Oncorhynchus keta (chum salmon): 118402172
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Entry
118402172 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: partitioning defective 3 homolog
KO
K04237
partitioning defective protein 3
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04144
Endocytosis
oke04517
IgSF CAM signaling
oke04520
Adherens junction
oke04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118402172
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118402172
09144 Cellular community - eukaryotes
04520 Adherens junction
118402172
04530 Tight junction
118402172
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oke01009
]
118402172
Protein phosphatases and associated proteins [BR:
oke01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118402172
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Paralog
GFIT
Motif
Pfam:
Par3_HAL_N_term
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
118402172
NCBI-ProteinID:
XP_035656060
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All DBs
Position
23:31690621..31948388
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AA seq
1381 aa
AA seq
DB search
MKVTVCFGRTRVVVPCGDGNIKVHTLIQQAVMRYKKAIAKDASYWLQVHRLEHGDGGILD
LDDLLSDVADDKDRLVAVYDEQDPHHGGDGTSASSTGTQSPDLFATELNSSNMSAFQPYQ
AASEIEVTPSALRSNMPLHVRRSSDPALATINGPFSDPRVTLPPEKPSRKNPTRWSTTAG
FLKPRRSVGGTGTGTNSLERKGNGPDTYRSXPRDAGTCANQREFQRETARSSLSANHPMV
DRWLERREQDEEEENSRIEPIGRADSCMDHTPLRSLDDIVKLVEVSNDGGPLGIHVVPFS
ARDRRTLGLLVKRLERGGKAQEQGLFQENDCIVRINNGDLRNIHFEQAQNMFRQAMRSPV
IMFHVVPNLMKAQYEQLSHSERNPNVAYSSGRFSPDSLASERGSTTCLDHRLDHTPQSRG
PHPQPHPEQGDAYTPLPHPHGGSMGKPPSGHAPSPHRVLNSTPTAGFTKKVGRRLNIQLK
KGPEGLGFSITSRDVPIGGSAPIYVKNILPRGAAIQDGRLKAGDRLLEVNGVDLVGRTQE
EVVALLRATPMGGAVGLVVLRQEETFLNAEPQMQSPRDLVEEDDLVLTPDGTREFLTFEI
PLSDSGSAGLGVSVKGNRSKENHADLGIFVKSIINGGAACKDRRLRVNDQLIAVNGESLI
GKTNQEAMETLRKSMSVEGNKRGTIQLIVARRVTKRSELEAPGSPLGPEQTLLNCSLLDD
RERRISHSLYGGIEGLDDNLMPQQALMGRMMGNYQLSPTVNMPQDDTVIIEDDRPPVLPA
HLSDQSSSSSHDDMGFHVEVPPTWAKDTPIQNESPLSPDDTDPDGAFQREGFGRQSMSEK
RTKQFGDASQLEIIKTRKSKSMDLVADEINLTPRKENTPGSSTRDVGPSLGLKKSSSLES
LQTAVAEVTLNGDMPFHRPRPRIIRGRGCNESFRAAIDKSYDRPAATEEDDEGMETLEED
TEESSRSGRDSVSTVADLTPLPNTERPLANGNRANEDKKKDKGGKDKKKPDRDKEKDSKN
RAKKGMLKGLGDMFRFGKHRKDGEKLERKGRLEELQASEEETLRMKLEQERIQAKTRELR
ERQARERDYAEILDVNLSRDEEHPYAGIGPLDTSLDSGHSRPQSPRDNHHQDSSLYTQVG
KTRNANGRPPSADSNRLAPSNHDRIQRLRHEFQQAKGDDDPDDRRRTYSFEQPWPNNTNT
GPSPYQTDGQQTGRHSVSVEVQRQRQRQEERDAFQQAQRQYSSLPRQPRKNPSSISQDSW
DKVYPPGDGFQTAKENPRYSSYKGSRNGYPGMSGVNARVLLEAQELLRQEQRRREQEAKG
KQLLLAPPQEHPGNNTYDGYSAHKDPVSPKGPYRQDVPPSPSQLARLNKLQGPEKGRPFY
S
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgacggtgtgttttggaaggactagggtggtggtaccgtgcggagatggaaat
atcaaagtccatactctcatccagcaagccgtcatgagatacaaaaaagccattgcaaag
gatgccagctactggttacaggttcaccggttggagcatggggacggaggtattctagac
ctggatgacttgctgtctgatgtggctgatgacaaagaccggctggtggctgtgtatgat
gaacaggaccctcaccatggaggcgacggcaccagcgcaagctccacgggaacccagagc
cccgacctgttcgccacagagctcaactccagcaacatgtccgctttccagccctaccag
gccgccagcgagatagaggtcactccgtccgcccttcgatccaatatgcccctccatgtg
cgtcgcagcagtgacccggccctggcgacgatcaacgggccgttcagcgacccccgcgtg
accctgccgccagagaaaccgtccaggaagaaccccacccgctggtccaccacggctggc
ttcctcaaaccacggcgctctgtaggaggcactggcactggcaccaatagcctggagaga
aagggtaatggtccggacacgtaccgtagtnctccccgggatgcaggcacgtgtgccaac
cagagagagttccagagagagacggcccgctcctccttgagcgccaaccaccccatggta
gaccgctggctggagagacgggagcaggatgaggaggaggagaatagcaggatcgagccg
attggccgagctgattcctgtatggaccacacccctctgaggtccctagatgacattgta
aagctggtagaagtctccaatgatggcgggcccttggggatccatgtagtacctttcagt
gcccgggaccgcaggactctaggcctgttggtcaagcgcctggagaggggaggcaaggcg
caggagcagggtctgttccaggagaacgactgcatcgtacgcattaataatggagacctg
cggaacatccattttgaacaagcccagaacatgttccgccaggccatgcgttccccggtc
atcatgttccacgtggttcccaacctgatgaaggcccagtacgagcagctgtcacacagc
gagaggaaccccaacgtggcctactcctctggacgcttcagccccgactctctagctagc
gagagaggcagcaccacctgcctggaccaccgcctggaccacaccccacagtcccgtggt
ccccatccccaacctcacccggagcagggagacgcctacacccctctaccccacccccat
gggggctccatgggcaagcccccatccggacacgccccctcccctcacagggtgctaaac
tcgacccccacggcgggcttcaccaaaaaggttggcaggagactcaacatccagctcaag
aaaggtccagagggtctgggtttcagcatcacttcgcgcgacgtccccatcggcggctcg
gcgcccatctacgtgaagaacatcctgccccgaggagctgccatccaggacggacgcctc
aaggccggagacaggctgctggaggtgaatggagtggacttggttggtcggacccaggag
gaagtggtcgctctgctgagggccacgcctatgggaggagctgtggggctggtggtgcta
cgacaggaggagaccttcctgaatgcagagcctcagatgcaaagccccagagatttggtt
gaggaggatgacctggtgttgacccctgacggtaccagggagttcctgacctttgagatc
cctctgagtgactcggggtcggccggtttaggggtcagcgtcaagggcaaccgctccaag
gagaaccatgctgacctaggcatctttgtcaagtccataatcaatggaggagctgcctgc
aaggatagacggctgcgggtcaacgaccagctgatagcggtgaacggcgagtcattgata
ggcaagaccaatcaggaggccatggagacgctaaggaagtccatgtcggtggagggcaac
aaacgcgggacgattcagctgatagtggccaggagggtcaccaaacgcagtgagctggag
gcccctgggagccccctgggaccggagcagaccctcctgaactgctccctgctggacgac
agggagcgtcgtatctcccactccctgtacggaggcattgagggcctggacgacaacctg
atgccacagcaggctctgatgggcaggatgatgggtaactaccagctctccccaacggtc
aacatgccccaggacgacactgtcatcatcgaagacgatcggccacctgtacttcctgcc
cacctctctgaccaatcgtcttccagttcccatgacgacatggggttccatgtggaggtc
cctccaacttgggccaaagatactccaattcagaatgagagccctctgagccctgatgac
accgacccagacggagcctttcagagggagggtttcggcagacagagcatgtcagagaaa
cggacaaagcagtttggagatgccagtcagctggagatcatcaagacacgcaagtccaag
agcatggatctagtagccgacgagattaacctcacccctcgcaaagagaacacaccaggg
tcttccaccagggacgtgggtccctcccttggcctcaagaagtccagctctctggagagt
ttacagaccgccgttgccgaggtgacgctcaacggtgacatgcccttccacaggccacgc
ccacgcataatcagggggcggggctgtaacgagagcttccgggccgctattgacaagtct
tacgacaggccagcagccaccgaggaggacgacgagggcatggagacattggaggaggac
accgaggagagctctcggtccgggcgcgactctgtgtccactgtggcagacctgacccca
ctgcccaacacagagagaccgctggccaacggcaaccgcgccaatgaagacaagaagaag
gacaaaggagggaaagacaaaaagaagccagaccgggacaaagagaaggacagcaagaac
agggctaagaaaggcatgctgaaaggactgggcgacatgttcaggtttggaaaacaccgc
aaggacggagagaaactagagcgcaaagggaggctggaggagctgcaagcctcagaagaa
gagacactgaggatgaaactagaacaggagaggatccaggctaagacccgggagctgcgg
gagcgccaggcacgggagagggactacgctgagatcctagatgtcaacctgagccgagac
gaggagcacccctacgcaggcatcgggcccctggacacgtccctggacagcgggcacagc
cggccccagagcccccgagacaaccaccatcaagattcctccctgtacacacaagtcggc
aaaacccgcaatgcaaatggacgccctccctccgccgacagcaacagactagcgcctagc
aaccacgaccggatacagcggctgagacacgagttccagcaggccaagggagacgacgac
cctgacgaccggagacgcacctacagcttcgagcagccctggcccaacaacaccaacaca
ggcccaagcccgtaccagacagacggacaacagacaggccgacactctgtgtctgtagag
gtgcagagacagagacagaggcaggaggagagagacgccttccaacaggcgcagagacag
tacagctccctgccacggcaacccaggaagaaccccagctccatctcgcaggactcctgg
gacaaggtctacccgccgggtgatggcttccagacggccaaggagaaccctcgctactct
agctacaagggctccagaaacggctacccggggatgagcggtgtgaatgcccgcgtcctc
ctggaggcccaggagctgctgaggcaggagcagagacgcagggagcaggaggccaaaggg
aagcagctactgctagcgcccccgcaggaacaccccgggaacaacacctatgacgggtac
tcggctcacaaggaccctgtgtcgcctaagggcccctatagacaggacgtacccccctcg
ccctcccagctggccaggctcaacaagctgcaggggcccgagaagggaaggcccttctac
tcctga
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