Oncorhynchus keta (chum salmon): 118402809
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Entry
118402809 CDS
T09424
Symbol
wdr43
Name
(RefSeq) WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
118402809 (wdr43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oke03009
]
118402809 (wdr43)
Ribosome biogenesis [BR:
oke03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
118402809 (wdr43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40
Beta-prop_THOC3
WD40_Prp19
Utp12
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
WD40_Gbeta
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
EIF3I
Beta-prop_VPS8
Beta-prop_Aladin
Beta-prop_WDR41
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_ACSF4
WD40_2
Beta-prop_HPS5
Beta-prop_RSE1_2nd
NBCH_WD40
Tricorn_2nd
Beta-prop_IP5PC_F
Beta-prop_SCAP
SGL
MinC_C
Motif
Other DBs
NCBI-GeneID:
118402809
NCBI-ProteinID:
XP_035656977
LinkDB
All DBs
Position
2:53208975..53241831
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AA seq
646 aa
AA seq
DB search
MAIHADIGSIMAADGGSFSLGLPCVFSPKSRQYLALCAQDGRLRIWNTDIKTLNQEYVPS
AHLSATCTCISWGPCRKAKEGPQRKKRKSEAGQVENQVDLLALGTAAGSVIIYSTVKGAL
HCTLDGSHSGVVNCVQWHPEDCLLYSGSDDTHIVEWDLQTGKARCKWKADRAPVTSLCVS
PDGKLLLSAGHTIKMWDLETKEVYRKFTGHSTAVTTLRFATTRPPDSNGLYFLSGAAHDR
LLSVWQVREDGKDKNSVVSFNLTDEPHHIDLFTSNSKEEALRLAVVCKDGQLHLFEHFLN
GPCKKPLSPLCTVQMTGVEDSPIPVPLLAAALTTDTHSLLLAYGNHLQPVMERVEVNTAE
RHVCLTRDVHTTLSLTMETTVSKVKTPVVNAKSKVVVPGLPGHQAPVKGALGSEKRKGTD
AKEMSIEERLGKIEMSSEKGVKGAPSLQTDNFAVLLVQGLESKDASILNKVFQTRKDMLI
KKTVARVPLPAVLPLVEEITKRMQGHPYTAVLMVRWLKAVLMQHTSYLASLPDLVFQLGV
LYHMIESRVKMFHKLTKLHGKLYLLMTQVATSSNEVKDVDHTAKLVYEEESSDEDNATGD
EGLPDEDSDNWEEDETMEDKAEEGMRMESKVTGDSDIEPGNESEEE
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggcaatccacgcagacattggttcaataatggcggctgatggaggtagtttttctttg
gggctaccctgcgttttctctccaaagtcacgtcaataccttgctttatgtgctcaggat
ggcagacttcgtatttggaacacagatattaaaacacttaatcaagaatacgtgccttca
gcacacttgagtgccacttgtacctgcatatcttggggaccatgccgaaaggccaaggag
ggacctcaacggaagaagaggaaatcagaggcaggacaggtggagaatcaggtggacctg
ttggctctgggcacggctgcgggcagcgttatcatctacagcacagtgaaaggagcactg
cactgtacactggacggaagtcacagtggtgtggtgaactgtgtgcagtggcaccctgag
gactgcctgctgtacagtggctcagacgacacacacatcgtagagtgggacctacagacg
ggcaaggcgcgctgtaagtggaaggctgatcgtgccccagtgaccagtctgtgtgtgagt
ccggatggcaagctgctgctctcagcgggacataccatcaagatgtgggacctcgagacc
aaggaggtgtaccggaagttcacaggtcactccacagcggtgacgaccctgcgcttcgcc
accacacgccccccggatagtaacggcctctacttcctctccggcgcggcccacgacaga
ctcctcagcgtgtggcaagtccgggaggacggcaaggacaagaactcagtggtgtccttc
aacctaactgacgagcctcaccacatagacctcttcacctccaacagcaaggaagaggcg
ttgaggctagcagtggtgtgtaaagacggccagcttcatctctttgagcattttttgaac
gggccctgtaagaagcccctgtccccgttgtgtacagtgcagatgactggggtggaggac
agccccattcccgttcccctgttggctgcggccctcactacagacacacacagcttgctg
ctggcctacggcaaccacttgcagcctgtcatggagagagtggaggtgaacacggcagag
agacatgtttgcctgacccgtgatgtccacaccaccctctccctcaccatggaaaccaca
gtctccaaggtgaaaaccccagtagttaatgccaagagcaaagttgtcgtccctgggctt
cccggtcaccaagcgccggtcaaaggagccctgggatccgagaagagaaagggcacagat
gccaaagagatgtctatagaggagcgactgggcaagattgagatgtcatctgaaaagggt
gtcaagggggccccttctctgcagaccgacaactttgcggtgctgctggtgcagggcctg
gagagcaaggacgccagcatcctcaataaagtgtttcagacccggaaggacatgttgata
aagaaaacagttgcgcgggtacccctccctgccgtcttgccattggtggaggagatcacc
aagagaatgcaagggcatccatacacggcagtgctgatggtgcgatggctcaaggctgtt
ctcatgcagcacacctcctacttagcctctttgccagacctggtgtttcagctgggagta
ctgtaccacatgattgagagtagagtcaagatgttccacaagctgaccaagctgcacggc
aagctctatctgctcatgacacaggtggcgacaagcagcaacgaagtcaaagacgtggac
cacacggccaagcttgtctatgaagaggagtcctctgatgaagacaatgctacaggtgac
gaaggtcttccagatgaggattctgataactgggaggaggatgagactatggaagacaag
gcggaggaaggcatgaggatggaatcaaaagtgactggcgattccgacattgaaccgggg
aatgagagcgaggaggagtga
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