Oncorhynchus keta (chum salmon): 118402380
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Entry
118402380 CDS
T09424
Symbol
rpap2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase rpap2 isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oke01009
]
118402380 (rpap2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oke03021
]
118402380 (rpap2)
Enzymes [BR:
oke01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
118402380 (rpap2)
Protein phosphatases and associated proteins [BR:
oke01009
]
HAD phosphatases
Fcp/Scp phosphatases
118402380 (rpap2)
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
118402380 (rpap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
118402380
NCBI-ProteinID:
XP_035656431
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All DBs
Position
23:42640236..42650264
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AA seq
697 aa
AA seq
DB search
MLHIYTSGEISVSLFFLSVTKYLTSMENVPRKRVARSSKPGKRDGKSVKGAQAAAEEARR
REAVRETLREKLDLEKRALQVVERLLEDSVADDFLVDCARLITAANYKDTVEERSIVKLC
GYPVCSNKLGKVSTQQFKISTKTNKVYDITERKSFCSNFCYKASKSFELQISKSPLWLRQ
HESPPDVKLMKKGDGGSTGEEVRLAERRLREDDVENPLPLDSVSPEAPEDPRRSPTAGHS
DDSDAEHDFVSSVVSQRRGPRVHWGDLPKRTAEGEGREPGEGEDRERRSGGKDTTVPKQI
QTNEAEDKENTEESQKAQRKPSNGTDGRQQHTTDTNHQSEQQSFLGERGSPEGQSMEEAA
ELLSQVTIQDRDPATATSSALTAYSVQNQEPAPNPSPRGDPAQPTQPGINITQVGMSRRG
AQGLRGLLKGHEAGTKPVSVRLNLLEGLRRTFTEWMTEETMKFLYGPDHFSKTLIETKKE
EEEELDEDDLEDIVKDGGEGRETDSQGGPGRPLAPAPDYDTLRRETEEMGLRVREFYEGT
EEVQRLSGKQHARGGDSENQGGALPLVDSHAQHLIQKRITVEKLTKGLRDIVGPLCLTMT
DVSSDLNRLVRTFRFTNTNIIHKGPEWTLIAVVLLHLLSEVSPVVREALERPASVDYLST
LMQELPLLDRDLQSLVQLLRTAELCPHEHTEKRQTNE
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgcttcacatttatacatccggagaaatatctgtctcgttgttctttctatctgtgaca
aaatatttgaccagcatggagaacgtgccacgaaaaagagtcgctcgctcttcaaaacca
ggcaaaagggatgggaagagtgtcaaaggagcacaggccgctgcagaggaagcaagaagg
agagaggcagtgcgggagaccctgagagagaagctggatctggagaagagggctctgcag
gtggtggagcgtctcttggaggacagcgtagcagacgacttcctggttgactgtgcaagg
ttaatcactgctgccaattacaaagacacagttgaggagaggtccattgtgaagctgtgc
ggttatcctgtctgttcaaacaaactgggcaaggtctccactcaacagttcaaaatttcc
accaaaaccaataaagtctatgacatcacggaacgcaagagcttctgcagtaacttctgc
tacaaagcctccaagtcctttgagctgcagatatcaaagagccctctatggctgaggcag
cacgagagccccccagatgtgaaattaatgaagaaaggagatggcggtagcaccggagag
gaggtgaggctggctgagaggcgtctcagagaggacgatgtggagaacccccttcccttg
gactccgtgtcccccgaggccccagaggaccccaggcgctcccctacagccggccacagc
gacgacagcgacgcagaacacgactttgtctcaagcgtggtctcccagcgacggggaccc
agggtgcactggggcgatctgcccaagcgcaccgccgaaggggagggtagggaacctgga
gagggggaggacagggagagaaggtcaggagggaaggacacaacagtgcccaagcaaata
caaacaaacgaggcagaagacaaggagaatacagaagaatcacagaaagcacaaaggaag
ccaagcaatgggacagatggacgccaacagcacaccacagatacgaaccaccagagtgag
cagcaatctttcctgggagagagagggtcgccagagggccagtctatggaggaagctgca
gagctattgagccaagttacaatacaggatcgagacccagccacagctacgtcttctgca
ctaacagcctacagtgtacagaatcaagaaccagctccaaaccccagtccacggggggac
ccagcacagcccacccagcctggcatcaacatcacccaggtgggcatgagcagaagggga
gcccaggggctccgggggctcctcaagggccacgaagccgggactaaacctgtctctgtc
cggctgaaccttctagaaggcctaaggaggaccttcactgaatggatgactgaggagact
atgaagttcctatatggcccagaccactttagtaaaacactgatagaaacaaagaaggag
gaggaagaggagctagatgaagatgacttggaggacattgtgaaggatggtggggaggga
cgtgagactgactcccaagggggtccaggaaggcccttggccccggccccagactacgac
accctacgcagggagacagaggagatggggctgagggtgagggagttctacgaagggacg
gaggaagtccagcggttgtcagggaaacaacatgccagaggcggagactcagagaaccag
ggtggggcactcccgttggttgactcccatgcccagcacctcatccagaaacggattaca
gtggagaagctcactaaaggcctgagagacatcgtgggtcctctgtgtctcaccatgact
gacgtctccagtgacctcaacaggctggtcagaaccttcaggtttacaaacaccaacatc
atccacaaaggcccagagtggaccctgattgcagtggtgctcctccatttgttatcagag
gtgtccccagtggtgcgggaggccctggagaggccggcctcagtcgattacctctctact
ctgatgcaggagctcccactgctggaccgggacctgcagagcctggtccagctactcaga
accgcagagctctgtccacacgagcacacagaaaaacggcagacaaatgaatga
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