KEGG   Oncorhynchus keta (chum salmon): 118402997
Entry
118402997         CDS       T09424                                 
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC5-like isoform X1
  KO
K14721  DNA-directed RNA polymerase III subunit RPC5
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03020  RNA polymerase
oke04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    118402997
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    118402997
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oke03021]
    118402997
Transcription machinery [BR:oke03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Pol III specific subunits
     118402997
SSDB
Motif
Pfam: RPC5 RPC5_C
Other DBs
NCBI-GeneID: 118402997
NCBI-ProteinID: XP_035657319
LinkDB
Position
24:30716136..30736288
AA seq 700 aa
MASEEDDDPIIQEIDVYLAKSLADKLYLFQYPVRPSSMTYDDVTHLSAKIKPKQQKVELE
MAINTLSPNYCRSKGEQIALNVDGTTSEDSNTYSVKMMDKQTFTSIQSTTNTSRYAAAVF
RKGELHITPLQGILQMRPSFSYLDKADGKHREREAANEGGDSSQDEVEEDVKAVTVRFSR
PESDQARQRRIQSYDFLQKKQAEEPWVYLHYHGLNDGRSDHERQYLYCQAMGGSENTELV
KTPKEYLAMLMPPITEEKIVRPVGPSNVLSMAQLRTLPLGDQVKTLLKNVKVIPFANLMG
LLTPGTDSTAVLRCIQQVALLVQGNWVVKSDVLYPKNSCSPHSGVPAEVLCRGRDFVMWR
FTQERSVMRKEITAIIKLLPEDVKDFLEHMAVPRINRGWEFLLPSDSDFIKKHPDVAQRQ
HMLWIGIQSKLEKVFNFSKEDVVSKKDPQTEAMHVSGEQRLKAAQERARQNQPSLQKDLS
ARRQGKGGAGPSGEAGVRVKEEPVSDGEDEPMDTSSSALPNGLVNGYPSAATSAALNPHN
GHGGTPTPSPSPELRDFVWNMFRKQHVLTLSEVKRLFNLHLASLPPGDSLFHSISDRLLQ
DTILMSHCKQILVPFPAQSTAAADEQKVFAVWETGETFDKHRQVLYEIFMKNYRVRRNVI
QTRLTQEMGDQVTKDDVDRLLKECCVSFGGMWYLKGTLQS
NT seq 2103 nt   +upstreamnt  +downstreamnt
atggccagtgaggaggacgatgaccccatcatacaagagattgatgtatacctagctaaa
agccttgcggacaagctatatctgttccagtatccagtacgcccttcctctatgacctat
gatgatgtcactcatttatctgccaagatcaagcccaagcagcagaaggtggagttggag
atggccattaacactctgagtcctaactactgtcgaagtaaaggagagcagatcgccctc
aacgtggacggaaccacctcagaggactccaacacctactctgtgaagatgatggacaaa
cagacgttcacatccatccagtccacaaccaacacctccagatacgctgctgctgtcttc
aggaaaggggagctccacatcacaccgctgcagggtatccttcagatgcgacccagcttc
tcctatctggataaggctgacggcaaacacagagagcgggaggccgctaacgaaggggga
gactcttctcaggatgaggtggaggaagacgtcaaggctgtcactgtgaggttttcccgt
cctgagtcggaccaggctcgtcagcggcgtatccagtcgtacgacttccttcagaagaaa
caggcagaggagccctgggtctacctgcactaccacggcctcaacgatggccgttcggac
cacgagaggcaatacctgtactgccaggccatgggaggctccgagaacacagaactggta
aaaacaccaaaggagtacctggcaatgctcatgccccctatcacagaggagaagattgtg
aggcccgtaggtcccagtaacgtgctgtccatggcccagctccggaccctgccgctaggt
gaccaggtcaaaaccctgttgaagaacgtcaaagtgataccgtttgccaacctgatgggt
ttgttgacccctgggacagactctactgcagtgctgcgctgcatccagcaggtggcacta
ctggtgcagggcaactgggtggtcaagagtgacgtgctgtatcctaagaacagctgtagt
ccccacagtggtgtgcctgctgaggtgctgtgtcgaggaagagactttgtgatgtggaga
ttcactcaggagcgctcagtgatgaggaaggagatcacagccatcatcaagctcctgccg
gaggatgtgaaggacttcttggaacacatggcggtgcctcgtataaaccgtggctgggag
ttcctgttgccaagcgacagtgacttcatcaaaaagcaccctgacgtggcccagcggcag
cacatgctgtggattgggatacagagcaaattggagaaggtcttcaacttctctaaggag
gacgtggtatccaaaaaggacccacaaacagaagctatgcacgtgagtggcgagcagcgt
ctgaaggcagcccaagagcgtgcacgacagaaccagccctctcttcagaaggacctgagc
gctcgtcgacagggaaagggtggagccggaccgagcggtgaagccggggtcagagtcaaa
gaggaacctgtcagcgacggtgaagacgaacccatggacacatcctcctccgctctccct
aacgggttggtaaacggttacccatccgccgccacttccgctgccttgaatcctcataac
gggcacggcgggactcccacgccctcaccgtcacctgagctgagggactttgtgtggaac
atgttcaggaagcagcatgtactgacgctgagcgaagtcaagaggctgttcaacctccac
ctggcctccctgcctcccggagacagcctgttccactccatctcagaccgcctactacag
gatactatactgatgagccactgcaaacagatactggtgccttttccagcccagagcaca
gcagctgctgatgagcagaaggtgtttgctgtgtgggagacaggagagacctttgacaag
catcgtcaggtcctgtatgagatcttcatgaagaactaccgggtgaggaggaacgtgatc
cagaccaggctgacgcaggagatgggagaccaggttaccaaggatgatgtggaccgcctg
cttaaggagtgctgtgtgagctttggagggatgtggtacctcaagggtaccctacagtcc
tga

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