KEGG   Oncorhynchus keta (chum salmon): 118402809
Entry
118402809         CDS       T09424                                 
Symbol
wdr43
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    118402809 (wdr43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:oke03009]
    118402809 (wdr43)
Ribosome biogenesis [BR:oke03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    118402809 (wdr43)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_THOC3 WD40_Prp19 Utp12 WD40_WDHD1_1st Beta-prop_EML_2 ANAPC4_WD40 WD40_Gbeta WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_SPT8 EIF3I Beta-prop_VPS8 Beta-prop_Aladin Beta-prop_WDR41 Beta-prop_WDR75_1st Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_ACSF4 WD40_2 Beta-prop_HPS5 Beta-prop_RSE1_2nd NBCH_WD40 Tricorn_2nd Beta-prop_IP5PC_F Beta-prop_SCAP SGL MinC_C
Other DBs
NCBI-GeneID: 118402809
NCBI-ProteinID: XP_035656977
LinkDB
Position
2:53208975..53241831
AA seq 646 aa
MAIHADIGSIMAADGGSFSLGLPCVFSPKSRQYLALCAQDGRLRIWNTDIKTLNQEYVPS
AHLSATCTCISWGPCRKAKEGPQRKKRKSEAGQVENQVDLLALGTAAGSVIIYSTVKGAL
HCTLDGSHSGVVNCVQWHPEDCLLYSGSDDTHIVEWDLQTGKARCKWKADRAPVTSLCVS
PDGKLLLSAGHTIKMWDLETKEVYRKFTGHSTAVTTLRFATTRPPDSNGLYFLSGAAHDR
LLSVWQVREDGKDKNSVVSFNLTDEPHHIDLFTSNSKEEALRLAVVCKDGQLHLFEHFLN
GPCKKPLSPLCTVQMTGVEDSPIPVPLLAAALTTDTHSLLLAYGNHLQPVMERVEVNTAE
RHVCLTRDVHTTLSLTMETTVSKVKTPVVNAKSKVVVPGLPGHQAPVKGALGSEKRKGTD
AKEMSIEERLGKIEMSSEKGVKGAPSLQTDNFAVLLVQGLESKDASILNKVFQTRKDMLI
KKTVARVPLPAVLPLVEEITKRMQGHPYTAVLMVRWLKAVLMQHTSYLASLPDLVFQLGV
LYHMIESRVKMFHKLTKLHGKLYLLMTQVATSSNEVKDVDHTAKLVYEEESSDEDNATGD
EGLPDEDSDNWEEDETMEDKAEEGMRMESKVTGDSDIEPGNESEEE
NT seq 1941 nt   +upstreamnt  +downstreamnt
atggcaatccacgcagacattggttcaataatggcggctgatggaggtagtttttctttg
gggctaccctgcgttttctctccaaagtcacgtcaataccttgctttatgtgctcaggat
ggcagacttcgtatttggaacacagatattaaaacacttaatcaagaatacgtgccttca
gcacacttgagtgccacttgtacctgcatatcttggggaccatgccgaaaggccaaggag
ggacctcaacggaagaagaggaaatcagaggcaggacaggtggagaatcaggtggacctg
ttggctctgggcacggctgcgggcagcgttatcatctacagcacagtgaaaggagcactg
cactgtacactggacggaagtcacagtggtgtggtgaactgtgtgcagtggcaccctgag
gactgcctgctgtacagtggctcagacgacacacacatcgtagagtgggacctacagacg
ggcaaggcgcgctgtaagtggaaggctgatcgtgccccagtgaccagtctgtgtgtgagt
ccggatggcaagctgctgctctcagcgggacataccatcaagatgtgggacctcgagacc
aaggaggtgtaccggaagttcacaggtcactccacagcggtgacgaccctgcgcttcgcc
accacacgccccccggatagtaacggcctctacttcctctccggcgcggcccacgacaga
ctcctcagcgtgtggcaagtccgggaggacggcaaggacaagaactcagtggtgtccttc
aacctaactgacgagcctcaccacatagacctcttcacctccaacagcaaggaagaggcg
ttgaggctagcagtggtgtgtaaagacggccagcttcatctctttgagcattttttgaac
gggccctgtaagaagcccctgtccccgttgtgtacagtgcagatgactggggtggaggac
agccccattcccgttcccctgttggctgcggccctcactacagacacacacagcttgctg
ctggcctacggcaaccacttgcagcctgtcatggagagagtggaggtgaacacggcagag
agacatgtttgcctgacccgtgatgtccacaccaccctctccctcaccatggaaaccaca
gtctccaaggtgaaaaccccagtagttaatgccaagagcaaagttgtcgtccctgggctt
cccggtcaccaagcgccggtcaaaggagccctgggatccgagaagagaaagggcacagat
gccaaagagatgtctatagaggagcgactgggcaagattgagatgtcatctgaaaagggt
gtcaagggggccccttctctgcagaccgacaactttgcggtgctgctggtgcagggcctg
gagagcaaggacgccagcatcctcaataaagtgtttcagacccggaaggacatgttgata
aagaaaacagttgcgcgggtacccctccctgccgtcttgccattggtggaggagatcacc
aagagaatgcaagggcatccatacacggcagtgctgatggtgcgatggctcaaggctgtt
ctcatgcagcacacctcctacttagcctctttgccagacctggtgtttcagctgggagta
ctgtaccacatgattgagagtagagtcaagatgttccacaagctgaccaagctgcacggc
aagctctatctgctcatgacacaggtggcgacaagcagcaacgaagtcaaagacgtggac
cacacggccaagcttgtctatgaagaggagtcctctgatgaagacaatgctacaggtgac
gaaggtcttccagatgaggattctgataactgggaggaggatgagactatggaagacaag
gcggaggaaggcatgaggatggaatcaaaagtgactggcgattccgacattgaaccgggg
aatgagagcgaggaggagtga

DBGET integrated database retrieval system