Oncorhynchus keta (chum salmon): 127915001
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Entry
127915001 CDS
T09424
Symbol
tmtops2b
Name
(RefSeq) teleost multiple tissue opsin 2b
KO
K04256
c-opsin
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oke01009
]
127915001 (tmtops2b)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
oke04030
]
127915001 (tmtops2b)
Protein phosphatases and associated proteins [BR:
oke01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127915001 (tmtops2b)
G protein-coupled receptors [BR:
oke04030
]
Rhodopsin family
Vision
Opsin
127915001 (tmtops2b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
127915001
NCBI-ProteinID:
XP_052349126
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Position
34:complement(12521292..12602420)
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AA seq
380 aa
AA seq
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MFSDLAGLNYTYNVSDDPFSSLDREWRDAPKETLSRTGFIVLSVFLGLIMTFGFLNNFVV
LLLFCKFKTLRTPVNMLLLNISVSDMLVCTFGTTLSFTSSIKGKWLLGRHGCLWYGFINS
CFGIVSLISLVVLSYDRYSTLTVYNKRGPDYRKPLLAVGGSWLYSLIWTVPPLLGWSSYD
LEGAGTSCSVSWTLRTAQSHAYIICLFVFCLGLPIAIMVYCYCRLLWAVKQVGKIRKTAA
RRREHHILFMVLTTVVCYLLCWMPYGVVAMMATFGRPGIITPVAAVVPSLLAKSSTVINP
IIYILMNKQFYRCFLILFRCERRSTENGLSSMPSKTTVIQLNRRVYSNTVACTARVSTGI
HNHGCSTPATERNNPPEVTS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgttttctgatctggctggcctcaactacacctacaacgtgagcgacgacccgttcagt
tccctggaccgggagtggcgcgacgcgccgaaagagactctgtccaggactggcttcatc
gtgctctctgtgttcctgggcttgatcatgaccttcggcttcctcaacaacttcgtcgta
ctgcttctcttctgcaagtttaaaactctgcgtactccggtcaacatgctcctactcaac
atcagcgtgagcgacatgctggtgtgcacgttcggcaccacgctcagcttcacctccagt
atcaagggaaagtggctcctgggtcgccacggctgcttgtggtatggcttcatcaactcc
tgcttcggtatcgtgtcgttgatctccctggtggtcctttcatatgaccgctacagtacc
ctgactgtgtacaacaagcgtggtcctgactaccgcaagcccctgctggccgtggggggc
tcctggctgtactccctgatctggacggtgccccccctgctaggctggagtagctacgac
ctggagggggccggcaccagctgctccgtgtcctggaccctgaggacggctcagtcccac
gcctacatcatctgtctgttcgtcttctgcctgggcctgcccatcgccatcatggtctac
tgctactgtcggctactgtgggcagtcaaacaggtgggtaagatccgtaagactgcggca
cggcggagagagcaccacatcctgtttatggtgctgaccacagtggtgtgttatttactg
tgctggatgccctatggcgtggtggccatgatggccacattcggccggcccggcatcatc
acccccgtggccgccgtggtaccctccctcctggccaagagtagcacggtcatcaacccc
atcatctacatcctcatgaacaaacagttctacaggtgtttcctgatcctgttccggtgt
gaacggcgctccacagagaacggcctctcctccatgccctccaagaccaccgtcatccag
ctcaaccggcgtgtctacagcaacacggtggcgtgcaccgcccgggtctccactggtatc
cacaaccatggctgcagcaccccggccactgagcgcaacaaccctcccgaggtcacttcc
tga
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