Oncorhynchus keta (chum salmon): 118402203
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Entry
118402203 CDS
T09424
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118402203 (chd7)
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118402203 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
BRK
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
118402203
NCBI-ProteinID:
XP_035656114
LinkDB
All DBs
Position
23:34263706..34343078
Genome browser
AA seq
3216 aa
AA seq
DB search
MADPGMLSLFGDDANLFSDGLEGLGDCGFPQGQPNPMGQQMPHEHQGYGSLSSNSLHHPS
QAVPGQPKMGHPYDPFAGYEQQQGRMLGNGPAVNGMASPHSRYHNNPQQPGGGHHVYSGA
QGDGRGQPFPDGGAVWGPQAGPGQGLPPFQQQQAATQAPSHQQHGPSGPHGHQMGPYMGR
ADYATMQGHSGQTQTPPRINHFPQGMGQEPSHYMGHVGLQQNPSMTGPPMRHPAQQQQPP
QQHPQPPTQQFLHRPSQEPMASHTPRFPHSPSRQQQVLAGRPHQNMGFNMHGQAAPPGAV
TSSGQYPPYSQYGNLNQGLAGSAGMSPVMSLSSTSNNNNAMGPAQVQRYPNVGGPPQRYT
GPQVHQQPVHPNQITGQPMHPSQPMHPSQAQATPQQQPHLPTPPQGSYGSPPSMSPMRGM
GTPGGTPPPQQGRPPSAGLAPEVGGYPGVPLQPPNPMAPPQRNPTPMGAQQPHPHLQHHT
QHPSHPQQHPHMPPGQQLYPGMPPNQRLPLGQVRPPGPMAHGEPTGPQDQRLIPIQQQAP
RPGQQLQPPPMAFQQLQQVHPAQAALPPSQAQTHLAGPHHQNSPPNQPPWAPPPHQSPPT
PQKVPHIQHSPSDPSSVTTASDRTSASGANLQPAYRDQQPTDTEQKPKKKKKKKANVIEK
GGEGEKGGEGEKGGEGEKKQKKKKKKKKGVMEEGDEERKPDVGDSCGTEVDPLTGALEES
PAANKKTKKKPKDKEPKEPKPPKTLKMPKTPKEPKEKKARSTTPKAKMPKKHSTKKVEAA
EGSGSSVKETKRKREPSVSVNSDVEKSPPPPSDEEDDDGVQKRRSSRQVKRKRYTEELEF
RISDEDHDGDSPAPKSPSTNSEQQEVVETEGPVVEKIMAMRMGKKEVESGEEMEVEEFYV
KFKSFSYLHCRWADLEELEKDKRIHQKVKRFRAKQALATFVTEMDDEPFNPDYVEVDRVL
DESESTDENGEPVNLYLVKWCSLPYEDSTWELKADIDLAKIEEYEAVSARQPETKRVERP
PTDGWQKSESSRDYKNDNALREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLY
EIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVIVYHGSQASRKTIQAYEMNYRDAQG
RVIKGAYKFHAVITTFEMILTDCPELRSVPWRCVVIDEAHRLKNRNCKLLEGLKMMDMEH
KVLLTGTPLQNTVEELFSLLNFLEPERFPSENTFMQEFGDLKTEEQVQKLQAILKPMMLR
RLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGGPGGGGGAWGGGGAQV
PNLLNTMMELRKCCNHPYLINGAEEKILEDFRENHHAEMAQFHLQAMIQAAGKLVLIDKL
LPKLKAGGHRVLVFSQMVRCLDILEDYLIQKRYPYERIDGRVRGNLRQAAIDRFSRPDSD
RFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRN
SYEREMFDKASLKLGLDKAVLQSMSGRENAANGVQQLSKKEVEDLLRKGAYGALMDEEDE
GSKFCEEDIDQILQRRTQTITIESEGKGSTFAKASFVAAGNRTDISLEDPDFWQKWAKKA
ELDMDAINGRNTLVIDTPRVRKQTRHYSSMKEDELAEFSELESDGENEKPLTKPRRPQDR
AQGYPRSECFRVEKNLLVYGWGRWGDILSHGRFKRPLREQDVETICRALLAYCLLHYRGD
ENIKSFIWDLITPTEDGQSRTLTNHSGLSTPVPRGRKGKKGKPAPPAPPQLPRAEWLASC
NPDLLLQEDSYKRHLKHHCNKVLLRVRMLYYLRQEVIGDQADRILEGTDSSEMDIWIPQP
FHAEVPADWWDSESDKSLLIGVFKHGYEKYNSVRADPALCFLERVGMPDAKAIAAEQRGA
DMMADGPEGEDEDPEYKPLRMPFKDEMDDFTNSPLDDKEEAMDVESGESKPGENGAGSRG
AGRLYWPAASALTARLRRLITAYQRTHKREQLRQEAMARPDGRRRRRPREQLLSMVTDGG
GAYVHEGGAFMAEGSPYMAKGGAFIPEATALLAEGGAFFKERRQRWTRREEADFYRVVST
FGVIYDTARQRFDWTQFRAFARLDKKTDESLEKYYFSFVAMCKRVCRMQVKTDTELPDPT
LIIDPITEERASRTLYRIELLRRIREQVLPHPLLGERLRLCQPSSDLPEWWDCGRHDRDL
LLGASKHGVSRTDYHILNDPALGFLEAHRKFTKGGSAGAPQPPRDGAPSTVSEQAVAEKP
SHVKEEDVEGKEVKEEGDNDLPCTKADKPDEQEGKEDEMEGEKEEKAASPKKELKDEKAK
EEGDDLKDEEDQELKEEKMEVNGDSDGESSKEAGPEKEDTLNEVVGDQDKSPEFQEKMES
SKASEDQEIKKEKEGSPAKSPKSPNPVAEKGLEEEDEEKMEEDDKSEKSSQAEVGATSEQ
KNFDEESNASLSTTARDETRDGFCPEDGEPSAIQRNFSFSFWPKDRIMINRMDNICEAVI
KGKWPANRRQFFDIPGLLPGYPGPVASESPLQRRGLAELSMVAAAQTSFSGSEDLTLSPQ
VNEDALSMSLPKQRRRRRRKVEIEAERAAKRRNLMDMVAQLRESHQPESQSQAMDLTKGM
HHHKAASSLAGYSSSSMVPSATLKAQMELLQAATPSRHRANGSLADADLPTRRRRGRRKN
VEGLELLFINNKRGATVHSMEDSEGTKASAEGVQMPPRSYRHNIPSPSASARVPSVSAME
DGDPGTPSDKDLRDWLRQHPTYTMDMPTAYTPKSEELLLSSQFPKPKQKRHRCRNPNKID
INTLTGEERVPVVNRRNGRKMGGAMAPPMKELPRWLLENPEFAIAPDWTDIVKQSGFLPE
AMFDRLLTGPVVREEGVRRRGRRPKSEIAKATAAAAAAQAQAASSGGLNPLLMNGLFGGM
DLTSLQGLQSFQSLQLQLMGFPGMGGADSKHASAMLPLMLPGMAGMGGLPNMFGLGGLFG
NNLAAAAASAAATPATASNGNNDEGDSDETSKRDDGEGGEEGDEDKEKDTGLEAESSEAN
RDAAALNAAAAAMAASGMSASSLAFNPFLLSTMAPGLFSPYMFLPPGLGGLTMPGFPPTT
LADLQSAMAGAMGAASGAQGQEKEPSQAGPAPDRPAASTADPETADDSDSAESLEKTAES
SALEDEASALAEEADSPQDLAAEDEEEGEDAPEKSD
NT seq
9651 nt
NT seq
+upstream
nt +downstream
nt
atggccgacccagggatgttgagcctgttcggggacgatgccaacctgttctcggacggg
ctggagggcctgggggactgtgggttcccccagggccagcccaaccccatggggcagcag
atgccccacgagcaccagggctacggttcgctctcctccaactccctccaccacccctcg
caggccgtgcccggacagcccaagatgggccacccatacgaccccttcgcgggctacgag
cagcagcagggccggatgttgggcaacgggcccgccgtcaacggcatggcgtccccacat
tcgcgctaccacaacaatccccaacaacctggaggggggcaccacgtctattccggggcg
cagggtgacgggcgcggccagccattccctgacggaggagctgtgtggggcccccaggct
ggccccgggcagggattgcctccattccagcagcaacaggccgccacccaggccccctcc
caccaacaacacggcccctcagggccccacggccaccagatgggcccctacatgggccga
gccgactatgcgaccatgcagggccactctggtcagacccagacgccccctaggatcaac
cactttccccaaggtatgggccaggagcccagccactacatgggccacgtggggctccag
cagaaccctagcatgacaggtccccccatgcgccacccagcccagcaacagcagcctcca
cagcagcacccgcaaccgcctacccagcagttcctccaccggcccagccaggaacccatg
gcctcccacacccctcgcttcccccacagcccctctcgccagcagcaggtcctggccggg
aggccccaccagaacatggggttcaacatgcacggccaggcagccccccctggtgctgta
accagctcagggcaataccccccctactcccagtacggcaaccttaatcagggattagcc
ggcagtgcagggatgagtcccgtcatgagcctcagcagcaccagcaacaacaataacgcc
atggggccagcccaggtccagcgctaccccaatgtaggtggacccccacagcgctacacg
ggcccccaggtacaccagcagcctgtccaccccaaccaaatcaccggacagcccatgcac
ccttcccagcccatgcacccctctcaggcccaggccaccccccaacagcagccccacctc
cccacaccgcctcagggatcctacggctctcccccctccatgtccccaatgaggggcatg
ggaacccctgggggcacacctccgcctcaacagggccgccccccgagtgccggcctggct
ccagaggtagggggctacccaggagtcccactccagccccctaaccccatggccccccct
cagagaaaccccactcccatgggtgctcagcagccacacccccacctgcaacaccacact
cagcacccttcccacccgcagcagcacccccacatgcccccgggccagcaactctacccc
ggcatgccccctaaccagcgactcccactcggccaggtgagacctccaggtcccatggcc
cacggtgagccgaccggaccccaggatcagcggctgatccctatccagcaacaggctccc
agacctgggcagcagctgcagcctcctcccatggccttccagcagctgcagcaggtgcac
cccgcccaggctgctttgcccccgtcgcaggcccagacgcacctggccggcccccaccac
cagaactctccacccaaccagccaccctgggcgccaccgccacaccagtcgcctccaacc
ccccagaaagtgcctcacattcagcattccccttcagatccatcatccgtgacgacagct
tccgacaggacatccgcctcgggggcgaacctccagccagcctaccgtgaccagcagccc
acggacacagagcagaagccaaaaaagaagaagaagaagaaagccaacgtgattgagaag
ggtggagagggggagaagggtggagagggggagaagggtggagagggggagaagaagcag
aagaagaagaagaagaagaagaaaggcgttatggaggaaggtgacgaggagaggaagcca
gacgtcggggacagctgcgggactgaggttgaccctctgacaggcgccctggaggaatcg
ccggcggcgaataagaagaccaagaagaaaccaaaggacaaggagcctaaagaacccaaa
ccacccaagacactgaaaatgcccaagacccccaaagagcccaaggagaagaaggccagg
agcaccactcctaaggccaagatgcccaagaagcacagcactaagaaggtggaggcagca
gagggcagtggcagcagtgtgaaggagaccaagaggaagagagaaccctcagtgtcggtc
aactcagatgtggagaagtcacccccacctccctctgatgaggaggatgacgacggtgtc
cagaagcggcgctccagtcgtcaggtgaagagaaagcgctacaccgaggaactggaattc
aggatctcggatgaggaccatgatggagactccccggctcccaagtccccctccactaac
tctgagcaacaggaggtggtggagacagaggggcctgtggtggagaagatcatggccatg
cgcatggggaagaaagaggtggaatcgggagaggaaatggaagtggaagaattctatgtg
aagttcaagagtttctcctacctgcactgtcgctgggcagatctggaggagctggagaag
gacaaaaggatccaccagaaggtcaagcggttcagggccaagcaggccctcgccaccttc
gtaacagagatggatgacgagcctttcaacccggactatgttgaggtggaccgggtcctg
gacgagtcggagagcacagatgagaacggcgagcctgtcaacctgtacctggtgaagtgg
tgctccctgccctatgaggacagcacgtgggagctgaaggccgacattgacctggccaag
atcgaggagtacgaggccgtctcggcccgccagcccgagacaaagcgcgtggagcgacct
cccactgacggctggcagaaatccgagagttccagggattataaaaacgacaacgcactc
agggaataccagctggagggagtgaactggctgctcttcaactggtacaatacacggaac
tgcatcctagcagatgaaatgggcctgggcaagaccattcagtcaatcacattcctctat
gagatctacctgaaggggattcacgggcccttcctggtcatcgcccccctctccaccatt
ccaaactgggagagggagttccgcacctggaccgaactaaacgtgatcgtctaccatggc
agccaggccagccgcaagaccatccaggcctacgagatgaactaccgtgacgcgcagggt
cgtgtgataaagggagcgtacaaatttcatgcagtcatcaccacgtttgagatgatcctg
acggactgcccggagctgcgcagcgtcccgtggcgctgtgtggtcatcgacgaagctcac
cgcctcaaaaacaggaactgcaaactgctcgagggactcaagatgatggacatggagcac
aaggtgctgctgaccggaacgcccttgcagaacactgtggaggagctcttcagtctgctc
aacttcctggagcctgaacgcttcccctcagagaacaccttcatgcaggagtttggcgac
ctcaagactgaggagcaggtccagaagctgcaggccatcctgaagcccatgatgctgcga
cgtctcaaggaggatgtggagaagaacctggcccccaaggaggagaccatcatcgaggtg
gagttgaccaacatccagaagaagtactaccgggccatcctggagaagaacttctccttt
ctgtctaaaggaggaccgggaggtggtggtggtgcatggggaggcggaggggctcaggtc
cccaacctgctcaacaccatgatggagctgaggaagtgctgcaaccacccctacctcatc
aatggtgcagaggagaagatcctggaggacttccgcgagaaccaccacgccgagatggcc
cagttccacctgcaggccatgatccaggcggcgggcaagctggtgctgatcgacaagctg
ctgcccaagctgaaggccggaggacacagggtccttgtcttctcccagatggtgcgctgc
ctggacatcttggaggactacctcatccagaaacggtacccgtacgagcgtatcgatggc
cgcgtgagaggtaacctccggcaggctgcgatcgaccgcttctctcgaccggactccgac
cgctttgtcttcctgctgtgtacccgggccgggggcctgggcatcaacctgactgctgca
gacacctgcatcatctttgactcagactggaacccccagaatgacttacaggcccaagcc
agatgccacaggattggccagagcaaggcggtgaagatctacagactgatcactaggaac
tcctatgagagggagatgtttgacaaggccagcctcaagctgggccttgacaaggctgtg
ctgcaatccatgagtggccgagagaacgcagccaacggggtgcagcagctgtctaagaag
gaagtggaggacctcctccgcaaaggagcttacggagctctgatggacgaggaggacgag
ggctcgaagttttgcgaggaagacattgaccagatcctccagagacgaacccagaccatc
accattgagtccgagggcaaggggtccaccttcgccaaggcgagcttcgtggccgctggg
aacaggacggacatttccctggaggacccagacttctggcagaagtgggccaagaaggca
gagctcgacatggatgctatcaatggacggaacaccctggtgattgacacgccgagggta
cggaagcagacacgccactacagctcaatgaaggaggacgagttggcggagttctccgag
ctggagagtgacggcgagaacgagaagcccttgactaaacccaggcggccacaggaccga
gcccaagggtacccccgcagcgagtgctttagggtggagaagaacctcctggtttatggg
tggggtcgctggggagacatcctgtcccacgggcgtttcaagcggcccctgcgggagcaa
gatgtggagaccatctgccgcgccctgctggcctactgcctgctgcactaccgtggcgac
gagaacatcaagagcttcatctgggacctcatcacgcccaccgaggatggacagagccgc
acgctcactaaccattccggtctgtctactccagtaccacggggtcgtaagggcaagaaa
gggaaaccagccccgcctgcccctccccagctccccagggcagagtggctggccagctgt
aaccctgacctgctactgcaggaggacagctacaaaagacacctcaaacaccactgtaat
aaagttctcctgagggtccgtatgctctactatctgcgacaggaagtcatcggtgaccaa
gccgaccggatcctagagggaacagactcaagtgaaatggatatctggatccctcagcct
ttccacgccgaggtccctgccgattggtgggacagcgagtcggacaaatcgctcctcatc
ggcgtcttcaaacacggctatgagaagtataactcggtgcgcgccgaccctgcactgtgt
ttcttggagcgggtgggcatgcctgacgccaaggccatcgctgcagagcagaggggggcg
gacatgatggcagatggtccggagggagaggatgaggacccagagtacaagcctctccgc
atgccctttaaagatgagatggatgacttcactaactctccccttgatgacaaagaggaa
gctatggatgttgagagtggtgaatctaaaccaggtgagaatggagcaggcagcagaggg
gcgggtcgtctgtactggccggcagcttcggccctcaccgctagactccgccgcctcatc
actgcctaccagcggacgcacaaacgtgagcagctccgccaggaggccatggcccggccc
gacggccgccgccgccggcggccccgagaacagctactctccatggtcacagatggtgga
ggggcctacgtgcatgagggcggagccttcatggcagagggcagtccttatatggccaag
ggcggagcgttcattcccgaggcgacggctctcctggcggaaggaggggccttcttcaaa
gagaggcgtcaaaggtggaccaggcgtgaggaagctgacttttaccgcgtggtgtccacg
tttggcgtgatctatgacacggcccgtcagcgctttgactggacccagttcagggccttc
gcccgtctggacaagaagactgacgagagcctagagaaatactacttctccttcgtggct
atgtgcaaacgggtgtgtcgcatgcaggtcaagaccgacacagagctcccagaccccacc
ctgatcattgaccccatcacggaggagcgggcatcacgcaccctttaccgcatcgagctg
ctgcgccgcatccgcgagcaggtgttgccccaccccctgctgggcgagcgcttgcgcctc
tgccagcccagctctgacctgccggagtggtgggactgcggcaggcatgaccgcgacctc
ctcctgggtgcctccaagcacggcgtgagccgcaccgactaccacatcctcaacgaccca
gccttgggcttccttgaggcccacaggaagttcaccaaggggggatcggctggggcgcct
cagcctccccgcgatggagctccctctactgtctctgagcaggctgttgctgagaaaccc
tctcatgtcaaagaggaggatgtggaaggcaaggaggtgaaagaggaaggtgacaacgac
cttccatgtactaaagctgacaaaccagacgagcaggaaggcaaggaagacgagatggag
ggagagaaggaagagaaggctgcgtctcccaagaaggagttgaaggacgagaaagctaag
gaggagggagatgacctaaaagacgaggaagaccaagaactgaaggaagagaaaatggag
gtcaacggtgattctgacggagagtcttccaaggaggccggacctgagaaagaagacact
ctcaatgaggtcgtcggagaccaggacaagagtccagaattccaggaaaaaatggagtct
tccaaagcatcggaagaccaggaaatcaagaaggagaaagaagggagtccagccaagtct
cccaaatctcccaatccagtggctgagaaaggcctcgaagaggaggatgaggagaagatg
gaggaagacgacaagtctgagaagtcgtctcaagctgaagttggtgccacctctgagcag
aagaactttgacgaggagagcaatgcctcactgagcaccacggccagagacgagacccgc
gatgggttctgccccgaggatggagaaccctcagccatccagagaaacttctccttctct
ttctggccgaaggatcgcataatgatcaaccgcatggacaacatctgcgaggcggtcatc
aagggcaagtggcccgccaaccgtcgtcagttcttcgacatcccgggcctgttgcctgga
taccctggccccgtagcgtcagaaagccccctgcagaggcggggcctggccgagctgtca
atggtggcggctgctcagacgagcttcagcggcagcgaggacctcaccctctcgccacag
gttaacgaggatgctctgagcatgtcgttgccaaagcagcgtcgccgcaggcggaggaag
gtggagattgaggcggagcgtgccgccaaacgaaggaacctgatggatatggtggctcag
ctcagagagtctcaccaacctgagtcccagagccaggccatggacctcaccaagggcatg
catcaccacaaggcagcgtcgtccctggcaggctactccagcagcagcatggtgccttct
gctaccctcaaggctcagatggagctgctacaggcggccacgccttccagacatagggcc
aatggctcattggccgatgctgacctgcccacccggaggagacgaggccgcaggaaaaat
gtggaggggctagagctgctgtttatcaacaacaagagaggagccacggtacacagcatg
gaggattccgaggggaccaaagcgtcagcggagggggtgcagatgcccccgcgttcctac
cgccacaacattcccagtcccagcgcctctgcccgcgtcccctctgtcagcgctatggag
gatggggaccctggtaccccctctgacaaggacctgagggactggctcagacagcacccc
acgtacacaatggacatgcctactgcatacacaccaaagagtgaggaattgctcctctcc
tcccagttccccaaacccaagcagaagcggcaccgctgccgaaaccccaacaagatcgac
atcaacactctcaccggagaagagagggttcccgtggtcaaccggagaaacggcagaaag
atgggtggagccatggcgccgcccatgaaggaactgccccgatggctcctggagaaccca
gagtttgccatcgctcctgactggaccgacattgtcaagcaatcaggcttcctccctgag
gccatgttcgaccgtctcctgactgggcccgtggtgcgcgaggagggcgtccgtcgtcgg
gggagacgtcccaaatcggagatcgccaaagcgacggcggctgctgcggcagctcaagcc
caggctgcatcatccgggggcctaaaccctctgctgatgaatggcctgtttggaggcatg
gacctcaccagcctgcagggcctacagagcttccagagtcttcagctgcagctcatgggc
ttccctggcatggggggggctgactctaaacacgcctcagccatgctgcctctcatgctg
cctggtatggctggtatgggcggcctgccaaacatgtttggcctgggaggcctgttcgga
aataacctggccgccgcagctgcctcggctgctgccacgcccgctacagcctccaacggc
aacaatgacgagggtgattcggacgagacgtcaaagagagatgacggtgagggcggagaa
gagggggatgaggacaaggagaaggacactggattggaggcggagtcgagtgaggctaac
agggacgcagcggctctgaacgcagccgctgccgcaatggccgcctccggcatgtcggcc
agctcccttgccttcaaccccttcctgctctccaccatggcccctgggctcttttccccc
tacatgttcctgccccctggcctgggaggtctcactatgcctggctttccccccaccacc
ctggctgaccttcagagtgccatggctggagccatgggggctgcttctggagctcagggc
caggagaaggagcccagccaggctggccccgccccggaccgccctgccgcatctaccgca
gacccagagacagccgacgacagtgactcagcagagagcctggagaagacggccgagtcg
tctgccctagaagacgaggcctccgcattggctgaggaagctgactcgccgcaagaccta
gcggctgaggatgaggaggaaggagaggatgcccctgagaagagtgactga
DBGET
integrated database retrieval system
