Oncorhynchus keta (chum salmon): 127911283
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Entry
127911283 CDS
T09424
Name
(RefSeq) protein jagged-1b-like isoform X1
KO
K06052
jagged-1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04330
Notch signaling pathway
oke04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127911283
04371 Apelin signaling pathway
127911283
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oke04090
]
127911283
CD molecules [BR:
oke04090
]
Proteins
127911283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
MNNL
hEGF
EGF_TEN
JAG1
DSL
EGF_DL_JAG
EGF_2
JAG1-like_EGF2
EGF_CA
EGF_Teneurin
EGF_3
Motif
Other DBs
NCBI-GeneID:
127911283
NCBI-ProteinID:
XP_052333409
LinkDB
All DBs
Position
24:complement(1471117..1722906)
Genome browser
AA seq
1362 aa
AA seq
DB search
MILRLGSVVGVAAFCLHALLLWFYAKVVEGTGQFELDILSMNNRNGELLNGQCCDGSRIT
GDRKCRTDECDTYFKVCLKEYQSRVSAAGPCSFGSGSTPVLGGNVFSLKSSARNERSRIV
LPFSFAWPRSYTLIVEALDANNDTSGGDGQVIEKASHSGMINPSHQWQKLSHNGPIGQFD
YQIRVSCDEHYYGFGCNKFCRPRDEFFGHYTCDYNGNKTCLEGWSGLECNTPICRQGCST
EHGHCKEPDDCKCLYGWQGQYCDQCNPHPGCIHGTCVEPWQCLCDTNWGGHLCDKDLNFC
GTKQPCLNGGSCSNTGPDKYQCSCVEGYSGVNCERAEHACLSNPCSNGGNCVETSQGYGC
VCGAGWSGPSCSINVDECSPNPCNHGGTCQDLVHAYKCHCPPQWTGKTCRIDANECDSKP
CVNANSCRNLIGGYFCECDAGWTGLNCDINLNDSKDQCHHGGTCMDLVNGFRCVCPAGYS
GDHCERDVDECAGAPCLNGGRCQDQVNGFTCLCLAGFSGHFCQLNIDYCFANPCQNGALC
FNVAKDYYCDCSEDYEGKNCSHLKDHCHTTTCKVIDSCTVAVGSNSTPGGERYISSNVCG
PHGRCRSQAGGQFSCDCQEGFRGTYCHENINDCESSPCGNGGTCLDKVSVYKCICGDGWE
GDHCEINIDDCSTSPCHNGGTCRDLVTDFFCECMNGWKGKTCHSRESQCDEVTCNNGGTC
HDEGDTFQCKCSPGWEGATCNIAKNSSCLPNPCQYGGTCVTSGDSFTCVCKEGWEGDTCK
QNTNDCNPHPCYNSGTCVDGDNWYRCECTPGFAGPDCRININECQSSPCVFGATCVDEIN
GFHCLCPQDRSGPRCQDVTGRPCSGNSRVTPDLAKWDEDCNTCQCFNGKVVCTRMWCGLR
SCRVSGGVKGHGSRGGGVGCLSGQSCEPIREEQCFIRPCLGQGECHPSSPPPNKCHPSSG
YHDNSCANVTLTFTKDTMPRGLSIEAVCKQLRQLYVVKNVSSECSVSITCDPSTSASNEI
HLSIYTVDQWMDRSPIKEITERIIDLVSKRHGNNSIITAIAEVRVQRTPSTSHTDYMVPL
LSSVFIVLWILVLVSVFLCCMRHRRKHGNGASSSAATDDNTTNNVREQLNQIKNPINVNH
TGSGHLTTSVVIRDYEDKNSIVAKVRTHHRPEGEEDNDKERRLGNKGRFVVTAKQPAYTL
VEWEDWGLNGGLGANGPNEGDVRTAVQPSSKHPNWVNKQDNRALETPHSINQMDYNRALE
TPHSINQMDYNRALETPHSINQMDYNRALETPHSINQMDYNRALETPHSINQMDYNRALE
TPHSINQMDYNRALETPHSINQMDYNRALETPHSINQMDYIV
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atgattttgagactgggctcggttgttggcgttgctgctttttgtttacatgcgttattg
ttgtggttttatgcaaaggtggtggagggaaccggtcagttcgagttggacatcttatcg
atgaacaaccggaacggcgagcttcttaacgggcagtgttgtgacggttcacggatcacc
ggggatcggaaatgcaggacggatgagtgtgatacgtattttaaagtgtgtttgaaggaa
taccagtcgcgggtctcggctgcgggaccgtgcagtttcgggtccggatctacgcctgtc
ctgggaggaaatgtattttctttgaagagctctgcgaggaatgaaagatctaggattgtt
ttgccgttcagttttgcctggccaaggtcatacacgttgatagtggaagccttggacgct
aataacgacacgagtggtggtgatggtcaggtgattgagaaggcgtcccactctgggatg
atcaaccccagccatcagtggcagaagctcagccacaacggtcctattggtcagtttgac
tatcagatccgggtcagctgtgacgagcactactacggcttcggatgcaacaagttctgc
cgaccccgagacgagttcttcggacactacacctgcgactacaacgggaacaagacctgt
ctggagggctggtctggactagaatgtaacacacctatctgtcggcagggctgcagtaca
gaacatggacactgcaaagagccagatgactgcaagtgtctgtatggctggcaggggcag
tactgtgaccagtgtaatcctcaccctggctgtatccatggaacctgtgttgaaccatgg
cagtgtctgtgtgataccaactggggaggacatctctgtgacaaagatctgaacttctgt
gggaccaaacagccatgtctgaacggaggatcctgcagcaacacgggacctgacaaatac
cagtgttcctgtgttgagggctactctggagtcaactgtgagagggcagagcatgcgtgt
ctctccaacccctgctctaatggagggaactgtgtcgagaccagtcagggttatgggtgt
gtatgtggagcgggttggagcggaccctcctgtagcatcaatgttgatgagtgctctcct
aacccctgtaaccacggtgggacctgtcaggatctggttcatgcttataagtgtcactgt
cctcctcagtggaccggcaagacctgtcgcatagatgccaacgaatgcgacagcaagccc
tgtgtcaacgccaactcctgccgcaacctgattggtggatacttctgcgagtgtgacgct
ggttggacggggctgaactgtgacatcaatctcaacgacagtaaagaccagtgccaccac
ggaggaacctgcatggacttggtgaacgggttccgctgtgtgtgtcctgcgggttactct
ggagaccactgtgagagagatgtggatgaatgtgccggcgctccatgtctgaacggcggg
cgatgccaagaccaggtcaacggattcacctgcctctgtctggccgggttctctggacat
ttctgccaattgaatatagactactgcttcgccaacccctgtcagaacggtgctctatgc
ttcaacgtcgctaaagactactactgtgactgttcagaagactacgagggaaaaaactgc
tctcacctcaaagaccactgtcacaccaccacgtgcaaagtgattgacagctgcacggtt
gccgtgggatccaacagtacccctggaggagagcggtacatctcctccaacgtgtgtggt
cctcacggacgctgtcggagccaggcgggaggacagttcagctgtgactgtcaggagggc
ttcagaggcacatactgtcacgagaatattaatgattgtgagagcagcccgtgtggtaac
ggaggaacctgtctagataaagtcagtgtgtacaagtgtatctgtggagacggctgggag
ggggaccactgtgagatcaatatagatgactgcagcactagtccatgccataatggagga
acatgtcgagacctggtgactgatttcttctgtgagtgtatgaacggctggaaggggaag
acctgccactcccgtgagagccagtgtgacgaggttacctgtaacaacggagggacatgt
catgatgagggagacaccttccagtgcaagtgttcccctggatgggagggggctacctgt
aatatagctaagaacagcagctgtcttcctaacccctgtcagtacgggggaacctgtgtg
accagcggggactccttcacctgcgtctgcaaggagggctgggagggagacacctgtaaa
cagaataccaacgactgtaatccccacccatgttataacagtgggacctgtgtggatggt
gataactggtatcgatgtgagtgcactccagggttcgctgggccagactgcaggatcaat
atcaacgaatgccagtcctcgccgtgtgtgtttggtgcaacctgtgttgatgaaatcaat
ggcttccactgcctgtgtccccaagaccgatcaggaccacgttgtcaggacgtgacaggg
agaccgtgctcagggaacagtcgtgtcacccctgatttagccaagtgggatgaggactgc
aacacctgccagtgctttaatgggaaggttgtctgtactcgaatgtggtgtggtcttagg
tcctgccgagtcagcggtggggttaaaggccacggtagcagaggaggtggggtcgggtgt
ctgtctggtcagagctgtgaaccaatcagggaggagcagtgtttcatccgaccgtgtctg
ggtcagggggagtgccacccctcctccccaccgcccaacaaatgccaccccagctccggt
taccacgacaacagctgtgctaacgtaacacttacgttcaccaaagataccatgcccagg
ggtctgagtattgaggcagtgtgtaagcagctgagacaactgtacgtggtcaagaatgtg
tcctctgagtgttctgtttccataacctgtgacccttcaacctccgccagcaacgagatc
catctcagcatatacacagtggaccagtggatggacagatcacctataaaggagataaca
gagaggatcatcgatctggtgtctaaacgccatggcaacaacagcatcatcaccgccatt
gctgaggtcagagttcagcggacgccgagcactagccacaccgactacatggtccccctc
ctctcttcagtcttcatcgtcttgtggatcctggtgctggtctccgtcttcctgtgctgc
atgcgtcaccggcgcaaacatggcaacggagcatcgtcgtccgcggcgacagatgacaac
accaccaacaacgtccgcgagcagctcaaccagatcaagaatcccatcaacgtgaatcac
accggcagcggccatcttacgacgtcagtggtcatcagagactacgaggataaaaactcg
atcgtcgccaaggtacgaacacaccaccgccctgagggggaggaggacaacgataaagag
agacggctagggaataaaggacgctttgtggttacagccaaacagcctgcctacactctg
gtggagtgggaagactggggcctcaatggaggcctgggggccaacgggcccaacgaaggg
gacgtcaggaccgcggtgcagcccagctccaaacaccctaactgggttaataaacaggac
aacagagccctggagacgccacacagcatcaaccagatggactacaatagagccctggag
acgccacatagcatcaaccagatggactacaatagagccctggagacaccacacagcatc
aaccagatggactacaatagagccctggagacgccacacagcatcaaccagatggactac
aatagagccctggagacgccacacagcatcaaccagatggactacaatagagccctggag
acgccacacagcatcaaccagatggactacaatagagccctggagacaccacacagcatc
aaccagatggactacaatagagccctggagacgccacacagcatcaaccagatggactac
atcgtatag
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