Oncorhynchus keta (chum salmon): 127912336
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Entry
127912336 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin-like modifier-activating enzyme 1
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127912336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
127912336
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oke04147
]
127912336
Enzymes [BR:
oke01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
127912336
Ubiquitin system [BR:
oke04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
127912336
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127912336
Exosomal proteins of other body fluids (saliva and urine)
127912336
Exosomal proteins of colorectal cancer cells
127912336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_E1_SCCH
ThiF
E1_FCCH
E1_4HB
E1_UFD
Motif
Other DBs
NCBI-GeneID:
127912336
NCBI-ProteinID:
XP_052337214
EnsemblRapid:
ENSOKEG00005037146
LinkDB
All DBs
Position
27:2008222..2107514
Genome browser
AA seq
1063 aa
AA seq
DB search
MSSSPLSKKRRVSDSETKTGTHCSSSSSSNSVRTELSHTPSNGMAKNGNDAEIDEGLYSR
QLYVLGHDAMKRMQSSNVLVSGLRGLGVEIAKNVILGGVKSVTLHDQGQAEWRDLSSQFY
LREEDLGKNRAEVSQTRLAELNSYVPVVAYTEALTDDYLTQFQVVVLTNSPLEEQQRVGD
FCHSNGIKLVIADTRGLFGQLFCDFGEEMLVIDTNGEQPLSAMISMITKDAAGVVTCLDE
ARHGFENGDSVIFTEVQGMTELNGCQPIEIKTLGPYTFSIGDTTGFSDYVRGGIVSQVKM
PQKVAFKSFTTSMAEPEFVVTDFAKFERPGQLHLGFQALHSYQRKHSRLPKPWCQADGEE
LVSLAKEVNSSQTGSAKVEELDDKLIKKLAFVSAGDLAPINAFIGGLAAQEVMKACTGKF
MPMMQWLYFDALECLSEEEGGAMLTEEDCAPRNSRYDGQIAVFGSQLQEVLAKQRYFLVG
AGAIGCELLKNFAMIGLAGGEGEVIVTDMDTIEKSNLNRQFLFRPWDVTKMKSETAAAAV
KQMNPSIRITGHQNRVGPETERVYDDDFFESLHGVANALDNVDARMYMDRRCVYYRKPLL
ESGTLGTKGNVQVVIPFLTESYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDEFEGLF
KQPSENAMQYLTDAKFLERTLKLPGAQPLEVLEAVYKSLVIDCPRSWADCVTWARHHWQC
QYSNNIHQLLHNFPPEQLTSSGAPFWSGPKRCPHPLEFSTSNQLHMDYVMSGANLFAQSY
GMQGSTDRAGVAKILDSLSVPTFVPRSGVKIHVSDQELQSANVNVDDNRLEELKTLLPGP
EASSHFKLTAIDFEKDDDSNFHMDFIVAASNLRAENYNIPPADRHKSKLIAGKIIPAIAT
TTAAVVGLVCLELIKIVQGHKKVESFKNGFMNLALPFFGFSEPISAPSHKYYEIDWSLWD
RFEVKGLQANGEEMTLRQFLDYFKNEHQLEITMLSQGVSMLYSSHPAVFLLSLRLELTPM
TEIVTKVSKKKLGKHVKALVFELCCNDLTEEDVEVPXVRYTIR
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgtccagctcgccgctgtccaagaagcgtcgcgtgtcagactcagagacgaagacggga
acacactgctcctcctcctcctcctctaactctgtcagaactgaactgtctcacacaccc
tccaacggcatggctaagaatggcaatgatgctgagatcgatgaaggcctgtactccaga
cagctctacgtgttgggccatgatgctatgaagcgcatgcagagctccaacgtcctggtc
tcagggctgagagggctgggcgtggagatcgctaagaacgtcatcctaggaggagtgaag
agtgtcaccctgcacgaccagggacaggccgagtggagagacctctcctcacagttctac
ctgagagaagaggatctggggaagaacagggctgaggtgtctcagactcgcctggctgaa
ctcaacagctacgtaccagtagtggcctacactgaagccctcaccgatgattacctgact
cagtttcaggttgtggtcctgaccaactcccctctagaagagcagcagcgtgttggagac
ttctgtcacagtaacggcatcaagctggtgatcgctgacacgcggggactcttcggacag
ctcttctgcgacttcggagaggagatgctggtgatcgataccaacggagagcagcctctc
tctgctatgatctccatgatcaccaaggatgcagcaggcgtggtaacgtgtttggacgag
gctcgccacgggtttgagaacggagactctgtgatcttcactgaggtgcagggcatgacg
gagctcaacggctgccagccaatagagatcaagaccctgggcccctacaccttcagtatc
ggtgacaccacagggttctccgactacgtcaggggaggcatcgtctctcaggtcaagatg
ccccagaaggtggccttcaaatccttcaccacctccatggcagagccagagtttgtggtg
acagactttgccaaatttgagcgaccaggacagcttcacctgggcttccaggctctacac
agctaccagaggaaacacagcaggctgcccaagccctggtgccaggctgatggagaggag
ttggtgtccctggctaaagaggttaactccagccagacggggtcagcaaaagtggaggag
ctggatgacaagctcattaagaaactggccttcgtctccgctggcgacctggcaccaata
aacgctttcattggtggactggccgcacaggaagtaatgaaggcgtgtacagggaagttc
atgcccatgatgcagtggctgtattttgatgctctggagtgtctgtctgaggaagaggga
ggagccatgctcactgaggaggactgtgcccctaggaacagtcgttatgacggccagatc
gctgtgtttggctcccagctgcaggaggtgctggctaaacaacgttacttcctggttggg
gctggcgctattggctgtgagctgctcaagaactttgccatgattggattggctggcgga
gagggtgaggtcatcgtgacagacatggacaccattgagaaatccaacctcaacagacag
ttcctcttcaggccgtgggacgtgacgaagatgaagagcgagacggcggcggcggcggtg
aagcagatgaacccgtccatccggatcacgggacaccagaaccgcgtcgggcccgagacg
gagcgcgtctacgatgacgacttcttcgagagcctccacggagtcgccaacgctctggac
aacgttgacgcgcgtatgtatatggaccggaggtgtgtctactacaggaagcccctgtta
gagtccgggactctgggcaccaagggaaacgttcaggtggtcatccccttcctgacagag
tcatacagctcctcccaggaccccccggagaagtccatccccatctgcacgctgaagaac
ttccccaacgccatcgaacacaccctgcagtgggcccgtgatgagtttgagggtctgttt
aaacagccgtcagagaatgctatgcagtacctcacagatgctaagttcctggagaggacc
ctgaagctgcctggagcccaacctctagaagtgttggaggccgtctataagagtttggtg
atcgactgccctcgcagctgggccgactgtgtcacctgggctcgccaccactggcagtgc
cagtacagcaacaacatccatcagctactgcacaacttccccccagaacagctgaccagc
tctggcgcccccttctggtccggtccaaagagatgtcctcaccctctggagttcagcacc
agcaatcaactccatatggactatgtgatgtcaggagccaacttatttgcccagtcgtac
ggcatgcagggctctaccgaccgtgccggcgtggctaagatcctggacagcctgtcggtg
cccaccttcgtccccaggtcaggggtcaagatccacgtctccgaccaggagctgcagagc
gccaacgtcaacgtcgatgacaacaggctagaggaactgaagactctgctgcctggaccg
gaagcttcttctcactttaaactcactgccatcgactttgagaaggatgatgactctaac
tttcacatggacttcattgtggctgcttccaacctgagagcagaaaactacaacattccc
cctgcagacagacacaagagtaagcttatagctgggaagatcattcctgcgatagcgacc
accacagcggcggtcgtaggtctggtctgtctggagctcatcaagatcgttcagggacac
aagaaggtggagtcgtttaagaacggcttcatgaacctggcgctgccgttcttcggcttc
tcagaacccatctctgctcccagccacaagtactatgagattgactggtctctgtgggat
cgttttgaggtgaagggtctgcaggccaatggagaggagatgactctccgacagttcctg
gactacttcaagaatgagcatcagttggagatcaccatgctgtctcagggagtctccatg
ctctactcctctcaccctgctgtcttcctcctctctctacgtctagaactgaccccgatg
acagagattgtgaccaaggtttctaagaagaagctggggaagcatgtgaaagctctggtg
tttgagctgtgctgcaacgacctgactgaggaagatgtggaggttcccntcgtcagatac
accatccgctga
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integrated database retrieval system
