Oncorhynchus keta (chum salmon): 118402451
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Entry
118402451 CDS
T09424
Name
(RefSeq) nucleolar transcription factor 1-A-like isoform X1
KO
K09273
upstream-binding transcription factor
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118402451
03021 Transcription machinery [BR:
oke03021
]
118402451
Transcription factors [BR:
oke03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
118402451
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
118402451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
DUF4473
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
118402451
NCBI-ProteinID:
XP_035656555
LinkDB
All DBs
Position
23:complement(43921580..43937826)
Genome browser
AA seq
715 aa
AA seq
DB search
MNGSSSVPSASQTIQIKTEPVVDAWSKEDCLTLLERIQSLLPDGDAMKYKTTESHFDWEK
VCFGDFTGDMCKQKWAKVSTEVRKFRTMTELIVDVIEFVKNPYKGKKLKTHPDFPKKPLT
PYFRFFMEKRAKYAKIHPEMSNLDLTKILSKKYKELPDKKKQKYITEFQREKESFEKNMA
RFKEDHPELIEERKKSDLPEKPKTPQQLWYNHEKKTYMKLHPDVSQKELKEALRRQWSQL
SDKKRLKWISKALELQKDYAGSMKVYQEAHPDAEEHVKSVLTKAERQLKDKFDGRPTKPP
PNGYSLYCAELMVNMKDVPSTERMVLCSKQWKVMTQKEKDMFQKRCEQKKKQYEIDLQRF
LESLPEEERDRVMTEEKLGGSRLGMGAAGSPHGAKSPSAKVGLTKLQQERCREAELEHWV
HAGLTAKEKRDGKKRTEIPETPKTAEEMWQQSVIGDYLAKYRSDRKKAQSAMESAWKAME
KKEKIPWIKKAADDQKRYEVQYRPVRELLESRMPQSGAGQRKPKFEGEPKKPPVSGYQMF
SQELLTNGELNHFSLKERMVEIGKRWHKLSQSHKDKYKKLVEELQIEYKAELEAWVKSLS
PQERAVYKEFSTTKRQSTTKARGAQGAKVCLMATVKGKVVGAKAAVEVGGGKRAMAYRAK
QDTSDSDEDDKTDSSDSDDEESSGSSDSEDENDDDDPSEGSSSSSSEDSSDSDSD
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcagcagcagtgtgccctctgcctcccagaccattcagataaaaaccgagcca
gttgtggatgcttggagtaaggaggactgcctcactcttttggagaggattcagagcctg
ttgcctgatggtgatgccatgaaatacaaaaccaccgagtcccactttgactgggagaag
gtctgcttcggagacttcaccggcgacatgtgcaaacagaagtgggcgaaggtgtctact
gaggtgcggaagtttaggactatgacagagctcatagtcgacgtcattgagtttgtgaag
aacccttacaaagggaagaaattgaagacacacccagacttcccaaagaaaccccttacg
ccgtatttccggttcttcatggagaagcgagccaagtatgccaagatccacccggagatg
agcaaccttgacctcaccaagattctgtccaagaaatacaaggagctcccagacaagaaa
aagcaaaagtacatcacagagtttcagcgagagaaggagtcatttgagaagaatatggcc
cgattcaaagaggaccacccggagttgatcgaggagagaaagaagtcggacctccctgag
aagcccaagacgccccagcagctgtggtacaaccatgagaagaagacctacatgaagctc
caccctgatgtgagccaaaaggagctgaaggaggctctgaggagacagtggtcccagctc
tcagacaagaagagactaaaatggatcagcaaggccctggagctgcagaaagactatgcg
ggcagtatgaaggtctaccaagaggcccatccagatgctgaagagcacgtcaagtccgtc
ctcaccaaagccgagcggcagctcaaggacaagttcgacggcaggccaaccaaaccaccg
ccgaacggttactccctatactgtgccgagctgatggtgaacatgaaggatgttcccagt
acggagcgtatggtgctgtgcagtaagcagtggaaggtgatgacgcagaaggagaaggac
atgtttcagaaacgctgtgagcagaaaaagaagcagtatgaaattgacctacagcggttt
ctagagagtctcccagaggaggagagggaccgcgtgatgacggaggagaagctggggggc
tcgcggctgggcatgggggctgctggcagcccgcatggagccaagtccccctccgccaag
gtgggtctcacaaaactacaacaggagcgctgtcgcgaagctgagctggagcactgggtg
cacgctggcctgacggcgaaagagaagcgcgacggcaagaagaggaccgaaatccccgag
acgcccaagactgccgaggaaatgtggcaacagagcgtcataggagactacctggccaag
tacaggagtgaccgcaagaaggcccagagtgctatggagtcggcttggaaggccatggag
aagaaggagaagatcccgtggatcaagaaggcggccgatgaccagaagcgatacgaggtt
cagtaccggcccgtgagggaattgttggagtctagaatgccccagtcaggagcaggccag
aggaaacccaagtttgaaggggagcccaagaagccaccagtgagcggctaccagatgttc
tcccaggagctgctgaccaacggcgagctaaaccacttcagcctgaaggagcgcatggtg
gagatcggcaagcgctggcacaaactcagccagagccacaaggacaagtacaagaagctg
gtggaggagctgcagattgagtacaaggccgagctggaggcttgggtcaagtctctctct
ccccaggagcgagctgtttataaagagttctccaccacaaaacgacagagcaccaccaag
gcgcggggcgcccagggggccaaggtgtgtttgatggcgacagtgaaggggaaggtggta
ggtgccaaagccgcagtagaggtcggagggggcaagcgggccatggcgtaccgggccaag
caggatacgtctgactcggacgaggatgataagacggactcgtcagactctgatgatgaa
gaatcgtctggcagctccgacagcgaagatgagaatgacgacgacgacccatccgagggc
tccagcagctcttcctcagaggacagcagtgactcggactcagattag
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