Oncorhynchus keta (chum salmon): 127918320
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Entry
127918320 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: semaphorin-6D-like
KO
K06842
semaphorin 6
Organism
oke
Oncorhynchus keta (chum salmon)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
127918320
NCBI-ProteinID:
XP_052357592
LinkDB
All DBs
Position
Unknown
AA seq
1070 aa
AA seq
DB search
MVWRAGLLLSILLATATHTMSASFPEDSIPLDAVDAHFSRQYPVFRGRPSGNESQHRLDF
QLMTKIQDTLFIAGRDQVYLVSLRESYRNEIIPYRKLTWRSGEADRKNCAMKGKHRDECH
NYIKVLVPRNDDLVFICGTNGFNPMCRYYRLDNLEFDGEEISGLARCPFDAKQTNVALFA
DGKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWLKEPHFLHAVDYGNYVYFFYRE
IAAEHNNLGKAVYSRVARICKNDVGGSQRVLEKHWTSFVKARLNCSVPGESFFYFDVLQS
ITDIININGVPSVVGVFTTQMNSIPGSAVCAFSMDDIETVFRGRFKEQKTPDSVWTAFPE
ERLPKPRPGCCAGHGQAESYKTSIEFPDETLLFIKSHPXMDSSVPNIGDEPWFTKTRVRY
RLTALAVDNAAGPHGNYTVLFIGSEAGVVLKVLAKTSPLSLNDSILLEEIDLFNRAKCLS
NSEDDRHILSLHVDRDTHSVYVAFSSCVVRMPLSRCERHTNCHKSCIASRDPYCGWMPHG
ACERILPGVLSGYEQDVEFGNTVQLGDCHVFLATTSATDYKSFGDPTSGVWEIQAGEANQ
MVHMNILISCVLAAFLLGALVAGLVVFCYRDSFLRHKPRHAHKDAESAPSCSDSTGSFAK
LNGLFDSPVKEYQPSLDCPKLYTNLLSSGKDLTPNGDTKTMILRDGSAPELAALPTPEST
PVLQQKGLQPIRNQWERANHHGKINGSRKNSNSTSSSIAKSPQFHPSSPPPHPQPHPHPA
LGHSHIPSAVVLPNATHEYRSGYHGNPTDDVTPPRTLDRKPENMEHLQATPPHSKGSRKE
QKRSLDARNTLNDLLKHLNDANTANASSKAILQEGAGSAPRPSRQHLMLEPLGDITEVPP
KVPSREASLYSPSSSSSLPRHSPTKRVDVPLPSTPSSPTGSLGMGGSMSGTLERRYGSHH
RISSHRHSLTATSPNGVSMGVSLSHQHSMNRGGYMPPTPPSRLDSQRGLHSPHQHPHPPS
LSRQSSYSGHGSLPRQGLKRTPSLKPDVPPKPNAFTPQTPQMRVVNKYSY
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggtttggagagcaggccttctgctcagcatactgctagctacagccacacacaccatg
tctgccagcttcccagaggacagtatacccctggacgctgtcgatgcacacttctcgcgg
cagtacccagtgttccgaggtcgtccgtcggggaacgagtcacagcacagactggacttc
caactgatgaccaagatacaggatacactgttcatcgctggaagagaccaggtgtatcta
gtgagtctccgagaatcctacaggaatgagatcattccctacaggaagttaacatggagg
tcaggcgaggcagacagaaagaactgtgccatgaaggggaaacacagagatgagtgtcat
aactacatcaaggttctggttcccagaaatgatgacctggtgttcatctgtggaacaaac
ggcttcaaccccatgtgccggtactacaggctggataacctggagtttgatggggaggaa
atcagcggactagcacgatgcccgtttgacgccaagcagaccaacgtcgctctgttcgct
gacgggaagctgtactcggcaacggttgctgacttcctggcgagcgacgcagtgatctat
cgtagtatgggtgacggctcggccctcaggactatcaaatacgactccaaatggctgaaa
gagccccatttcctgcatgcagtggattatgggaactatgtctacttcttctacagagag
atcgcagcagaacacaacaacttgggcaaggccgtctactccagagtggctcgtatctgt
aagaacgacgtaggcgggtctcagcgtgtgttggagaaacactggacgtccttcgtcaag
gccagactcaactgttctgttcctggagaatcgttcttctacttcgatgttctacagtcc
atcactgacatcatcaacatcaacggagttccttctgtggtgggagtcttcactacacag
atgaacagtatcccagggtctgcagtgtgtgcgttctccatggatgatatagagacggtg
ttcagaggacgatttaaagaacagaaaacacctgactctgtctggaccgccttcccagag
gagagactgcccaaacccaggccaggctgctgtgcgggtcacggccaggctgagtcctat
aagacctctatagagttccctgatgagaccctcctcttcatcaagtctcaccccntcatg
gactcctccgtgcctaacataggagacgagccctggttcaccaagacacgcgtcaggtac
aggctgacagccctggcggtggacaacgcggctggtccacatggtaactacacggtgctg
ttcattggttcagaggcgggcgtggtgctgaaggttctagccaagacttcccctctgtcc
ctaaacgacagcatcctattggaggagattgacctgttcaacagagccaagtgtctgtct
aacagtgaggatgacaggcatattttgtcgctccatgttgacagagacacacacagtgtg
tatgtagctttctctagctgtgtggttcgcatgcctctcagccgctgtgagcgacacact
aactgccacaagtcttgtatagcgtccagggacccctactgtggctggatgcctcatgga
gcctgtgagaggatcctgcctggagttctgtctggttatgagcaggatgtagagtttggg
aacacggttcagctgggagactgccatgtgtttttggccactacatcagcgacagattac
aaatcatttggtgacccgacctctggtgtgtgggagatccaggcgggagaagccaatcag
atggtccacatgaatatcctgatcagctgtgtgttggctgccttcctcctgggggcgcta
gtggccggcctggtggtgttctgctacagagactccttcctccgccacaagccccggcac
gcccacaaagatgcagagtcagccccctcctgcagcgactccaccggatccttcgctaag
ctcaacgggctcttcgacagtcctgtcaaggagtaccagccaagtctggactgtcccaag
ctgtacaccaacttactgagcagtggtaaggacctgacgcctaacggagacaccaagacc
atgatcctccgggacggctcagccccggagctggccgccctgcccacccccgagtctacc
cctgtgctgcagcagaaaggcctgcagccaatcaggaaccaatgggagcgagccaatcac
cacgggaagatcaacggatccaggaagaactccaactctacctcctcctccattgccaag
agtccccagttccaccccagttcccccccccctcacccccagccccacccccaccctgcg
ctgggacactcccacatccccagcgccgtcgtccttcccaacgccacgcacgaataccgc
agtggttaccatggaaacccgaccgacgacgtcacgccgccgcgcaccctggacaggaag
ccagagaacatggaacacctgcaggccacgccccctcattctaaaggaagcaggaaagag
cagaagaggtcgctggatgccaggaacacactgaacgacctgctgaagcacctgaacgat
gctaacacggctaatgctagctccaaggctatcctccaagagggggccggctcagcgccc
cgacccagcagacaacacctgatgctggagcctctaggggacatcactgaggttcccccc
aaggtccccagccgagaggcctctctttactccccctcctcctcctcatccctgcccagg
cacagccccaccaagagggtagacgtcccactgccctccacccctagctcccccacaggc
agcctgggtatgggaggaagcatgagcggcaccctggagaggaggtacggctctcatcac
aggatctcttctcacagacactccctcaccgccacctctcccaacggggtcagtatgggg
gtgtcgttgtcccaccaacacagtatgaacagaggggggtacatgccccccacccctccc
tccagactggactcccagagggggcttcactccccccatcaacacccccaccccccctcc
ctgtcccgccagagcagctacagtgggcacggctcgctcccccgccaggggcttaaacga
accccgtccctaaagcctgacgtcccccctaaacccaacgccttcaccccacagactcct
cagatgagggtggtcaacaagtacagctactag
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integrated database retrieval system
