Oncorhynchus keta (chum salmon): 127905968
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Entry
127905968 CDS
T09424
Name
(RefSeq) leucine-rich repeat-containing protein 4B-like
KO
K16360
netrin-G3 ligand
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04514
Cell adhesion molecule (CAM) interaction
oke04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
127905968
04517 IgSF CAM signaling
127905968
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
127905968
Cell adhesion molecules [BR:
oke04515
]
Immunoglobulin superfamily
NGL family
127905968
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_9
LRR_14
ig
LRR_1
V-set
Ig_2
LRR_NXF1-5
VEGFR1-3_N_Ig-like
LRR_EndoS
LRRNT
Motif
Other DBs
NCBI-GeneID:
127905968
NCBI-ProteinID:
XP_052375122
LinkDB
All DBs
Position
5:complement(23732632..23774501)
Genome browser
AA seq
731 aa
AA seq
DB search
MRITTVTCLPCPSPLLLLLVQLLLRLLLSGPEFVEAASPCPTHCSCSNQASRVICTRQSL
DGVPESISVNTRYLNLQENSIEVIKSDTFKHLRHLEILQLSKNKISQIEVGAFNGLPNLN
TLELFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDY
ISDAAFVGLVNLRYLNLGMCGLKDIPNLTALVRLEELELSGNRLEIIRPGSFQGLVSLRK
LWLMHSQVKVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNC
DVLWLSWWLKETVPSNTTCCARCHAPPGLKGRYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTGTTMTSVNWLTPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNSAGNTTATAVLNVTAADVGVSYFTTVTVETVEPNEGPTVYAGVMNSHNESYVITPSG
HQWRGGLPTTASSLSAWSLSSSRATRPTFTVPITAETGYSGLDDVMKTTKIIIGCFVAIT
FMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDEIGAGAGGRGSGISGGGTVSRDGG
GGGGVGGGQSLRMHHPEMVNLPNLARQEHLNHYYKAHHFNNNMMGLGMGLNNNNNPSLSP
CSQSTPNSCAQGPTSTSGGTPTGGLLPSPVPLPQLGIHSSLKGLMGKGQNPQIEPLLFKS
GSKENVQETQI
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcaccacggtgacctgccttccctgcccctctcccctcctcctcctattggtc
cagctgctactgcggctcctcctctctgggccagaatttgtagaggccgcctccccctgc
cccacccattgcagctgctccaatcaggccagtcgagtcatctgtacaagacagagtctg
gatggggtgcctgagagcatatctgtcaacacacgatacctcaacctgcaggagaattca
atagaggttatcaagtcagacaccttcaagcacttgaggcaccttgagatcctgcagctg
tctaagaacaaaatcagtcagattgaggtgggagcattcaatggcctgcccaacctcaat
acgctggagctgttcgacaaccgcctcaccctggtcccctcacaggccttcgagtacctc
agcaagctgcgggagctgtggttacggaacaaccccatcgagacgctgccgggctacgcc
ttccaccgcgtgccctcgctgcgccggctggacctgggagagctcaagaagctggactac
atctcagacgccgccttcgtgggcctggtcaacctgcgctacctgaacctgggcatgtgt
ggtctgaaggacatccccaacctgacggccctggtgcgtctggaggagctggagctgtct
gggaaccgtctggagatcatccggcctggctccttccagggcctggtgtctctccgtaag
ctgtggctcatgcactcgcaagtgaaggtcatcgagcgcaacgccttcgacgacctgaag
aacctggaggagctcaacctttcccacaactccctgcactcgctgccccatgacctcttc
accccactgcaccagctggagcgggtgcacctcaaccacaacccctgggtgtgcaactgt
gacgtgctgtggctcagctggtggctgaaggagacggtgcccagtaacactacgtgctgc
gcccgctgccacgctccccctggcctgaagggcaggtacatcggggagctggaccagagt
cacttcacctgctacgctcccgtcatcgtggagccgcccaccgacctcaacgttaccgag
ggcatggctgcagagctgaagtgtcgcacgggcaccaccatgacctcggtcaactggctc
acgcccaacggcaccctgatgacccacggctcctaccgggtacggatctccgtgctgcac
gatggtaccctcaactttaccaacgtcacgctgagggacacgggtcagtacacctgcatg
gtgaccaactcggctggcaacaccacggcaaccgccgtgcttaatgtcactgccgccgac
gttggcgtcagctacttcactactgtcaccgtggagacggtggagcccaacgagggcccg
acagtctacgcaggcgtcatgaacagccacaacgagtcatacgtcattaccccgtctggc
caccagtggaggggggggctccctaccaccgcctcctccctgtcagcctggtccttgtcc
tcatcccgggccacccggcccacctttactgtgcccatcactgccgagacgggctattct
ggccttgatgacgtgatgaagaccaccaagatcatcataggctgctttgtggccattacc
ttcatggcagccgtgatgctggtggtcttctacaagctgaggaagcagcaccagctgcac
aagcaccacggccccgcccgcgccatcgagatcatcaacgtggaggacgagattggcgcc
ggtgctggtggacgcgggagtggcatctcagggggcggcaccgtctctcgggatggaggc
ggagggggaggagtaggaggagggcagagcctgaggatgcatcacccggagatggtcaac
ctacccaacctggccagacaggagcacctcaaccactactacaaggcccaccacttcaac
aacaacatgatgggcctgggcatgggcctcaacaacaacaacaacccctccctctccccc
tgttcccagagcacccccaactcctgtgcacagggacccacctccaccagcggtggcacc
cccacgggtggcttgctgccctcccctgtgcccctgccccagctgggcatccacagctct
ctgaaggggctcatggggaaaggccagaaccctcagatcgagcctctgctcttcaagagt
ggctccaaggagaatgtgcaagagactcagatctga
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