Oncorhynchus keta (chum salmon): 127913031
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Entry
127913031 CDS
T09424
Name
(RefSeq) tripartite motif-containing protein 55-like
KO
K10654
tripartite motif-containing protein 55
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127913031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
127913031
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127913031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
RING_XB3-XBAT31
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-RING_5
Sina_RING
DUF951
Motif
Other DBs
NCBI-GeneID:
127913031
NCBI-ProteinID:
XP_052340206
LinkDB
All DBs
Position
28:68102827..68110612
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AA seq
253 aa
AA seq
DB search
MFETNAWPLLCESFFICSICLETFTKTVVILPWQHNLCRKCANDIFQASNPYLPTRGGSV
TSGGRLRCTSCRNEVVLDRHGFYRLQRNRLVENIIDMFKQESTSSSRPAAPERTEEQAMC
QEHEEKEINIYCVTHSVPTCSMCKVFGAHQDCEVAPLKSMYQTQKTGLTDGIAMMVGNND
RIQGIISQLKETGQTIEVTGPVWQHLIGEASSTSHLDKVELGYEVMDHTTVNSWREGRAL
RNIDFISGRNSWQ
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaccaatgcatggccattgctgtgtgaaagctttttcatttgttccatctgc
ctggaaacatttaccaaaacagtggtcattttaccgtggcaacataacctttgtagaaag
tgtgccaatgatatctttcaggcctccaacccatacctcccaaccagaggggggtccgtg
acctccggtggccgtttacggtgcacgtcctgcaggaacgaggtggtgctggaccgccac
gggttctacaggctccagaggaaccggctggtggagaacatcatcgacatgttcaaacag
gagtccaccagcagctctaggccagcggccccagagaggacggaggagcaggccatgtgc
caagagcacgaggagaaggagatcaacatctactgtgtgacccacagcgtgcccacctgc
tccatgtgcaaggtgtttggagcccaccaggactgtgaggtggcgccgctcaaaagcatg
taccagacacagaagacggggttgactgacgggatagcgatgatggtggggaacaacgac
aggatccagggcatcatcagtcagttaaaggagaccggccagaccatagaggtgactggc
ccagtgtggcagcacctgattggggaggcgtcgagcacctcccacctggataaggtggag
cttggatatgaggtgatggatcacaccactgttaactcctggagagagggcagggctctg
cgtaacatcgacttcatctcaggtagaaatagttggcagtga
DBGET
integrated database retrieval system
