Oncorhynchus keta (chum salmon): 118402113
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Entry
118402113 CDS
T09424
Name
(RefSeq) tenascin-N-like isoform X1
KO
K06252
tenascin
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04510
Focal adhesion
oke04512
ECM-receptor interaction
oke04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118402113
04518 Integrin signaling
118402113
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118402113
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oke00536
]
118402113
Glycosaminoglycan binding proteins [BR:
oke00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118402113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
Fn3_Dep-1_3rd
EGF_Teneurin
FN3_DSCAM-DSCAML_C
EGF_Tenascin
Pur_ac_phosph_N
EGF_2
Interfer-bind
DUF7949
hEGF
Motif
Other DBs
NCBI-GeneID:
118402113
NCBI-ProteinID:
XP_035655917
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All DBs
Position
23:28317303..28345722
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AA seq
1032 aa
AA seq
DB search
MTTRLHWLTRALCLISILCTVTSKYVTEDYSSPAEKEVTFSHVYKIDLAKSPECKLALQT
LPSQQDQFSGLQELEGGASLDGENNIVFRHQINLKSPKCDCDESESFTSLLYRVNGLEEE
VEHLKSQCSQGCCGGKGGGAGGVDTSCSGHGTYQHNTCSCQCNPSWEGPDCSISTCPDEC
NDNGRCVDGKCVCHAGYTGSDCSQLMCPGDCNDKGHCVDGKCVCFSHFTGEDCSEQKCDP
DCIHGTCVNGMCICDEGFFGEDCSTVSGPNGLRLVRVTDNSLLVEWEAVKAAEYYILTWH
PEGNEAELERFTVPNTETSYLITGLSPGVTYIVQVYAVIKEIQSEGDRIEATTEVSGIDV
IRVLGQTEDSIQVDWQNPAAPLDHFRLTYANPDGQEDEQNVPMSAEARTTHTIVGLQPGT
EYLITVQGIKGTIEGKASFATGVTDLDDPTNLLTEEVTEDTATVEWQKVQAEIDGYVISY
SSAEGSSGEIPVGADSTSYRLTGLRPGVIYTVYIWAVKGSRVSRKSSTEAETELDVPTNL
LTREVTEDTATVTWDKVQAEIDGYLISYSSAEGSSGEIPVGADSTSYRLTGLRPGVIYTV
YIWAVKGSRVSRKSFVDAETDLDAPTNLFTREVTEDTADVSWDRPLADIDGYLISYSSAE
GSSGEIPVGADSTSYRLTGLRPGVIYTVYIWAVKGSRVSRKSSTEAETEIDAPKKLKASD
VKLNVATLTWTAPLARIDGYILTLRAEDGSLKAVEKKLRAGESSFAMSDLEKGNNYIVTL
LAYRGPKRSRVIEITFKTVGLLYPFPMDCTQIKKNGNVASGIYTIYVNSDRTKPMEVYCD
MDTDGGGWVVFQRRNNGQMDFMKRWRQYMAGFGNMTDEFWLGLDNIYELTNTPTQYELRV
DLGVGSEKAYAVYDNFKIAPAKQKFKLTIGEYSGTAGDAMSYHQGRPFSTVDNDNDIALG
NCALTHRGAWWYKNCHLANLNGKFGDNRHSMGVNWEPWKGHLMSLDFTEMKIRPVGTARK
RRSLRSSTAPRK
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgaccactagacttcactggctcacaagagccctatgcctgataagcatactgtgcact
gtcacttccaagtatgtgacagaagattattcatcccccgctgagaaagaagtcaccttc
agccacgtctataagattgacctggccaagagccctgagtgtaaactcgccttgcagacc
ctcccttctcaacaggaccagttttcaggcctgcaagagctggaagggggtgcttctctg
gacggggaaaacaacatcgttttcaggcaccaaatcaacctcaagtccccaaagtgtgac
tgtgatgagtcggagagctttacttctctgctgtacagagtcaacgggctggaggaggag
gtggaacatctgaagagtcagtgctcccagggctgctgtggtggaaaaggtggtggagca
ggaggtgtggacactagctgtagtggccacgggacctaccagcacaacacctgcagttgt
caatgcaaccctagctgggagggtcctgactgctccatttccacctgtcctgatgagtgc
aacgacaacggccgctgtgtggatggcaagtgtgtctgccacgctggctatacggggagt
gactgcagccagctgatgtgcccaggcgactgcaacgataagggacactgcgtggacggc
aagtgtgtttgcttcagccacttcactggcgaggactgcagcgaacagaaatgcgatcct
gactgcatccacggcacctgcgtgaacggaatgtgtatctgtgacgaaggcttctttggg
gaagactgctctacagtgtcgggccctaacggcctgcgtctggtaagggtgactgataat
tctctgctggtggaatgggaggctgtgaaagcagcagagtactacatccttacctggcac
cctgagggcaatgaggcagagctggagcggttcaccgtgcccaacacagagacctcctac
ctgatcacaggactcagcccaggtgtcacctacatagtgcaggtgtacgctgtcatcaag
gagatccagagcgagggggacaggatcgaggcgaccacagaggtgtctggtattgatgtt
atccgggtattgggccagactgaggactctatccaggtggactggcagaaccctgcagca
cctctggaccacttcagactgacctatgctaaccctgacgggcaggaggacgagcagaac
gtaccaatgagtgcagaggccaggaccacccacaccatcgtaggactgcaacctggcacc
gagtacctcatcacagtgcaaggcatcaaagggaccatcgaagggaaagcctccttcgcc
accggggtcacagatcttgacgatcctactaacctcttgaccgaagaagtgacagaggat
accgctaccgtggaatggcagaaggtacaagcagagatcgacggctacgtgatcagctac
agctctgctgagggctccagtggggagatccctgttggggcagacagcacctcctacagg
ctgactgggctgaggcctggagtcatctacacagtctacatctgggctgtcaagggctcc
cgggtcagcaggaaaagctccacagaagctgagacagaactagatgttcctactaacctg
ttgaccagagaagtgacagaagacacagcgacagtaacatgggataaagtccaggctgaa
attgacggctacctgatcagctacagctctgctgagggctccagtggggagatccctgtt
ggggcagacagcacctcctacaggctgactgggctgaggcctggagtcatctacacagtc
tacatctgggctgtcaagggctcccgggtcagcaggaagagcttcgttgacgctgagaca
gatctggatgctcctactaacctctttaccagagaagtgacagaggacacagctgatgtg
tcgtgggacagacctttagcggacattgatggctacctgatcagctacagctctgctgag
ggctccagtggggagatccctgttggggcagacagcacctcctacaggctgactgggctg
agacctggagtcatctacacagtctacatctgggctgtcaagggctcccgggtcagcagg
aagagctccacagaagctgagacagaaattgacgcaccaaaaaaactgaaagcatcggat
gttaaactgaatgtagctaccctgacctggactgctcccttagccagaatcgatggctac
atcctcacattgagagctgaggatggcagtttgaaggctgtggagaagaagctgagggca
ggagagagcagctttgccatgtcggacctggagaaaggaaataactacattgttaccctc
cttgcttacagaggaccaaagaggagcagagtgatagagatcacattcaaaacagtgggt
ttgttgtacccattccccatggactgtactcagattaagaagaatggtaacgtggcaagt
ggaatctacaccatttacgtcaacagtgatcgcaccaagcccatggaggtgtactgtgac
atggacactgatggcggtggatgggtggtgttccagagacgcaacaatggacagatggac
ttcatgaagcgctggagacagtacatggctggttttgggaacatgactgatgaattttgg
cttggtctggacaatatctatgagctgaccaatactcccacgcagtacgagctgcgagtg
gaccttggtgtgggttcggagaaggcctatgctgtctatgacaacttcaaaatagccccg
gctaagcagaagttcaagctgaccatcggtgaatacagtggaacagcaggcgatgccatg
agctaccatcaaggtcgccccttctccacggttgacaatgacaatgacattgctcttggt
aactgtgccctgacacatcgtggtgcatggtggtacaaaaactgtcaccttgccaacctc
aacggcaaattcggagacaacagacacagcatgggtgtgaactgggagccatggaagggt
cacctgatgtctcttgatttcactgagatgaagattcggcctgtgggcactgccaggaag
aggaggtcgcttagaagcagtacagctcccaggaaatag
DBGET
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