Oncorhynchus keta (chum salmon): 127908694
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Entry
127908694 CDS
T09424
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 homolog isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04810
Regulation of actin cytoskeleton
oke05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
127908694
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
127908694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
127908694
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
127908694
Factors involved in mRNA localization
Other mRNA localization factors
127908694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
Motif
Other DBs
NCBI-GeneID:
127908694
NCBI-ProteinID:
XP_052323700
LinkDB
All DBs
Position
1:96243237..96353194
Genome browser
AA seq
1025 aa
AA seq
DB search
MASTVTLEDALSNVDLLEELPLPDQQPCIEPLPCSLMYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRLAIDRFCGEVRRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMSEPSSIQESQNLSMFLANHNKITQSLQQQLEVINGHDELLAD
IVNLCVDYYENRMYLTPNEKHMLLKVMGFGLYLMDGSNSNIYKMDAKKRINLTKIDKFFK
QLQVVPLFGDMQIELSRYIKTSAHFEENKNRWSCTSTGSSPQYNICEQMVQIREDHMRFI
SELARYSNSEVVTGSGRQEAHKTDHEYRKLFDLSLQGMQLLSQWSAHVMEVYSWKLVHPT
DKYSNKECPDNAEEYERATRYNYTSEEKFSLVEVMAMIKGLQVLMGRMESVFNHAIRHTI
YSALQDFAQLTLRDPLRQAIKKKKNVVQSVLQAIRKTICDWEAGHEPHNDPALRGEKDPK
GGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSCLEGPTIMDMEKFHRESF
FYTHLLNFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM
MEYVLYPLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKILAGS
LLLDKRLRADCKNQGANIPWPASNRYETLLKQRHVQLLGRSIDLNRLITQRVSAALYKSL
ELAINRFESEDLTSIVELEGLMNINRMTHKLLSKFLTLDSMDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKPPNAQPQYLYGSKALNLAYSS
IFGFYRHFVGPPHIKAMCRLLGYQGIAVVMEELLKVVKSLLQGTIMQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNALLFCLLSEQSLVRSSTT
APPCQ
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacggtgaccctggaggatgctctgtccaatgtggaccttctggaggagctg
cctctcccagaccagcagccctgcatcgagcccctgccctgctccctcatgtaccagccc
aacttcaacaccaactttgaggaccgtaatgcctttgtgacggggatcgccagatatatc
gagcaggccaccgtccactctagcatgaatgagatgctggaggagggccaggagtatgct
gtgatgctgtacacgtggaggagctgctctcgcgctatcccacaggtgaagtgtaatgag
cagcccaacagagtggagatctatgagaagacagtggaggtgctggagcctgaggtcacc
aagctcatgaactttatgtacttccagcgattggctatagaccggttctgtggggaggtg
cgtcgtctctgccacgctgagaggaggaaggactttgtctccgaggcctacctcctgacc
ctggggaagttcatcaacatgttcgctgtgctggatgaactcaagaacatgaagtgtagc
gtcaagaacgaccactctgcctacaaacgagctgcccagttcctcaggaagatgtcagaa
ccctcgtccatccaggagtctcagaacctctccatgtttctggccaaccacaacaagatc
actcagtctctgcagcagcagttggaggtgattaacggccacgatgagctgctggctgac
atagtcaacctgtgtgttgattactatgagaacaggatgtacctgacccccaacgagaaa
cacatgctgctcaaggtgatggggtttggtctgtacctgatggatggcagtaacagcaac
atctacaaaatggacgccaagaagaggatcaacctgacaaagattgacaagttcttcaag
caactgcaggtggtgcctctgtttggtgacatgcagattgagctgtccaggtacatcaag
accagcgcacactttgaagagaacaagaacaggtggtcatgtacctcaacaggcagcagt
cctcagtataatatctgtgagcagatggttcagatcagggaagaccacatgaggttcatc
tctgagctggctcgctacagcaacagtgaggtggtgacggggtccggtcgtcaggaggcc
cacaagacagaccatgagtacaggaagctgtttgacctgtctctgcaggggatgcagcta
ctgtcccagtggagcgcacacgtcatggaagtgtactcgtggaagctggtccatccaaca
gataagtactcgaacaaggagtgtcctgacaacgcggaggagtatgaacgagctacacga
tacaactacaccagcgaggagaagttctccctggtagaggtgatggccatgataaagggt
ttacaggtcctgatgggtcgtatggagtcggtgtttaaccacgctatccgccacaccatc
tactcggccctgcaggacttcgcccagctcaccctgagagacccgctacggcaggccatc
aagaagaagaagaacgtggtgcagagtgtcctgcaggccatcaggaagaccatctgtgat
tgggaggcaggacatgagccccacaatgaccctgccctgcgaggagagaaagaccccaag
ggaggctttgacatcaaggttcctcgccgcgccgtcggcccctccagcacacagctgtac
atggttcgtaccatgctggagtctctgatagctgataagagtggttctaagaagactctc
cgcagctgtctggagggacccaccatcatggatatggagaagttccacagagagtccttc
ttctatactcacctgctcaacttcagcgagaccctacagcagtgctgtgacctgtctcag
ctgtggttcagagagttcttcctggagctgaccatggggcgcaggatccagttccccatc
gaaatgtccatgccctggatcctcacagaccacatactggagaccaaggaggcctctatg
atggagtatgtgctgtatcctctggacctctataatgacagtgcccactacgccctgacc
aagttcaagaagcagttcctctacgatgagatagaagcagaggtcaacctgtgttttgat
cagtttgtctacaagctggctgatcagatatttgcctactacaagattctagctggaagt
ctgctgctggacaagcgtctgagagcggactgtaagaaccagggagccaacatcccctgg
cccgcgtccaaccgctacgagaccctgctgaaacaacgccacgttcagctgctgggtcgt
tccatagacctgaaccgtctgatcacccagagagtgtctgctgctctctacaagtctctg
gagctggccatcaaccgctttgagagcgaggacctcacatccatcgtggaactagaaggt
ctgatgaatatcaaccgtatgacccacaagctgctgtctaagttcctgacgctggacagt
atggacgccatgttccgggaggccaatcacaatgtctccgccccctacggacgcatcaca
ctccatgtcttctgggaactcaactacgatttcctccccaactactgctacaatggatct
accaacaggttcgtccgcacggtcctgccgttctcacaggagttccagagggacaagcca
cccaacgcccagccccagtacctgtacgggtcaaaggctctgaacctggcgtacagcagt
atctttggtttctacagacactttgttggtcctcctcacatcaaggccatgtgtcgtctg
ctggggtaccagggcatcgctgtggtcatggaggagttgctgaaagtggtcaagagcctg
ctccagggcaccatcatgcagtatgtgaagaccctgatggaggtgatgcctaagatctgc
cgtctccctcgccacgagtacggctcgccgggtatcctggagtttttccaccaccagctg
aaggacatagtggagtacgccgagttgaagactgtctgtttccagaacctcagagaagtc
ggcaatgctctcctcttctgtctgctcagcgaacagagcctggtaagatcttcaaccaca
gcgccaccttgtcagtga
DBGET
integrated database retrieval system
