Oncorhynchus keta (chum salmon): 118402014
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Entry
118402014 CDS
T09424
Name
(RefSeq) cadherin-4-like
KO
K07597
desmoglein 2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04382
Cornified envelope formation
oke04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118402014
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118402014
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118402014
Cell adhesion molecules [BR:
oke04515
]
Cadherins
Major cadherins
118402014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
118402014
NCBI-ProteinID:
XP_035655697
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Position
23:complement(22729924..22753364)
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AA seq
1180 aa
AA seq
DB search
MARVATATVLLLPFILTFLCVVAAEGGGLKLRRQKREWIIPPQRLKENVDYTSQEYIAKI
RSDEQYTSKVTYSLTGIGADQNPRSLFTVNPNTGLVRINGILDREKIPSYHLLGVATYNN
GSRAEKDIDLRISVEDQNDCQPVFVFGQSGSVNESSAAETVVMKVLATDADEVNTLHSQI
YYSIVQKSSSDSMFAINYQTGEIMVRQTTLDRETQDTYTLTVKGSDMNGAMGGNSGTGQV
VIKILDINDNIPTLEKEYYEGSVLENTVNVEVLRIKATDLDLMYTENWLAVFTIITGNEA
GYFTITTDSKTNEGIIMITKALDYEELKVLNLAISVSNKAVYYFGSSSTSGGIGGGGVAG
RGMTGGGMTGGGKTYPIKINVINQKEGPKFQPMVKVVTISEDSTTVTINKVITTYAAIDS
DTLLTAKNVRYAKQSDVDNWLIIDEKTAEIKLNKVPDRESKYLVNGTYYAKIIAITTDLP
SKTATGTIAIQVEDFNDHCPILTATATTMCLGDTTVYVKAVDGDTFPNGAPFNFRVIQGD
SKQKWTVEHLNATTAILRDHAHMWPGHYKVAVEISDQQGKACADIQILNVDVCTCDQVNK
VCFAREMGKDVTLGASAILLLLLGLLLLLLVPLLLLFCLCGGVASIGDFKAMPFDTKEHL
IPYHTEGQGEDKEIPLLQIPVAIDGSIKVVDLENNVVGMGLIRDAGAAGGSAGGVFGDGF
TQSAISTWEHNHSHGSHQPSGRVKVSYGVGGGTMTGHEHFSRYGAGAYDGIALSEGDLEE
YYSAKANHAAQNDQQRDDLLIYDYEGQGSPVGSVGCCSLLGADDDLDFLNDLGPKFNTLA
KICQGSIAMEAETVNMSVSSPRPRPTTSTHTEVNRDTALNVNTLNTSSSTSSTPLQENLV
TRAQGSATIHKVQENKVMPNKTLFIQQPPMYYAAAPTMYMVEPQPQLVLVEQRGGGGYVR
AQQAVSQVGVGMGQGVVQVGGLHGSQGMILLERQVGAGGSGEGQGHVVMGASQVLQGAGH
TILGGGHIITETSQTITRGGQFLQGADQTMVGKGHLSPGGNFSQGSLSGSRKVLVVESGS
GSASAAECSAGLGAAQVTMLQRGQGLEVKCHSVEMRGQGDASSLSSSSLCGTAGSNEASA
TAVKVTTTPTSAHCSSSHTAVVQEKKISVTEKYVETSTIA
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtgtagccacagccactgttttattattgccgttcatactaacgtttttatgt
gtggtggcagcagaaggcggtgggctgaagctgagaagacagaagagagaatggatcatt
cctcctcagaggttgaaggagaatgtagattacaccagccaagagtacatcgcaaagatt
cgctctgatgagcagtacacgtcaaaggtgacttactcactgactgggatcggtgcagac
caaaaccccaggagcctattcactgtcaacccaaatacaggcctggtcagaatcaatgga
attctggacagagagaagataccttcctaccacttacttggagtagcgacatacaacaat
ggaagcagagcagagaaggacattgacctgcgtatttccgttgaggaccagaatgactgc
caaccagtgttcgtctttggccaatctggatctgttaatgaatccagtgctgcagaaacc
gttgtcatgaaagttttagccacagatgcagatgaagtgaacacgctacactctcagatt
tactatagcatagtgcagaagagttcttcagatagcatgttcgccatcaactaccagact
ggagagatcatggttcgccagactacgctggacagagagacccaagacacctacaccctg
actgtaaaaggctcagacatgaacggagcaatgggtggaaactcaggaacaggacaggtg
gtgattaaaatcctggacatcaacgacaacatccccaccctcgagaaagaatattacgag
gggagtgtgttggagaacacagtcaatgtggaggtgctgaggatcaaagccactgatctg
gacctgatgtacactgagaactggctggctgtgttcaccatcatcacaggcaacgaagcc
ggctacttcactatcactaccgactccaagaccaacgaaggcattattatgataaccaag
gcactggactatgaggagctgaaagtgctcaaccttgcaataagtgtttccaacaaagca
gtgtactactttggctcctcttctacgagtggagggataggaggaggaggggttgcaggc
aggggtatgacgggcggtggtatgacgggcggtggtaagacctaccccatcaagataaat
gtgatcaaccagaaagagggccccaaattccagccaatggttaaagtggtgaccatctct
gaggactccaccacagtcaccattaacaaggtcatcacgacctacgcagccatcgacagt
gacacactactgactgctaaaaatgttaggtatgccaaacaatctgatgtagacaactgg
ctgatcattgatgaaaagacagcagagatcaagctgaacaaagtgcctgatcgggagtcc
aaatacctggtcaatggaacatactacgccaagataatagccatcacaaccgatctgcca
tccaaaacggccacagggacaatagctatccaggtggaggactttaacgaccactgtccc
atactgacagctacggctacgaccatgtgtctgggggacaccactgtgtatgtcaaggct
gtggatggggacaccttccccaacggagctcccttcaacttcagagtgattcagggggac
agcaaacagaagtggacagtggagcacctcaatgctaccactgccattttacgagaccat
gcccacatgtggccaggtcactacaaggttgctgtggagatcagtgaccagcaggggaag
gcctgtgctgacatccagattctgaacgtggatgtgtgcacctgtgatcaggtcaataag
gtctgcttcgcccgggagatgggtaaggacgtcacattaggagcatctgccatcctgctg
ctccttctgggcctcctgctgttgctgctggtgcccctcttgctgctgttctgtctgtgt
ggaggagtggcatccataggtgactttaaggccatgccatttgacactaaagaacacctg
attccatatcacaccgagggacaaggagaagacaaggaaattccactcctgcaaattcct
gtggcgatagatggctccatcaaagttgttgacttggaaaacaacgtggtgggaatggga
ttaataagagatgcaggggctgcaggaggatcagcaggaggagtgttcggggacggcttc
acccagtccgcaataagtacatgggagcacaaccattcccatggctcacaccagcccagc
ggaagagtgaaggtgagctacggcgtgggtggaggaaccatgactggacatgaacacttc
tccagatatggagctggagcttatgacgggatcgctctctccgagggagacctagaggag
tactactctgcaaaggccaatcatgctgcgcagaacgaccaacagagagatgacctactg
atctacgactacgaaggtcaggggtcaccggtaggatctgttggctgctgcagcctcctg
ggggccgatgacgacctggacttcctcaacgacctggggcccaagttcaacaccctggcc
aagatctgccaggggtcaatagctatggaggcggagactgtcaacatgtctgtgtcatcc
cctagacctaggcctaccacatccacccacacagaggtcaatagagacacagctctcaat
gtcaataccctgaacacctcatcctccacctcctccacacccctacaggagaacctggtt
actcgggcccaaggatcagccaccatccacaaggttcaggagaacaaggtgatgcccaac
aagaccctcttcatccagcagccccctatgtactacgctgctgcccccaccatgtacatg
gtggagccccagccccagttggtgctggtggagcagagagggggaggtggttatgtccgt
gcccagcaggcggtaagccaggtgggggtagggatgggtcagggggtggtgcaggtagga
gggctccatggttctcagggcatgattttactggagaggcaggtaggagcaggtggtagt
ggggaaggacaaggtcatgttgttatgggggcaagccaggtcttacagggagcgggccac
actattttggggggaggtcacattattacagagacgagccaaaccattacacggggaggc
cagtttctacagggggcagaccagaccatggtcggaaaaggccatctatcgccaggagga
aacttctcacagggaagcctgtccgggtccaggaaagtgctggttgttgagagcgggtct
gggtcagcctcggcagcagagtgcagcgcaggcttgggggctgcccaggtcaccatgctg
cagagaggccaggggttagaggtcaaatgtcatagtgtagaaatgagaggtcagggtgat
gcttcctcgttgagctccagctccctgtgtggcacggcagggtcaaacgaggcctctgct
actgctgtcaaagtcaccaccacgcccacatctgcacattgtagcagcagccacacagct
gtggtgcaagagaagaaaatatctgtcactgagaaatacgttgagaccagtactatagcg
tag
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