Oncorhynchus keta (chum salmon): 127915011
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Entry
127915011 CDS
T09424
Name
(RefSeq) AF4/FMR2 family member 1-like
KO
K15195
AF4/FMR2 family member 3
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oke03021
]
127915011
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
127915011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
Motif
Other DBs
NCBI-GeneID:
127915011
NCBI-ProteinID:
XP_052349161
LinkDB
All DBs
Position
34:complement(13396515..13433922)
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AA seq
1407 aa
AA seq
DB search
MPTVLRGTGKLSIVCSLIRCASQDMTHSWPSQQPSGGSQAQRFPYNPKEAKQHTTQQTWE
NVQQLRMTQPHVAPHKSMLADDLKLSSDEEDADKDPEQSASWTGNNSLSEQHTHTHGGRV
RHSCSDSSGSDSSGSDSSSESEEESSSQRLRSPSPETHSNPGTPTDAQSLGCTEETDHPP
TTQWQLDKWLKKVRKKSSSWDSSNRDHTQRATEHSSPSPDPHRAPSPARSWGTREDYSPG
QSPVPSPHFNYSPSHSSRPSPGYSPCPSPCHSPRHSPILSPVPSVCLSPCLSPRANRDPS
PIPRHPPKSPSPSLTQSTSRHYPQVRSPHQESFRPLTRPSLTSSPSHRPKIRIAPAPSFE
SKSKLRHSSSPQPPLQHGSRPKPKQSQSVPTPKNTAKAAPALSTEPSHRPRPSPNSSPRL
HSQPRLKHNPILALKTSQQLTTSGQRPKESSRLSHNSNSKPRPKFGPSLTTSLSTSPSPT
PRAKTLPPAGPSRETSSRVGHSSKSSPKPHSRPISKAGSGPSSRSSPIPKVKSRENPAPH
PKPPQRKPHSREREREVDNRRETQAVDRKADRQAEGRGRGNVERQGERPGEKQGERRLAE
DKLIRRPWVQSSEEEEDVEERKRRREEREKEEKRRRRKEQQQQRGEWQAVQPKQRPHTNS
EQHRNPIDPQRHGTKKKRRRKSEEEERESQPDPSLPPSPSSPTPVIPPTDSSSSSSSSSE
SDSEPSLPPNVAKVPADSTSSQRPIPRRGHQGPGRPSDTRPGVLYPTATSNQAHGPQSQA
KQKLYTLVPFGRSEQAPSSHRGLRNLVVQLNLSLLSRVPDTTTDTPASHKHPSSSSSKQK
EAMRHLYTPETEGGDSRRKRKSENGIQHHRVSKRSNSQTNGPSAHTESTANRESKQSNSH
TNGPSAHTESTANRESKQSNSHTNGPSAHTESTANRESKQSNSRTNGPSAHTESTANRES
KQSNSRNNGPSAHTESTANRVSNRSNSQTNSPSAHTESTANRVSNRSNSQTNGPSAHTES
TANRESKQSNSQTNGPSAHTESTANRESKRSNSQTNGPSAHTANRCLDPHIDARHNRFLE
DYLDSKRPLSPLSPLSDTPDPTKPPIKTKPPVQHYTNSEVPRTHAKMEVECVGVSGKPPH
MCESWGPPLQRAGSQRGTVLNHEPPHHAEYYMHEAKRMKHRADAMVDKLGKAVNYVDAAL
SFMECGKAMEEGPLEDKSPYTMYTETVELIRYAMRLKNHSGPGARQEEKQLAVLCFRCLA
LLYWQMFRLKKDQAMKYSKALLDYFKSSPKVPTTPPIWSGSGKGTGGPPSSLSPSPSALP
LGSSPSSLINIPLRIHQMAANHLNITNNVLYSYEYWELAESLVRDNNEFFNYLNTLSGPL
TLHSSIAHAVQYTRQGLQWIRISASVG
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgcctacagtcctccgcggcacgggaaaactttccatcgtgtgttcactgattcgttgc
gcatctcaggacatgacccattcctggccatcccagcaaccctcaggagggagtcaggcc
cagcgcttcccctataaccctaaggaagcaaagcagcacacaactcagcaaacttgggag
aatgtgcagcagctgaggatgacccagcctcacgtggcgcctcacaaatccatgctcgct
gatgacttgaagctcagcagtgacgaggaggatgctgacaaggaccctgagcagtcagcc
tcctggactggtaacaatagtctgtcggaacagcacacacacacacatggtgggagggtg
agacattcatgctcagactcttcaggctcagactcttcaggctcagactcctccagtgag
tcggaagaggagagcagtagccagcgccttcgtagccccagcccagaaacacactccaat
ccggggacacccaccgacgctcagtccctcggctgcaccgaggagacagatcaccccccc
accactcaatggcagctggataagtggctgaagaaagtccgaaaaaaatcctcctcctgg
gattccagcaaccgtgaccacacccagagagctacagaacacagctcgccctccccagac
ccccacagagccccgtctccagccagatcctgggggaccagagaggactacagccccggc
cagagccctgttcccagcccacacttcaactacagccccagtcatagctctcggcctagc
cctggctacagcccctgtcccagtccttgccacagcccaagacacagccccatccttagc
ccggtccccagtgtctgtctgagtccctgcctcagccccagagccaaccgcgaccctagc
cccataccccgacacccccctaagagtcctagtcccagccttactcagtctacctcccgt
cactatcctcaggttcggagtcctcatcaggaaagcttcaggcctctcacgcggccgagc
ttaacatccagcccgagccatagacccaaaatcaggatcgcacctgctcccagctttgag
tccaagagcaaactgaggcacagttcctctccccagcctccacttcagcacggctccagg
cctaaacccaaacagagccaatctgttcccactcccaagaacacagccaaggcagcccct
gcgctgagcactgagccgagccacagacccagacctagtcccaactccagtcccaggctt
cattctcagcctaggttgaaacacaaccccatcctagcactcaaaaccagccaacaacta
acaacctctggacaaaggcccaaggagagtagcagactcagccacaattccaactccaaa
cccaggcccaagtttgggcctagtttgacaaccagcctcagtaccagtcccagtcccaca
cccagggccaagaccttacctcccgcaggccctagtagagagaccagcagcagagttggt
cacagttccaaatcgagtcccaagccacattctcggccgatctccaaagctggttctggg
cctagctctagatccagtcctatacccaaagtcaagtcccgggagaaccctgctccccac
ccaaagcctccacagaggaagccccattccagggagagagaacgggaggtggacaaccgg
agagagacccaggcagtagacaggaaggcagacaggcaggcagagggaagggggcggggt
aatgtagagagacagggagagaggccaggggagaaacagggagagagaagactggcagag
gataagttgattagacgcccctgggtccagagttcagaggaggaagaggacgtagaggag
agaaagaggaggagggaggagagagagaaggaggagaagaggaggaggaggaaggagcag
cagcagcagagaggtgaatggcaggcggtccagcccaagcagagacctcacaccaacagc
gagcaacaccgcaatcccattgatccacaacgccacgggactaagaaaaagaggaggagg
aagagtgaggaggaagagagagagtctcagccggacccttcccttccgccgtcgccctcc
tcccccacacctgtcatccctcccacagattcctcttcttcatcatcttcctcatcagag
tccgactcggagcccagtctgcctcccaacgtcgccaaagtcccagccgactccacgtcc
agccagcgtcccatccccaggagagggcaccagggccctggaaggccttcagacaccagg
ccaggagtgctctaccccactgccacatccaaccaagcccacgggccgcagagccaggca
aagcagaaactctacaccttggtcccgtttgggcgtagtgagcaagccccatcctcacac
cgaggcctgaggaatctggtggtgcagttaaacctctccctgctcagcagagtacctgat
actacgacagacaccccagcctctcacaaacacccctcctcttcctcttccaagcaaaaa
gaggccatgagacacctgtacaccccagagacagagggaggagacagcaggaggaaacgg
aagtcagagaatggaatccagcaccacagagtgagtaagcggagtaactcccaaaccaac
ggcccctcagcccacacagagtctacagctaacagagagagtaagcagagtaactcccac
accaacggcccctcagcccacacagagtctacagctaacagagagagtaagcagagtaac
tcccacaccaacggcccctcagcccacacagagtctacagctaacagagagagtaagcag
agtaactcccgcaccaacggcccctcagcccacacagagtctacagctaacagagagagt
aagcagagtaactcccgcaacaacggcccctcagcccacacagagtctacagctaacaga
gtgagtaatcggagtaactcccaaaccaacagcccctcagcccacacagagtctacagct
aacagagtgagtaatcggagtaactcccaaaccaacggcccctcagcccacacagagtct
acagctaacagagagagtaagcagagtaactcccaaaccaacggcccctcagcccacaca
gagtctacagctaacagagagagtaagcggagtaactcccaaaccaacggcccctcagcc
cacacagctaacagatgtctagacccccacatagatgccagacacaacaggttcttggag
gactacctagacagtaagaggccactgtcccccctgtcccctctctctgacaccccggac
cccaccaagcctcccatcaaaacaaagcccccagtgcagcactacacaaacagtgaggtg
cccaggacccatgctaagatggaggtggagtgtgtaggtgtgtcagggaagcccccgcac
atgtgtgaatcctggggacctcctttacaacgggcagggagccagagaggaactgtactc
aaccatgaacccccacatcatgctgagtactacatgcatgaggccaagagaatgaagcac
cgtgcagatgccatggtggataagctggggaaggcagtgaactatgtggatgctgctctc
tccttcatggagtgtggcaaagctatggaggagggaccactggaggacaagtcaccctat
accatgtacacagagacggtagagctcatcaggtatgccatgaggctgaagaaccactct
ggtcctggggccagacaggaagagaaacagttggccgtactgtgtttccggtgccttgct
ctcctgtactggcagatgtttcgtctgaagaaggaccaagccatgaagtactccaaagct
ctactggactactttaagagttctcccaaagtgcctactacaccccccatctggagcggc
tcaggaaagggcacaggggggcctccctcctctctctcccccagcccctcagccctcccc
ctgggcagctccccctcttccctcatcaacattcccctgcgtatccaccagatggcagca
aaccacctgaacatcaccaacaatgtcctatacagctatgagtactgggagctagcagaa
agcctggtcagagacaacaatgagttctttaactacctgaatacactttcagggccattg
actctccacagtagtattgctcatgcagtccagtacaccagacagggtctgcagtggatc
cgcatcagtgccagcgtgggctag
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integrated database retrieval system