Oncorhynchus keta (chum salmon): 127913766
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Entry
127913766 CDS
T09424
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
127913766
Cell adhesion molecules [BR:
oke04515
]
Cadherins
Protocadherins
127913766
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
7TM_GPCR_Sri
Peptidase_S55
Motif
Other DBs
NCBI-GeneID:
127913766
NCBI-ProteinID:
XP_052342970
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All DBs
Position
30:complement(31295653..31298714)
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AA seq
816 aa
AA seq
DB search
MGDWCTTGRRGGWQVLFYILCLSALDSVTGQARYSIPEEQSEGSIVGNIGRDLGLEVKRL
VSGKARIIPKGARQYVDLNRDKGLLVVKERIDREELCGQTTPCSFSFELIIENPIQLYRV
TVEVRDINDNTPSFPKDEIKLEISESAVSGARFSIESALDPDVGVNGIQNYSLKPTDHFK
LEVHSQPDGVKYVEMILQNPLDREKQEALSLVLTATDGGEPQRSGNVHIDITVMDVNDNA
PVCGLPVYKANVNENSPVGTFVTTVSADDADQGVNGEVTFSIAHVAKEAKELFELNVETG
EIKVVGRLDFEKTKYYQLNVLAKDSGSLSDTCKVVIQITDENDNVPTIQLMSFSNSIPED
SPPGTTVAVINVEDADSEINGVVQCYINADFPFKIESSLTDYYTIVTDSTLDRETVSEYN
VTITVSDEGTPPLSSNKNITVKVSDVNDNPPKFDQPVYSKSIQENNSPGFSIFSVRASDA
DWGQNARVSYFLDDKQVNGVTASSFVSVNSENGAIHAVRSFDYEQIKSFQFNVTARDGGS
PPLSSVVAVRILVQDQNDNAPQVLYPVQTSSSLVAEMVPRSADVGYLVTKVVAVDVDSGQ
NAWLSYKLQKATDRALFEVGLQNGEIRTIRQVTDKDAVKQRLTVVVEDNGQPSRSATVNV
NVAVADSFPEVLSEFTDFTHDKEYNDNLTFYLVLALAVVSFLFITCLVVILSVKIYRWRQ
SRVLYHSNLPVIPYYPPRYADTLGTGTLQHVYNYEVCRTTDSRKSDCKFVRPCSQNVLIM
DPSSTGTMQRMQSENNILDEPDSPLEYLPYSLSVRE
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgggtgattggtgtacgacagggcgcagaggcgggtggcaagtactgttttacattctt
tgtctgagtgccctagattctgtaactgggcaggcacgatattccataccagaggagcag
tcagaggggtcgatcgttggaaacattggtagagatttgggtttggaggtgaagagacta
gtgtccggtaaagctcgcattataccaaaaggagcacgacagtatgtagatctgaaccga
gacaaagggctcctcgttgttaaagagagaatcgaccgagaggagctctgtggacagact
acgccttgtagcttcagctttgagcttatcatagaaaaccccattcagttatatcgagtt
acagtagaggttcgtgacattaacgataacaccccatcctttcccaaggatgaaatcaaa
ttggaaatcagtgaatctgccgtgtctggggcacgattttctattgagagcgccctcgac
cctgacgttggggtcaacggtatacagaattattcactaaaaccgacagatcattttaaa
ttagaggtacacagccaaccagatggagttaaatacgtcgagatgatcctgcaaaacccg
ttagatagggagaaacaggaggcgctttcgctggtgctgactgcgactgatggcggggag
cctcagagatctggcaatgtccacatcgatattactgtcatggatgtgaatgacaacgca
ccagtttgtggcctgcccgtttacaaagcgaatgtgaatgagaattcccctgttggtacg
tttgtaactaccgttagcgcagacgatgcagatcaaggggtgaatggagaggtcactttc
tccatcgctcatgttgctaaagaggcgaaggagctgttcgagctcaacgtggaaactgga
gagattaaggtggtaggcagactggattttgaaaagacaaaatattatcaattaaatgtt
ttggcaaaagatagtggtagcctctctgatacgtgcaaggttgttattcaaattactgat
gaaaatgacaacgttccaacaatacagcttatgtcattttcaaactcgattcctgaggac
tctccccctggaaccacagtagctgttattaatgtcgaagatgcagactctgaaattaac
ggtgttgtccagtgctatattaacgcagattttccgttcaaaatagagtcatcgttaacg
gattattatacaatagtcactgatagcacattggatagagaaaccgtgtctgagtacaac
gtcaccattacagtttcagatgaagggactccgcctctctccagcaataagaacataact
gttaaagtatcagatgtgaatgataacccacccaagtttgatcaacctgtatatagtaag
tctattcaggaaaacaattcgccagggttttctatattctcagtgagagcgagtgatgct
gactggggtcaaaatgcccgcgtctcctactttctcgatgataaacaagttaacggggtg
actgcttcctctttcgtctcagtaaattcagaaaatggcgccatccatgctgtcaggtca
ttcgattatgaacaaatcaagtcgtttcaattcaacgtcactgcccgtgatggagggtct
ccacctctcagttcagtggtcgctgttagaatattagtccaggaccagaatgacaacgcg
cctcaggttctgtatccagtccagactagcagctctctggtggctgaaatggtgcctcgt
tcagcagatgtgggatatcttgtcactaaagtggtggctgttgatgtggactctggacag
aatgcctggctctcgtataaactgcagaaagcgacagacagggcgctgtttgaagtgggc
ttacagaatggagaaataagaactatacgccaagtcactgataaagatgctgtgaaacaa
aggctcactgttgtagtggaggacaacgggcagccctctcgttcagctacagtcaatgtt
aacgtggcggtggcggacagcttccctgaagtgctctcggagttcactgactttacgcac
gacaaggagtacaatgacaacctgactttttacttagtcttggctttggctgtagtctca
tttctgttcatcacatgtttagtggttattttatcagtgaaaatatacagatggagacag
tctcgcgtcctctatcattccaatctcccggttattccgtattatccaccgcgttacgca
gacactttggggacaggaactctacagcacgtgtacaattacgaggtgtgcaggacgact
gactccagaaagagtgactgtaagttcgtcagaccctgtagtcagaacgtactgataatg
gaccccagttctacagggacgatgcagcggatgcagagtgaaaataacatcctggatgaa
ccagactctccactagagtacctcccatattccctcagtgtcagagagtga
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