Oncorhynchus keta (chum salmon): 127912974
Help
Entry
127912974 CDS
T09424
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 1-like
KO
K05720
FYVE, RhoGEF and PH domain containing 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
127912974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
FYVE_2
PH_11
RHG20_PH
PH_alsin
PH_2
zf-RING_5
PH_16
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
127912974
NCBI-ProteinID:
XP_052340125
LinkDB
All DBs
Position
28:complement(2475428..2510894)
Genome browser
AA seq
575 aa
AA seq
DB search
MMDLLPLTLPQTDRQDSTELSVQQRVFNIANELLHTEKAYVSRLYLLDQVFCSSLLEEAR
SRSSFPLDVVMGIFSNICSIYCFHQQFLLPALEKRMAEWDVNPRIGDILQKLAPFLKMYG
EYVKNFDRAMELVNTWMERSSQFKAIVHQIQREERCGNLTLQHHMLEPVQRIPRYELLLK
DYLHRLPDDHDDFQHAQKSLELIATAAEHSNTAIRKMERMRKLLKVYELLGGEEDIVNPT
NELIKEGHILKLSAKNGTSQDRYLILFNDRLLYCVPKLRLIGQKFGVRARINVDGMELKE
SSSVNVPRTFLVSGKQRSLELQARTEEEKKDWIQAIQATIQRHEQTLATFHHLNCSLRDE
DYTPPNSPNCSELGKRAPTPIREKEVTLCMKCQEPFNSITKRRHHCKACGHVVCGKCSEF
RARLLYDNNRANRVCIDCYTTLVGVPPSPASLTCSINRRRSILEVHNRILTAVEKGMLLD
LIYFHRDVKAQRSVPLIGFEVSLPESCDRLERRFAFKISQSHLTLYFSADGEELQRRWIE
VLSRAGRGEELQAHGSITEALEEEGEETATSGENT
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgatggatctgctgcctttgaccctgcctcaaacagacagacaggactctacggagctg
tcggtgcagcagcgtgtgttcaacatagccaatgagctcctccacacagagaaggcctac
gtgtctcggctgtacctcctggaccaggtgttctgctcctccctcctagaggaggcgcgc
tcccgctcctccttccctctagacgtggtcatgggtatcttctccaacatctgctctata
tactgtttccaccagcagttcctgctccccgccctggagaaacgcatggcggagtgggat
gtgaacccgcgcatcggggacatcctgcagaagctagccccctttctgaagatgtacgga
gagtacgtgaagaactttgaccgggccatggagctggtcaacacctggatggagaggtcg
tcccagttcaaagccatcgtccaccaaatccagagagaggagcgctgtggtaacctgacc
ctacagcaccacatgttggagccggttcagaggatccctcgctacgagctgctgctaaaa
gactacctgcaccgtctccctgacgaccatgatgactttcaacatgcacagaaatcacta
gagttgatcgccacagctgccgagcactccaacacagccatcagaaagatggagcgtatg
cgtaaactgctgaaggtgtatgagttgctgggaggagaggaggacatcgttaaccctact
aacgaactcatcaaggagggacacatcctcaaactgtcggctaagaacggcacctcacag
gacagatacctcatcctgttcaatgataggttattgtactgcgtccctaaactgaggctg
attggccagaagtttggggtgagagccaggatcaacgtggatgggatggagctgaaggag
agcagcagtgttaacgttcccaggaccttcctggtgtctggaaaacaacggtcactagaa
ctacaggccaggactgaagaagagaagaaggactggatccaggctatccaggccaccatt
cagagacatgaacagacgctagccacgttccaccatctcaactgctctctccgagatgag
gactacactcctcccaactcacctaattgttccgagctggggaagcgtgcccccactccg
atccgtgagaaggaggtgactctgtgtatgaagtgccaggagccgttcaactccatcacc
aagagacgtcaccactgcaaagcctgtggacacgtggtgtgtggaaagtgttcagagttc
agggcccgtctgctctacgacaacaacagggctaacagggtgtgcatcgactgctacaca
accctagtgggggttcccccctcccccgccagcctgacctgcagcataaacagacgacgg
tcaatactagaggtacataacaggatcctgactgccgtagaaaaagggatgcttctggat
ttgatctacttccacagggatgtgaaagcccagcgctctgtccctctgattggcttcgag
gtctcccttcctgagtcatgtgaccgcctggaacgccgctttgccttcaaaatcagccaa
tcacaccttacgctctacttcagcgccgacggggaggagctacagcgccgctggatagag
gtcctatcacgcgcagggagaggggaggagctacaggctcacggttcaattacagaggcc
ctagaggaggaaggggaggagactgcaacctcgggagagaatacatga
DBGET
integrated database retrieval system
