Oncorhynchus keta (chum salmon): 118402915
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Entry
118402915 CDS
T09424
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1-like isoform X1
KO
K17908
autophagy-related protein 18
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04136
Autophagy - other
oke04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118402915
04136 Autophagy - other
118402915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118402915
03029 Mitochondrial biogenesis [BR:
oke03029
]
118402915
Membrane trafficking [BR:
oke04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
118402915
Mitochondrial biogenesis [BR:
oke03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
118402915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_MABP1-WDR62_2nd
WDR55
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_Vps41
BCAS3_WD40
Beta-prop_IFT140_1st
EIF3I
Beta-prop_HPS5
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
118402915
NCBI-ProteinID:
XP_035657175
LinkDB
All DBs
Position
24:28075788..28085901
Genome browser
AA seq
388 aa
AA seq
DB search
MEDPETFDGPGGPQDLISSSFNQDTTSLSVGTKSGYRLFSVTSVDKMDCIHEGAESPDVY
IVERLFSSSLVVVVSLSMPRRMNVYHFKRGTEICNYSYSNNILSVRLNRQRMVVCLEESV
YIHNIKDMKLLKTLLNIPHNPSGLCALSVNHDNSYLAYPGSETIGEIMVYDANNLSTVTM
IPAHDSPLAALTFNVSGTKLASASERGTVIRVFTIPEGQRLFEFRRGMKRYVSISSLSFS
SDAQFLCASSNTETVHIFKLERHSPSREGGCPTWGAYVGKMFTAASTYLPSQVSDMMHQD
RAFATVRLNMFGLKNICALATVQKLPRLLVASSDGHIYIYNIDTQEGGECVLVRKHRLFE
GDKEPQEEQQEEEELEDRRSLPPSNSLS
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggaggacccggagaccttcgacggtccaggagggcctcaagacttgatcagctcctcg
ttcaaccaggacaccacgtctctatcagtgggcactaagtcaggctacagactcttctct
gtcacctcggtggacaagatggactgcatccatgaaggagcggagtctccagacgtgtac
atcgtggagcggttgttctccagcagtctggtggtggtggtcagtctctccatgccccga
cgtatgaatgtctaccacttcaagagaggaacagagatctgcaactatagctactccaac
aacatcctctcagtcaggctcaacagacagaggatggtagtatgtctggaggagtcagtc
tacatccacaacatcaaagacatgaagctgctcaaaacactgctcaacataccacacaac
ccctcaggtctctgtgccctctctgtgaaccatgataactcctacctggcgtaccctggc
agtgagaccatcggggagatcatggtttatgacgccaacaacctgagcacggtgacgatg
atcccagcccatgacagtccccttgcagctctcacattcaacgtgtcaggaaccaaactg
gccagcgcctccgagaggggtacagtgatccgagtgttcaccatcccagagggacaaaga
ctgtttgagttccgcagagggatgaagaggtacgtgagtatcagctcattgtcctttagt
tcagatgcccagttcctctgtgcctccagcaacacggaaacggtccatatcttcaaactg
gaacgtcacagccccagtcgagaggggggatgtcctacgtggggtgcatacgtgggaaag
atgttcacagcagccagcacctaccttccctcccaggtctctgacatgatgcaccaggac
cgggccttcgccactgtacgacttaacatgttcggtctcaagaacatctgcgccttggcc
acggttcagaagctgcctcgtctgctggtggcgtcatcagatggacatatctacatctat
aacatcgacacacaggagggaggagagtgtgtgttggtcaggaaacatagactatttgaa
ggagataaggagccacaggaagaacaacaggaagaggaggagcttgaggatagaaggtcc
ctcccaccgtcaaacagcctatcataa
DBGET
integrated database retrieval system
