Oncorhynchus keta (chum salmon): 127917098
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Entry
127917098 CDS
T09424
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03018
RNA degradation
oke03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127917098
09123 Folding, sorting and degradation
03018 RNA degradation
127917098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
127917098
03041 Spliceosome [BR:
oke03041
]
127917098
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127917098
mRNA degradation factors
5'-3' decay
Lsm complex
127917098
Spliceosome [BR:
oke03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
127917098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
127917098
NCBI-ProteinID:
XP_052356427
LinkDB
All DBs
Position
Unknown
AA seq
96 aa
AA seq
DB search
MSTALESYINRTVAIVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY
IVRGDNVAVIGEIDEDTDSSLDLGNIRAEPLNSIVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactgccctcgagagctacatcaaccgtacagtggccatcgttacatctgacgga
cggatgatagtgggcaccctgaagggctttgaccagaccatcaacctgattctggatgag
agtcatgagcgtgtgttcagttcctctcagggcgtggagcaggtggtcctgggactatac
atcgtcagaggagacaacgtagctgtgattggggagattgacgaggacacagattcttcg
ctggacctggggaacatccgcgctgaaccccttaactctatagtccactga
DBGET
integrated database retrieval system
