Oncorhynchus keta (chum salmon): 127919307
Help
Entry
127919307 CDS
T09424
Name
(RefSeq) NLR family CARD domain-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oke04054
]
127919307
Pattern recognition receptors [BR:
oke04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127919307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
PRY
WHD_NOD2
SPRY
LRR_6
PYRIN
DUF7639
Motif
Other DBs
NCBI-GeneID:
127919307
NCBI-ProteinID:
XP_052358768
LinkDB
All DBs
Position
Unknown
AA seq
1161 aa
AA seq
DB search
MKSDWSMEPPISFREGDFSTEQRPIKQERPASPVPSCGSMKSDRSMEHPINFREEDFSTE
QRPIKQERPASPVPSCVSMKSDKSMHQPLSFKKGDISTEQSPIKQERPASPVPSCVSMKS
DRSMSQPIQFGKEGLDRPINFREGDFSTEQRNQQERSESEILSGQSSQSHQTDLASIFSL
LEEKILTFVKNELKMFKRILSPELPEGFESQKQDKEVVDAEDEKQESSAREGALKITLHI
LRKMNQKELADTLEKYSDDLAVIFQRELKSNLKKKFQCVFEGIAKQGNPTLLNKIYTELY
ITEGGTGEVNNEHELRQIETTTRKQARPETAIKCNDIFKPLTGQDKPIRTVLTKGVAGIG
KTVSVQKFILDWAEGKANQDVQFIFSFPFRELNLMKEDKHTFIKLLNHFSMETKQSRISN
YNKYKVLFIFDGLDECRLPLDFQNNKICWDVSESTSVDVLLTNLIKGNLLPSALLWITTR
PAAANKIPSACVDQVTEVRGFNDPQKEEYFRKRFSDEDLASRIISHIKTSRSLHIMCHIP
VFCWISATVLEHMLKHKREEMPKTLTEMYTHLVEFHTKQKNEKYLGKEETGPHWNKESIL
SLGKLAFQQLVNGNLIFYEEDLKEAGIGVNEASVYSGLCTELFKEECVLYQDKVYCFVHL
SIQEFLAAVYVFLSFNNNNENLMDKLQTSDKSEVTFYKSAVDKALQSETGNLDLFLRFLL
GLSLESNQKHLQGLLTKSRSSSQSHEETVKYIKEKIRENPSPERSINLFHCLNELNDHSL
VEEIQSYLRSGSLSKPFLSPAQWSALVFVLLTSEKELDVFDLKKYSRSEEGLLRLLPVVK
ASRAVLLSGCLVTEEGCASLVSALESNPSHLRELDLSNNDLKDSGVKLLSAGLGNPHCKL
ETLRLSRCLVTEEGCASLVSALRSNPSHLRELDLSYNHPGDSGVRLLSARLEDPHCRLEK
LNVEHGGEYTMKPGLRKYVCDLTLDLNTVNRLLSLSEENRKVTCRTEEQPYPDHPERFED
CGQVLCREGLTGRCYWEVEWSGRRADIGVTYKGIRRRGGVKDCYLGWNDKSWSLNCSDNS
YIAWHNNNPTTIDVPSSSPHRVGVYLDWPAGTLSFYRVYSDTLTHLITFTSTFTEPLYPG
IHIWYDGDSVSLCQTQHDVSL
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtgactggtctatggaacctcctatatcctttagagagggagacttttctact
gaacaaagaccaatcaagcaggagagaccagcctcccctgttcccagctgtgggtccatg
aagagtgaccggtctatggaacatccgataaactttagagaggaagacttttctactgaa
caaagaccaatcaagcaggagagaccagcctcccctgttcccagctgtgtgtccatgaag
agtgacaagtctatgcatcaacctctaagctttaaaaagggagacatttctactgaacaa
agcccaatcaagcaggagagaccagcctcccctgttcccagctgtgtgtccatgaagagt
gaccggtctatgagtcaacctatacagtttggaaaggaaggcttggatcgtcctataaac
tttagagagggagacttttctactgaacaaagaaaccaacaggagagatcagagtcagag
attctcagtggtcagtcttcccagagtcatcaaacagacctggcctccatattcagtttg
cttgaagagaaaattctgacatttgtgaagaacgagctgaagatgttcaagaggattctt
agtccagaactcccagaaggctttgagagtcagaagcaggataaggaagtggtggatgct
gaagatgagaagcaggagagcagtgccagagagggggctctgaagatcacactgcacatc
ctgaggaaaatgaaccagaaggagcttgctgacacactggagaaatattcagatgatctt
gctgtgattttccaacgtgaactcaaatctaatctaaagaagaagtttcaatgtgtattt
gaggggatcgctaaacaaggaaacccaacacttctcaataagatctacacagagctctac
atcacagagggtggaacaggagaggtcaataatgaacatgagctgagacagattgagaca
acaaccaggaaacaagcaagaccagagactgcaatcaaatgtaacgacatcttcaaaccc
ttaactggacaagacaaacctatcagaactgtgctgacaaagggagtcgctggcattgga
aaaacagtctctgtgcagaagttcattctggactgggctgaaggaaaagcaaatcaggat
gtccaatttatattttcattcccttttcgggagctgaatttgatgaaagaggacaaacac
actttcattaaacttctcaatcacttctcaatggaaaccaaacaatcaagaatctccaac
tacaacaagtacaaagttctgttcatctttgatggtctggatgagtgccgactgccccta
gacttccagaacaacaagatctgttgggacgtctcagagtcaacctcagtggatgttctg
ctgacaaatctcatcaagggaaatctgcttccctctgctctcctctggataactacccga
cctgcagcagccaataagatcccttcagcgtgtgttgaccaggtgacagaggtacgaggg
ttcaatgacccacagaaggaggagtacttcaggaagagattcagtgatgaggacctggcc
agcagaatcatctcacacatcaagacatcaaggagcctccacatcatgtgccacattcca
gtcttctgttggatttctgcaacagtccttgaacacatgctgaaacataagagagaagag
atgcccaagactctgactgagatgtacacacaccttgtggagtttcataccaaacagaag
aatgaaaagtatcttgggaaagaagagacaggtccacactggaataaagagagcattctg
tcactgggaaaactggcttttcaacagcttgtgaatggcaatctgattttctatgaagaa
gacctgaaagaggctggcattggtgtcaatgaagcctcagtgtactcaggattgtgcaca
gagctctttaaagaggaatgtgtgctataccaggacaaggtgtactgcttcgtgcatctg
agcattcaggagtttctggctgctgtatatgtgttcctctcattcaacaacaacaatgag
aatctaatggacaaactgcaaacaagtgacaagtctgaagttactttctacaagagtgct
gtggataaagccttacaaagtgagacgggaaacctggaccttttcctccgcttccttctg
ggcctctcactggagtccaatcagaagcacttacaaggtctactgacaaagtcaagaagc
agctcacagagccatgaagaaacagtcaagtacatcaaggagaagatcagggagaatccc
tctccagagaggagcatcaatctgttccactgtctgaatgaactgaatgaccattctcta
gtggaggagatccaaagctacctgagatcaggaagtctctcaaaacccttcctgtcacct
gcacagtggtcagctctggtctttgtgttgctgacttcagaaaaggagctggatgtgttt
gacctgaagaaatactccagatcagaggaaggtcttctgaggctgctgccagtggtcaaa
gcctccagagctgttctgctgtcaggctgtctagtcacagaggaaggctgtgcttctctg
gtctcagctctggagtcaaacccctcacacctgagagagctggacctgagtaacaatgac
ctgaaggattcaggagtgaagctgctctctgctggactggggaatccccactgtaaactg
gagactctgaggctgtcacgctgtctagtcacagaggaaggctgtgcttctctggtctca
gctctgaggtcaaacccctcacacctgagagagctggacctgagctacaatcacccagga
gactcaggagtcagactgctctctgctagactggaggatccacactgcagactggagaaa
ctcaatgtggaacatggtggagagtacacaatgaaacctgggcttagaaaatatgtctgt
gatctcacactggacctaaacacagtaaacagactcctctctctgtctgaggagaacaga
aaggtgacatgtaggacagaggagcagccgtatcctgatcacccagagagatttgaggac
tgtggacaggtgctgtgtagagagggtctgactgggcgctgttactgggaggtagagtgg
agtgggagaagggctgatataggagtgacatataaaggaatcagaaggagaggaggggtt
aaggactgttatcttggatggaatgacaagtcctggagtctgaactgctctgacaacagt
tacattgcctggcacaataataatcccactaccatagacgtcccctcctccagcccccac
agagtaggagtgtatctggactggccagccggcactctgtccttctacagagtctactct
gacacactgacccacctgatcacattcacctccacattcactgagcccctatatccaggg
attcatatttggtatgatggtgactcagtgtctctgtgtcaaacacaacatgatgtttca
ctctaa
DBGET
integrated database retrieval system
