Oncorhynchus keta (chum salmon): 118402150
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Entry
118402150 CDS
T09424
Name
(RefSeq) nucleolysin TIAR-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118402150
03041 Spliceosome [BR:
oke03041
]
118402150
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
118402150
Spliceosome [BR:
oke03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118402150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
PHM7_cyt
RRM_Nup35
Nup35_RRM_2
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
118402150
NCBI-ProteinID:
XP_035656000
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Position
2:50113355..50136077
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AA seq
408 aa
AA seq
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MEDECHPKTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEQPDSRRMNSSVGFSVLQQ
SSNDPYCFVEFFEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDL
SPEITTEDIKAAFAPFGKISDARVVKDMTTAKSKGYGFVSFYNKLDAENAIVHMGGQWLG
GRQIRTNWATRKPPAPKNVQDNGSKQLRFEDVVNQSSPQNCTVYCGGIQSGLSEHLMRQT
FSPFGQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTSIECHIVKCYWGKESPDIAKS
VPQMEYGQGQWGQWSQMYGSPQAQQYGQQYMANGWQVPSYGVSYGQSWNQQGFGVEDSIL
AAAAQNLSRQSQSPAWVGGFGSPAPSQPQTGPVMPNQGNFNMAGYQTQ
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgaatgccaccccaaaaccctgtatgttggtaacctgtccagagatgtaaca
gaaattttgattcttcagctgttcacccaaattggaccttgcaaaagttgtaaaatgata
actgagcaacccgatagcaggaggatgaactcttctgtcggattttctgttttgcagcaa
tcaagcaatgacccgtattgctttgtggagttctttgaacatagagatgctgctgctgcc
ctagcagccatgaacgggaggaagatattgggaaaggaggtcaaagtaaattgggcaacc
actccaagtagccagaagaaagacacatctaatcacttccatgtatttgttggagacctg
agccctgagatcaccacggaggatatcaaagctgcatttgcaccttttgggaaaatctcg
gatgctcgtgttgtgaaggacatgactacagcgaaatctaaggggtatggatttgtgtcc
ttctataacaaactggatgcagagaatgccattgtgcacatggggggacagtggttaggg
ggacgccagataaggaccaactgggcaactcgcaagccacccgccccaaagaatgtgcaa
gacaatggctcgaagcagctgaggtttgaagatgtagtgaaccaatccagtccccagaac
tgcaccgtgtactgtggaggaatccagtccggactatcagagcatctcatgcgacagaca
ttttcaccctttggacaaatcatggaaataagagttttcccagagaaaggttactctttc
atcaggttttcctcccatgaaagtgctgcccatgcaattgtttctgtaaatggaacatcc
atcgaatgccacatagtgaagtgctactggggcaaagaatcccccgacattgccaaaagc
gtaccacagatggagtatggtcagggtcagtggggacaatggagccaaatgtatggaagc
ccccaggcccagcagtatggacaacagtacatggcaaatggttggcaagtgccctcttat
ggagtgtcttatggacagtcttggaatcagcaaggatttggtgtagaggactccattctg
gctgcagcagcacagaacctttcaagacagtcccagtccccagcctgggttggagggttt
ggatccccggcaccgtcccagccccagaccggtcctgtgatgcccaaccagggaaacttc
aacatggctggctaccagacacagtga
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