Oncorhynchus keta (chum salmon): 118402408
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Entry
118402408 CDS
T09424
Symbol
puf60a
Name
(RefSeq) poly(U)-binding-splicing factor PUF60a
KO
K12838
poly(U)-binding-splicing factor PUF60
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118402408 (puf60a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oke03041
]
118402408 (puf60a)
Spliceosome [BR:
oke03041
]
Complex A
U2 snRNP components
U2 related factors
118402408 (puf60a)
Complex B
118402408 (puf60a)
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GFIT
Motif
Pfam:
RRM_1
RRM_7
DUF1543
Motif
Other DBs
NCBI-GeneID:
118402408
NCBI-ProteinID:
XP_035656479
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All DBs
Position
23:48510374..48586728
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AA seq
523 aa
AA seq
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MAVAVSAGGEALMMENGQSTASKLGLPPLTPEQHEALQKAKKYAMEQSIKSVLVKQTLAH
QQQQLTNLQMASLTMGFGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDTVRQAFA
PFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLSLEQMNSVMLGGRNIKVGRPSNIGQ
AQPIIDQLAEEARAFNRIYVASVHPDLSDEDIKSVFEAFGRIKSCTLARDPTTGKHKSFG
FIEYDKAQSSQDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPTTPGGLPPAAAVAAAAAT
AKITAQETVGSSVLAGPALLSQQLGGLPQAVMAAQAPGVITGVTPVRPALPVLPQVGLVN
PVLALPPVLVTSLVAAQEAKKKEVEEEALQDGTGQEPLSEQEHMSISGSSARHMVMQKLL
RKQESTVMVLRNMVGPEDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEDDAEVIVKIF
VEFSMAAEMNKAIQALNNRWFGGRKVIAEVYDQERFDNSDLSA
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcagtttctgcgggaggcgaggctctgatgatggagaatggacagagcacc
gcctcaaagctcggcctgccgcctctcacccctgagcagcacgaggcactgcagaaggcg
aagaagtatgccatggagcaaagcattaaaagtgtgctggtcaaacagaccctggctcat
caacagcagcagctcaccaacttacagatggcatcgctgacaatgggctttggcgacccc
ctctcacctttacaatcggtagcggctcagagacagcgagcattagccatcatgtgccga
gtgtacgtgggctccatttactacgagctgggagaggacacggtccggcaggcctttgcc
ccgttcggccccatcaagagcatcgacatgtcctgggactctgttacaatgaaacacaag
ggttttgcgtttgtggagtatgaggtgcctgaggcagcccagctatcccttgagcagatg
aactccgttatgctgggagggagaaacattaaggtgggacgaccgagcaacatcggacag
gcccagccgatcattgaccagctggcagaagaggcacgcgccttcaaccgaatatatgtg
gcgtctgtgcaccccgacctctcggacgaggacatcaagagtgtgtttgaggcgttcggc
cggatcaagtcatgcactctagcgagagaccccactacagggaaacacaagagcttcggc
tttattgagtacgacaaggctcagtcctcccaggatgcagtttcctccatgaacctcttt
gacctagggggtcaatacctgcgtgtgggcaaagcggtcaccccccccatgcccctgctc
actccgaccacacctggcggactcccccctgctgcagctgtggcggctgcagctgccaca
gccaaaatcactgcccaggagacggttgggtcatcggtgctggctggacccgccctcctc
tctcaacagttgggtggcctgccccaagccgtcatggcagcccaggccccgggggtcatc
acaggggtaaccccagtgcggcccgctttgcctgtgctacctcaggtgggcctggtcaac
ccagtgctggccttaccaccggtgctggtcacctctctggtggcagcccaggaggccaag
aagaaggaagtggaggaggaggccttgcaggacgggacgggccaggagccgctgagtgag
caggagcacatgagcatctccgggagcagcgccagacacatggtcatgcagaagttgctc
cgcaagcaagagtcgacggtgatggtgctgcggaacatggtaggaccagaggacatcgac
gatgacctggagggtgaggtgactgaggagtgcggcaagtttggtgctgtcaaccgtgtc
atcatctaccaggaaaagcagggcgaggaggatgatgcggaggttattgtcaagatcttt
gtggagttctccatggcggcagagatgaacaaggccatccaggcactcaataatcgctgg
tttggaggtcgcaaggtcattgctgaggtgtacgaccaggagcgctttgacaacagcgac
ttatctgcataa
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