggtcttc
cctttcttctttgtcaacatcttcgtcgctctcatcatcattaccttccaggaacagggt
gataagatgatggaggagtgtagcttggagaagaacgagagggcatgcattgactttacc
atcagtgccaagcccctgacccgctacatgccccagaacagacagaccttccaataccga
ctgtggcactttgtggcgtcaccatcgtttgagtacacagtgatggtcatgatcgccctc
aacactgtggtgctcatgatgaagtactactcagctccagcagcgtatgacacggtactg
aagcacctgaacacagccttcaccgttctcttctccctggagtgtatcctcaagatcatg
gcctttggttttgtgaactattttcgagacacttggaacatttttgacttcatcactgtg
ctcggcagcatcactgagatcattgtggatttacagtcaataaacacattcaatatgagt
ttcctgaagctgttccgggctgccagactgatcaaactgttgaggcagggctacaccata
cgaatcctgctctggacctttgtacaatccttcaaggctcttccttatgtttgtctgctc
atcgccatgctgttcttcatctatgccatcattgggatgcaggtgtttggaaacatcaaa
ttgaacgatgaaaaccatatcaaccagcacaacaacttcaagaccttctccggtgcactg
atgcttctcttcaggagtgcgacgggggagtcatggcaggagatcatgctatcgtgtctg
ggggggcaggagtgtgagccagactcctccatggcacccatgaccatgtcccctgaccac
gagggaggctgtggtactgactttgcctactgctactttgtctccttcatcttcttcagc
tctttcctgatgctgaatctgtttgtggctgtgatcatggataactttgagtatctgacc
agagactcttccatcctgggtcctcatcacctggatgagtttgtccgtgtctggggagag
tacgaccgtgcagcatgtgggcgtatacattacactgccatgtatgagatgttgacccac
atgtctccacccctgggcctggggaagaaatgccccagaggtatggcctacaagaggctg
gtgttgatgaacatgccagtggatgaggacatgtcagtccacttcacctccaccttgatg
tctctcatccgcactgctctggagatcaagatcgcacgaggtcagggaatgagtggggag
gaccgagtagctctggacactgagctacagaaggagatcagtgtgatatggccgtacctc
ccccagaagaccctggatgtactggtgcccatcaacaaagattctgacatgacagtaggt
aagatatatgcctccatgatgatcatggactacttcaaacagaacaaagccaagaagctg
agagcacagctggaagcacagaaggccagtctgatgccgttccagcggctggatgcctcg
accctctctgaagacattctgtccaatgctcagcccctgccctgcatgccccacagtgct
ggctccgccctgaccagaggaggcctggtggcattgagtcctctctccccccaggacctg
ctcaacatgcagccccagacctctgacacggacaccagaagccaacactccaggaccgag
atggccagtggctctatgaagcggtcctcgtccgctgtggctgaccagagggtgaatggc
ctgaggcaggaggagaagaagagtcctgatagactgtacagaccacgccacaagagctac
aaggctgctgtgtcgcggtcagaaaggaagaggcagttggatacggagaaggagcgcggg
aggtctaaagagcgccgccacctcctctccccagacacgtcccgctgtacctccgaggag
aggagcctgcaaccctcacgctcccctagccgtgagcgcacacaccccctggacaaacag
ggcaacagctccgacagccccctccccacctctgaatctagtacccctagccgccgccct
ctgtcccagacctcaacacgctcccatccccacatctcctactctcctctggtgtgtcgc
acgcaccctccctcaggggacgatgatgacgacaggggcagcccagagactcagaggaga
ggggaagcctccagagaccgggcagggggagagggacagagtggggcgaggggccgtcgc
caccagcagggctctcccctgcgtcgctacccgtcggagccctacctggccctgcaggag
gacgagcacagtctggaccccaccgggttcatggagacgctgactttcgaggcggcggta
gccaccagcctgggacgtgctaacacggtcagctccacatccagctccagcttcagctcc
gctcgacggggttccaggagcagctggcaggtccccaatggacacttccggaaacgcctg
gctcagacggtctctgttgcgggctgtgagccactcagcgacacagaagaggacgatcgt
tgctag
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integrated database retrieval system
