Oncorhynchus keta (chum salmon): 118402193
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Entry
118402193 CDS
T09424
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 1-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118402193
03012 Translation factors [BR:
oke03012
]
118402193
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
118402193
mRNA cycle factors
Stress granule specific factors
118402193
Translation factors [BR:
oke03012
]
Eukaryotic type
Initiation factors
eIF-4
118402193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
eIF4G1-like_eIF4E-bd
Motif
Other DBs
NCBI-GeneID:
118402193
NCBI-ProteinID:
XP_052333017
LinkDB
All DBs
Position
23:complement(33948898..33978097)
Genome browser
AA seq
1762 aa
AA seq
DB search
MNKPPQPITGPTSVPHPSPSPGLTQAAYAPGQPPSLVFATPPPQQMNSSPQPRQFAAGPR
ALHQQGGYRALQPYYANRATMSTSAPRVQTSSGPRPVGPTHVYQPSSQMMMIPGQQLSFA
GSPQGYFIPPGQYRAPYMPPSPQYPVTSGTAGFYPGTSPAEYPTYAGAYYPAQPQYSHTP
PVQTAPVMISPAQPQQQALPPQPPPSQPLAPKRERKAIRIRDPNQGGRDITEEIMSGGRA
TSTPPSQSSTTEGEGPSQTNGEVTKPVTMMTRTDDNMEPAETMAAMTPPPVLVTPEPATA
TVSTEAKQEKDSQAAPPTEQVVSQSAVPTAAGKAEEAIPPEEDQAPPPSPSPPAAPTSPP
PAEVQTPPPITTIAQVSDTVDAGVTLAGKAVTPEAPPIEEEPSAALAAVEKPPALVAEKE
EAENKKEEVVVVVVEEEIVEKVKEEPVLTTKPEVVAPVTVVVAKEHTKPAPRPLTPVATA
TIKHSAPAVKPVVSVEALTKTESVVEPTAPKQEAAVPVSAPVPAVTPSVLEAEPAMAQKS
EAQTPLSNGLPQEYPDEVDAPVPAQERTAMPNTEPAVPTPQETATLADAAVAEEGEKEED
AATVPLASSPSEDTSMQAAVSVPKKKRNMKELNKKEAIGDMLDAFKEEKEAAAAPEPLST
LAGPSPVAPPPLVTADAPDETWEEKEDKQNADTPPLKPGDLKYQYKGEQWKPIDPEDKKR
YDREFLLGFRYIGASMNKPEGLPLICDVVLDKANKTPMRPAEPGRNMMNAGPDFTPAFMG
NLGRQSSGGGGGGPRGPGRDHMGPPGPRRSQQGQRKEPRKIIISSSLGGDVELNKAEKAW
KPAVKMAGSRGAAPEEEESDDPEQAKTQELFKRVRSILNKLTPQMFQQLMKQVTELTIDT
EERLKGVIDLIFEKAISEPNFSVAYANMCRCLMGLKVPTTDKPGVTVNFRKLLLNRCQKE
FEKDQDDDVIFEAKQKEMEAAKEEEKAGLKAELEEAKDKARRRSLGNIKFIGELFKLKML
TEAIMHDCIVKLLKNHDEESLECLCRLLSTIGKDLDFEKAKPRMDQYFAQMDKIIKEKKT
SSRIRFMLQDVIDLRRSGWVPRRGEQGPKTIDQIHKDAEREEQMQLVKVQQQLMSRNDSG
GGGGGGGGRGGGGGGGGRDGRGGDRDRGGRDQGGRGGQHGGQGARGSQPQDEGWNTVPIS
TKNRPIDTSRLSKITKPGALDFNNQLLAPQLGGKGMWGSWGKGSSGGTTGAKPAAGAEPA
AETGRPATGNRFSALQQSAPPASSSDADRRVPQRSSSSRDRGGDRDRFDRFERRDSSRDA
RPPITKRSFSRETEERRSDSRTPTEPPVRRVASMSDDRNRGSRDRGGSGSRDRAPSKEAV
VKRETGPTLPPAAPAKPAMTEEELDKKSSAIIEEYLHLNDMKEALQCVGELNSAPLLFVF
VRNGLEDTLERSAIARERMGLLLHQLLKAGTLPTTQYYKGLKEILEVAEDMAIDIPHIWQ
YLAELITPMLHDGGIPMGQLFREISKPLVPLGKAGLLLVQILNLLCKGMTHKKVGGLWTE
AGLNWRDFLPEDEDVNKFVTEQKIEFTLGEESDETNQKKPMSGEELSKHLDRLIQDRANN
QRIRDWVEANLDEQQAAANQFVRALMTSICQSAVICENPYKVDVEQITQRAKLLQRYLSD
EHRELQALYALQALMVHMEQPANLLRMFFDALYDEDVIKEEAFYRWESSKDPAEQTGKGV
ALKSVTAFFTWLREAEEESDKD
NT seq
5289 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaccaccgcagcctataacgggacccacctctgtcccacacccctccccctcc
cctggactgacacaggctgcctatgccccaggtcagcccccttctctcgtcttcgccacc
ccaccacctcaacaaatgaactcttcaccgcaaccgcgacagttcgctgcagggcctcgt
gctttacaccaacagggcggatacagggcactgcagccctactatgccaacagggccacc
atgtccaccagtgccccccgggtccagaccagcagcgggcctcgtccggtgggtcccacc
cacgtctaccagcccagctcccagatgatgatgatccctgggcagcagctgtcctttgct
ggctcccctcagggctacttcatcccccctggacagtaccgggctccctacatgccaccc
agtccacaataccccgtgaccagtggcacggcaggcttctacccaggaaccagcccggct
gaataccccacctatgcaggtgcctactacccggcccagccccagtacagccacacaccc
cctgtccaaaccgcgcctgtcatgataagccccgcccagccccagcaacaggccctgccc
cctcagccgccgccgagccaaccactggcacccaagagggagcgcaaagcgatcagaata
cgagaccccaaccaagggggccgcgatatcacagaggagatcatgtccgggggaagggcc
acctccacccccccatcacagtcctccactacagagggagaaggtccttcccagaccaac
ggagaagttacaaagcccgtcaccatgatgacgagaacagatgacaacatggaacctgca
gaaacaatggctgccatgaccccgcctcctgtgttggtgaccccagagcctgccaccgcc
accgtctcaactgaggccaagcaggaaaaagatagccaagcagccccacctaccgaacag
gtcgtcagccaatcggctgtccccacggctgcggggaaggccgaggaggccattccgcca
gaggaagaccaggcccctcccccatccccctcgcccccggcagctcctacctcccctccc
cctgcagaggtgcagacaccaccccccatcaccaccatcgctcaggtcagtgacacggtg
gatgccggtgtgaccctggcgggaaaggcagtgactcctgaagctcctcccattgaggaa
gagccttcggccgccctagcagccgtcgagaagcctcctgctctggtagcggagaaagag
gaggcagagaataaaaaggaagaagtggtggtggtggtggtggaggaggagattgtagag
aaggtaaaggaggagcctgtgcttaccaccaagccagaggtagtggcgcctgttacggtg
gtggtcgctaaagaacacactaagcccgctccacgacctttgactcccgttgccacagca
acgatcaaacactctgccccggccgtgaagccggtggtgtctgtggaagctctcactaaa
actgagagcgtggtcgagccgacagcgccgaaacaggaagctgctgtgcccgtgtctgcc
cccgttcctgccgtcaccccctctgtcctggaggcagagcccgccatggcccagaagagc
gaggcgcagacgcccctgtccaacggcctcccccaggagtaccccgacgaggtagacgcc
cccgtgcccgcacaagagcgaactgcaatgcccaacaccgagcctgccgttcccacacct
caggaaactgctacccttgcagatgctgccgtggcagaggagggggagaaagaggaagat
gcagccacggtgcccttggccagtagcccttcagaggacacgtctatgcaagctgctgtg
tctgtgccaaagaagaagaggaacatgaaggagctgaacaagaaagaggccataggagac
atgctggatgccttcaaagaggagaaggaggcggcagctgcccccgagcccttgtccact
ctggcggggcccagccctgtggcccctccccctttggtgacagccgacgcgccagacgag
acgtgggaggagaaggaggacaagcagaacgccgacacgcccccactcaaaccaggcgac
ctcaagtaccagtacaaaggagagcaatggaagcctatcgacccggaggataagaagagg
tacgacagggagttcctgctgggcttccggtacattggtgccagcatgaacaagcccgag
ggcctgcctcttatctgcgatgtggtgttggataaggccaataagacccccatgcgccca
gcggagccgggtcgcaacatgatgaacgccgggccagacttcacccccgccttcatgggt
aacctgggcagacagtcctccggaggtgggggagggggaccacggggccctggaagggac
catatgggacccccaggaccccggcgctcccagcagggccagcgcaaggagccccgcaag
atcatcatctcctcatcgctaggcggcgacgtggagctcaacaaggcagagaaagcctgg
aagcccgcggtgaagatggcggggagccgcggggccgcccccgaggaggaggagagcgac
gaccccgagcaggccaagacccaggagctgttcaagagggtccgctccatcctcaacaag
ctgacccctcagatgttccagcaactgatgaaacaggtcacagagctgaccatcgacacg
gaggagcggctgaagggagtgatcgacctcatctttgagaaggccatctctgagcccaac
ttctccgtggcctacgccaacatgtgccgctgccttatggggttgaaagtgcccaccaca
gacaagccgggagtgactgtgaacttccgtaagctgctgctgaaccgctgtcagaaggag
tttgagaaggaccaggacgacgacgtgatctttgaggccaaacagaaggagatggaggct
gcaaaagaggaggagaaagccggtctgaaggcggagctggaggaggcgaaggacaaggcg
cgccggcggtcgctgggcaacatcaagttcatcggcgagctgttcaagctgaagatgctg
acggaggccatcatgcacgactgcatcgtcaagctgctgaagaaccacgacgaggagtcg
ctggagtgcctctgtagactgctgtccacaatcggcaaggacctggactttgagaaggcc
aagccccgtatggaccagtactttgcccagatggacaagatcatcaaggagaagaagacc
tcgtccaggatccgcttcatgctgcaggacgtcatcgacctcagacggagtggctgggtg
ccccggcgaggggaacagggcccgaagaccatagaccagatccacaaggatgctgagcga
gaggagcaaatgcagctggtcaaggtccaacagcagcttatgtcaaggaatgacagtggt
ggtggaggaggaggtggtggtggaagaggtggtggtggtggtggtggaggaagagacggc
agggggggagaccgagacagaggaggaagggatcaggggggccgtgggggccagcacggt
ggccagggggctaggggcagccagccccaggacgaaggctggaacacagtgcccatctcc
accaagaacagacccatcgataccagccggctcagcaagatcaccaagcctggtgctctg
gacttcaacaaccagctccttgcgccccagctcgggggtaagggcatgtggggcagctgg
ggcaagggcagcagtggaggcaccacgggagccaagcctgctgccggagctgaaccggca
gcggagacgggccgtccggccactggcaaccgtttctctgccttgcagcagtctgctcca
ccagcgtcgtcctcggacgctgaccgcagggtaccccagaggtccagctccagtcgtgac
cgcggcggggaccgggacaggtttgaccgcttcgagcggcgcgacagtagtcgcgacgcc
cgcccgcctatcaccaagcgcagcttcagccgcgagacagaggagcgtaggagcgatagt
cgcacccctacggaaccccccgtccggcgcgtagccagcatgtctgacgaccggaacaga
ggcagccgtgaccggggaggcagtggtagccgggacagggctcctagtaaggaggctgtt
gtgaagcgtgagacaggccccacccttccccccgctgctccggccaaaccggccatgacc
gaggaggagctggacaagaagtccagcgccatcatcgaggagtatctccatctcaatgac
atgaaggaggcgctgcagtgtgtaggggagctgaacagcgccccgctgctctttgtgttt
gtgcggaacggcctggaggacactctggagcgcagcgccatcgccagggaacggatgggc
ctgctactgcaccaactcctcaaggccggcaccctgcccacaacacagtactacaagggg
ctcaaagagatcctggaggtggctgaggatatggccatagacatcccccacatctggcaa
tacctggctgagctcatcacccccatgctccatgacggaggcatccccatgggacagctc
ttcagggagatctccaagcccctggttcccctgggtaaggctggtctgctgctggtgcag
attctcaacttactctgcaaaggaatgacccataagaaggtgggtggtctgtggacagaa
gcagggctcaactggagagacttcctgccagaggatgaggacgtcaataagtttgtgact
gaacagaaaattgagtttaccctgggggaggagtcggatgagaccaatcagaagaagccc
atgagcggggaggagcttagcaaacatctggacagactgatccaggacagggctaacaac
cagcgcatcagagactgggtcgaggccaacctggacgaacagcaggcggctgccaaccag
tttgtgcgcgctctgatgacctccatttgccagtcagctgttatatgtgagaacccgtac
aaggtggacgtggagcagattacccagagggccaagctgctgcagcggtacctgagtgac
gagcatagggagctgcaggcactttacgccctccaggccctcatggtgcacatggagcaa
ccggccaatctgctgcggatgttctttgacgcgctgtacgacgaggacgtgatcaaagag
gaggccttctacaggtgggagtccagcaaagaccccgcagagcagaccggcaagggcgtg
gcccttaagtcggtcaccgccttcttcacctggctccgcgaggccgaagaggagtccgac
aaggactaa
DBGET
integrated database retrieval system
