Oncorhynchus keta (chum salmon): 127919255
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Entry
127919255 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oke04054
]
127919255
Pattern recognition receptors [BR:
oke04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127919255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
PRY
NOD2_WH
SPRY
LRR_6
PYRIN
LRR_4
Motif
Other DBs
NCBI-GeneID:
127919255
NCBI-ProteinID:
XP_052358694
LinkDB
All DBs
Position
Unknown
AA seq
1067 aa
AA seq
DB search
MSLSGEHGTKAKRPIKQERPASPVPSCVSMKSDKSMNPPIEFREGDFSTEQRNQQERSES
EILSGQSSQSHQTDLASIFSMLEEKIMTFVKNELKIFKRILSPELPEGFESQKQDKEVVD
AEDEKQESSAREGALKITLHVLRKMNQMELADTLEKNDLAVICQRELKSNLKKKFQCVFE
GIAKQGNPTLLNKIYTELYITEGGTGEVNNEHELRQIETTTRKQARPETAIKCNDIFKPL
TGQDKPIRTVLTKGVAGIGKTVSVQKFILDWAEGKANQDVQFVFSFPFRELNLMKEDKHT
LIELLNHFSMESKVSRISNYNKYKVLFIFDGLDECRLPXDFQKNKICCDVTESTSVDVLL
TNLIKGNLLPSALLWITTRPAAANKIPSGCVDQVTEVRGFNDPQKEEYFRKRFSDEDMAS
RIISHIKTSRSLHIMCHIPVFCWISATVLEQMLKHKREEMPKTLTEMYTHLVVFHTKQKN
EKYLGKEETGPHWNKESILSLGKLAFQQLVKGNLIFYEEDLNEAGIDVNEASVYSGLCTQ
LFKEECGLYQDKVYCFVHLSIQEFLAAVYVFLSFINNNENLMAKTQSTSRNFSLRIKQRR
KVTVYKPEVTVYKSAVDKALQSETGNLDLFLRFLLGLSLESNQKHLRGLLTKTRSSSQSH
EETVKYIKEKIREDLSPERCINLFHCLNELNDHSLVEEIQSFLRSGSLSRAKLSPAQWSA
LVFVLLTSEKELDVFDLKKYSRSEEGLLRLLPVVKASRAALLSGCGVTEEGCASLVSVLR
SNPSHLRELDLSNNDLKDSGVKLLSAGLGNPHCKLETLRLSGCLVTEEGCASLVSALESN
PSHLRELDLSYNHPGDSGVRLLSAGLEDPHCRLEKLNVEHGGENRMEPGLRKYVCDLTLD
LNTVNRLLSLSEENRKVTCRREKQPYPDHPERFEDWRQVLCREGLTGCCYWEVEWSGREA
DIGVTYKGISRRGGVNDCCLGYNDKSWSLYCSDNSYAAWHNNKPTTIDVPSSSSHRVGVY
LDWPAGTLSFYRASSDTLTHLITFTSTFTEPLYPGFGVYYASSVSLK
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgagtctctctggtgaacatggcaccaaagctaagagaccaatcaagcaggagagacca
gcctcccctgttcccagctgtgtgtccatgaagagtgacaagtctatgaatcctcctata
gagtttagagagggagacttttctactgaacaaagaaaccaacaggagagatcagagtca
gagattctcagtggtcagtcttcccagagtcatcaaacagacctggcctccatattcagt
atgcttgaagagaaaattatgacatttgtgaagaacgagctgaagatattcaagaggatt
cttagtccagaactcccagaaggctttgagagtcagaagcaggataaggaagtggtggat
gctgaagatgagaagcaggagagcagtgccagagagggggctctgaagatcacactgcac
gtcctgaggaaaatgaaccagatggagcttgctgacacactggagaaaaatgatcttgct
gtgatttgccaacgtgaactcaaatctaatctaaagaagaagtttcaatgtgtatttgag
gggatcgcgaaacaaggaaacccaacacttctcaataagatctacacagagctctacatc
acagagggtggaacaggagaggtcaataatgaacatgagctgagacagattgagacaaca
accaggaaacaagcaagaccagaaactgcaatcaaatgtaacgacatcttcaaaccctta
actggacaagataaacctatcagaactgtgctgacaaagggagtcgctggcattggaaaa
acagtctctgtgcagaagttcattctggactgggctgaaggaaaagcaaatcaggatgtc
caatttgtattttcattcccttttcgggagctgaatttgatgaaagaggacaaacacact
ttaattgaacttcttaatcacttctcaatggaaagcaaagtttcaagaatctccaactac
aacaagtacaaagttctgttcatctttgatggtctggatgagtgccgactgcccntagac
ttccagaagaacaagatctgttgtgacgtcacagagtcaacctcagtggatgttctgctg
acaaatctcatcaagggaaatctgcttccctctgctctcctctggataactacccgacct
gcagcagccaataagatcccttcagggtgtgttgaccaggtgacagaggtacgaggtttc
aatgacccacagaaggaggagtacttcaggaagagattcagtgatgaggacatggccagc
agaatcatctcacacataaagacatcaaggagcctccacatcatgtgccacattccagtc
ttctgttggatttctgcaacagtccttgaacagatgctgaaacataagagagaagagatg
cccaagactctgactgagatgtacacacaccttgtggtgtttcataccaaacagaagaat
gaaaagtatcttgggaaagaagagacaggtccacactggaataaagagagcattctgtca
ctgggaaagctggcttttcaacagcttgtgaagggcaatctgattttctatgaagaagac
ctgaacgaggctggcattgatgtcaatgaagcctcagtgtactcaggattgtgcacacag
ctctttaaagaggaatgtgggctgtaccaggacaaggtgtactgctttgttcatctgagc
attcaggagtttctggctgctgtatatgtgttcctctcattcatcaacaacaatgagaat
ctaatggccaaaacacaatcaacgtccaggaacttttctttgaggatcaaacaaaggcgt
aaagttactgtctacaagcctgaagttactgtctacaagagtgctgtggataaagcttta
caaagtgagacgggaaacctggaccttttcctccgcttccttctgggcctctcactggag
tccaatcagaagcacttacgaggtctactgacaaagacaagaagcagctcacaaagccat
gaagaaacagttaagtacatcaaggagaagatcagggaggatctctccccagagaggtgc
atcaatctgttccactgtctgaatgaactgaatgaccattctctagtggaggagatccaa
agcttcctgagatcaggaagtctctctagagccaaactgtcacctgcacagtggtcagct
ctggtctttgtgttgctgacatcagaaaaggagctggatgtgtttgacctgaagaaatac
tccagatcagaggaaggtcttctgaggctgctgccagtggtcaaagcctccagagctgct
ctgctgtccggctgtggagtcacagaggaaggctgtgcttctctggtctcagttctgagg
tcaaacccctcacacctgagagagctggatctgagtaataatgacctgaaggattcagga
gtgaagctgctctctgctggactggggaatccccactgtaaactggagactctgaggctg
tcaggctgtctagtcacagaggaaggctgtgcttctctggtctcagctctggagtcaaac
ccctcacacctgagagagctggacctgagctacaatcacccaggagactcaggtgtcaga
ctgctctctgctggactggaggatccacactgcagactggagaaactcaatgtggaacac
ggtggagagaacagaatggaacctgggctcagaaaatatgtctgtgatctcacactggac
ctaaacacagtaaacagactcctctctctgtctgaggagaacagaaaggtgacatgtagg
agagagaagcagccgtatcctgatcacccagagagatttgaggactggagacaggttctg
tgtagagagggtctgactgggtgctgttactgggaggtagagtggagtgggagagaggct
gatataggagtgacatataaaggaatcagcaggagaggaggggttaacgactgttgtctt
ggatacaatgacaagtcctggagtctgtactgctctgacaacagttacgctgcctggcac
aataataaacccactaccatagacgtcccctcctccagctcccacagagtaggagtgtat
ctggactggccagccggcactctgtccttctatagagcctcctctgacacactgacccac
ctgatcacattcacctccacattcactgaacccctctatccagggtttggggtttattat
gcctcctcagtgtccctaaaataa
DBGET
integrated database retrieval system
