Oncorhynchus keta (chum salmon): 118402716
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Entry
118402716 CDS
T09424
Name
(RefSeq) ras-related protein Rab-40B-like
KO
K07928
Ras-related protein Rab-40
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118402716
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
oke04031
]
118402716
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
118402716
GTP-binding proteins [BR:
oke04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
118402716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
Motif
Other DBs
NCBI-GeneID:
118402716
NCBI-ProteinID:
XP_052333743
LinkDB
All DBs
Position
24:14245695..14293632
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AA seq
288 aa
AA seq
DB search
MNHRTSPAKAYDFLLKFLLVGDSDVGKGEILASLEDGASESPYGYNMGIDYKTTTILLDG
RRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEIDEHAPGVP
KILVGNRLHLAYKRQVTTEQAQLYAERLGVTFFEVSPLCNFNITESFTELARIVLMRHGM
ERLWRPNKVLSLQDLCCRSIVSCTPVHLVDKLPLPLALKSHLKSFSMANGLNARMMHGSS
YSVTTTNTTHIATKRTGGQLLKNKKCIRPQQLSPAAAQSCTGNSCKIS
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacagaaccagccccgccaaggcttacgattttctgctcaagtttctcctggtc
ggggacagcgatgtgggaaagggggagatacttgcgagcctcgaggacggagccagcgag
tctccatatggctacaacatgggaatcgactacaagacgactacgatactcctagatgga
agaagagtcaagctgcagctctgggacacatctggccaggggcgcttctgcaccatcttc
cgctcctactccagaggagcacagggtgtgatcttggtctatgacatcaccaaccgatgg
tcctttgatggtattgacagatggataaaggagatagatgagcatgcaccaggtgttccc
aagatcctggtgggtaaccggttacacctggcctacaagcgtcaggtgaccacggagcag
gcccagctgtacgctgagaggttaggggtaaccttcttcgaggtcagcccgctgtgcaac
ttcaacatcacagagtccttcacagagctggccaggattgtcctgatgaggcacggtatg
gagagactctggagacccaacaaagtgttgagtctccaggacctgtgctgtcgttccatc
gtgtcttgcacccctgtccacctggttgacaagcttcctctccccctggccctcaagtcc
cacctcaagtctttctccatggccaacggcctcaatgcccgcatgatgcacggaagttcc
tactctgtcaccaccaccaacaccactcacatcgccaccaagaggaccggaggccagctg
ctaaaaaataaaaaatgtatccgccctcagcagctcagcccggcggccgcacagagctgc
accggcaacagctgcaagatctcctag
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