Oncorhynchus keta (chum salmon): 118402849
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Entry
118402849 CDS
T09424
Symbol
abcb10
Name
(RefSeq) ATP-binding cassette sub-family B member 10, mitochondrial isoform X1
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
118402849 (abcb10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oke02000
]
118402849 (abcb10)
Transporters [BR:
oke02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
118402849 (abcb10)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_16
AAA_21
AAA
AAA_29
DUF87
Zeta_toxin
AAA_25
RsgA_GTPase
nSTAND1
AAA_33
AAA_5
P-loop_TraG
NB-ARC
Motif
Other DBs
NCBI-GeneID:
118402849
NCBI-ProteinID:
XP_035657073
LinkDB
All DBs
Position
24:24748899..24756243
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AA seq
717 aa
AA seq
DB search
MGLLLLQLSKCPGVNILKREVHSRVNKLFWLECQTSRGQREVSGKRFESVARSSLSHPRR
CNSLVLCVPLRQFTIPPHLLRNSWTATVHFANYSSSTNSKQATQQEVDSKDLQSTETKQS
PTRIPTEDVKRILQLAHPERLRLSAAVGFLMVSSAVTMSAPFFLGQVIDTIYTSSSEDFS
ASLRSLCIMLSGVFLCGGAANAARVYLMQISGQQIVRNLRVFLFSSILRQEVGFFDKTRT
GELINRLSADTALIGRSVTDNLSDGLRAVAQATAGVSMMFYVSPSLAAFVLLIVPPMAGL
AVIYGRYLRSISKRTQDSLAEATQLAEERISNMRTVRAFGKELTEVAKYTEKANYVLHLA
KQEAVLRAGFFGATGLSGNIIILSVLYKGGLLMASEHMTVGELSSFLMYAFWVGISIAGM
SSFYSELMKGFGAGARLWELLDRKPEFPLNEGIVLRPEQLKGQLEFQNVSFAYPTRKDAP
IFQDLSLSVPAGSVMAVVGPSGSGKSTLVSLLLRLYDPVAGVITIDGHDVRDLNPYWLRS
HIGTVSQEPVLFSCSIAENIAYGAPDSGTVTVQEIHRAAQIANAYEFVRGFPKGFDTVVG
EKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEFLVQEALERLMDGRTVLII
AHRLSTIQNADAVAVLDQRRVVECGQHAQLLGNRQGLFRKLMEKQAFLQEGQKQALR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgggactgttgctgttgcaattgtcaaaatgtccaggcgtgaatattttgaagcgcgag
gttcactcccgtgtaaataaactattttggttagaatgccagacgtccaggggacaacga
gaggtgagtgggaaaaggttcgaatctgtggcacgctcttcgctttcacacccgaggaga
tgcaactctcttgtgctctgtgtaccacttagacagttcaccatacccccccatttgttg
aggaactcatggacagcaactgtacactttgccaactacagctcttcgacaaactcaaaa
caagcaacacaacaagaagttgacagcaaagatctgcagtcaacggaaacaaaacaatcc
ccaactcggatacccactgaggatgtcaaaaggattttacaacttgcccaccctgagcgc
ttgcgactgtcagcggctgtgggcttcctaatggtctccagcgctgtcacaatgtcggcg
cccttcttcctgggccaagtcattgacaccatctacaccagctcttcagaggacttcagt
gcctccctccgctctctgtgtatcatgctttcaggggtattcctttgtgggggtgccgct
aatgctgcccgtgtctacctcatgcaaatctcaggtcaacagattgtgagaaatctacgt
gtattcctattctcctcgattctgaggcaggaggtaggtttctttgataagacccgtacc
ggggaactcattaaccgcctatctgcagacacggcactcatcggccgctccgtcacagac
aacctttctgacgggctccgcgctgtcgcccaggcaacagctggggtcagcatgatgttt
tacgtgtcaccaagtttagcagcctttgttctgctgattgtgcctcctatggctggtcta
gctgtcatatatgggagatacctgcgctccatatccaaacgtacacaggactctctggct
gaggccacacagttggcagaagaacgcatcagcaacatgaggacagttcgggcgtttggt
aaggagctgacagaggtggccaagtatacggagaaggccaactatgttctccacctggcc
aaacaggaagccgttttgagggctggcttctttggcgcgactggactcagtggcaacatc
atcatcctgtcagtgctgtataagggagggctattgatggccagtgaacacatgactgtg
ggagagctctcttccttcctcatgtacgccttctgggtgggcattagcattgcaggtatg
agctccttctactctgaactgatgaagggctttggcgcaggggcacggctttgggagcta
ctggacaggaagcccgagttccccctcaatgagggtattgtactgaggccggagcagctt
aagggtcaactggagttccagaatgtctcctttgcctacccaacccgcaaagacgcccct
atcttccaggacctgagtctctctgtgcctgctggctccgtcatggccgtggtagggccc
agcggatcgggcaaatccactctggtctccctgctgctcaggctctacgacccagttgca
ggtgtgatcactatcgacgggcatgatgtgagagatttgaatccttattggctgaggagt
cacattggaactgttagtcaggagcctgtactcttctcctgttccatcgctgagaacatt
gcctatggagcgcccgactctggcacggtcacagttcaggaaatccaccgggctgcacag
attgccaacgcttatgagtttgtccgaggtttcccaaaaggctttgacactgtggtggga
gagaagggtgttcttctctcaggtggtcagaaacagagaattgctattgcaagggctctg
cttaagaaccccaagatacttctacttgatgaggctacaagtgccctggatgcagagaat
gagttcctggtccaggaggctctagagcggctcatggatgggcgcacagtgctgatcatc
gcccaccgcctctccaccatccagaacgctgacgccgtggctgtgctggaccagcggcgt
gtggtggagtgtgggcagcatgcacagctcctgggcaaccgccaaggcctcttcaggaag
ctgatggagaaacaagcctttcttcaagaggggcaaaagcaagcgttgcgttga
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